FFCP PHASE1:Mm9::chr15:6658372..6658396,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78757 | |EntrezGene=78757 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=614 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QI06,Q0VAV3,Q8CB99,Q9D2K3,Q8C2V9,Q8R5D5 | |UniProt=Q6QI06,Q0VAV3,Q8CB99,Q9D2K3,Q8C2V9,Q8R5D5 | ||
|association_with_transcript=0bp_to_ENSMUST00000061656,ENSMUST00000168540,NM_030168,uc007vdn.2,uc007vdo.2,uc007vdp.2,uc007vdq.2,uc007vdr.2,uc011zrb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061656,ENSMUST00000168540,NM_030168,uc007vdn.2,uc007vdo.2,uc007vdp.2,uc007vdq.2,uc007vdr.2,uc011zrb.1_5end | ||
|cluster_id=chr15:6658372..6658396,+ | |||
|description=CAGE_peak_1_at_Rictor_5end | |description=CAGE_peak_1_at_Rictor_5end | ||
|id=chr15:6658372..6658396,+ | |id=chr15:6658372..6658396,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.70e-08!42;UBERON:0000065!1.02e-07!41;UBERON:0004177!1.34e-07!29;UBERON:0003408!4.79e-07!24;UBERON:0006562!5.32e-07!24;UBERON:0001557!5.32e-07!24;UBERON:0001042!5.32e-07!24;UBERON:0008814!5.32e-07!24;UBERON:0009145!5.32e-07!24;UBERON:0002370!8.49e-07!23;UBERON:0000974!8.49e-07!23;UBERON:0004807!8.49e-07!23;UBERON:0005058!8.49e-07!23;UBERON:0003351!8.49e-07!23;UBERON:0009113!8.49e-07!23;UBERON:0003295!8.49e-07!23;UBERON:0009722!8.49e-07!23;UBERON:0005562!8.49e-07!23;UBERON:0007690!8.49e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.70e-08,42;UBERON:0000077,6.98e-08,35;UBERON:0000065,1.02e-07,41;UBERON:0004177,1.34e-07,29;UBERON:0005057,1.34e-07,29;UBERON:0000153,2.87e-07,43;UBERON:0007811,2.88e-07,36;UBERON:0003408,4.79e-07,24;UBERON:0006562,5.32e-07,24;UBERON:0001557,5.32e-07,24;UBERON:0001042,5.32e-07,24;UBERON:0008814,5.32e-07,24;UBERON:0009145,5.32e-07,24;UBERON:0002370,8.49e-07,23;UBERON:0000974,8.49e-07,23;UBERON:0004807,8.49e-07,23;UBERON:0005058,8.49e-07,23;UBERON:0003351,8.49e-07,23;UBERON:0009113,8.49e-07,23;UBERON:0003295,8.49e-07,23;UBERON:0009722,8.49e-07,23;UBERON:0005562,8.49e-07,23;UBERON:0007690,8.49e-07,23;UBERON:0001041,9.26e-07,80 | |||
|phase1_expression=27.0651551607102,25.4752047576734,28.2099528421512,19.3577095236371,28.5510566069418,23.5030980676646,15.1848216387092,59.9132220768914,113.757287498547,125.224521582267,40.4074405012192,39.5669908616869,85.4291642356717,93.1027285762322,35.6427445142759,48.3915889061684,48.9693314689703,66.7202479732673,63.7582116266685,50.9267582157636,38.1844372778303,23.4326644834089,22.9855814442263,19.5190755807956,14.9116032693661,17.2269589234506,9.47676391549965,18.3150547783006,22.2327400763957,17.8941392129551,19.0688239163562,18.4158895303293,27.6779154413057,31.6963362030877,23.108129580102,15.2935873729813,21.4377824075488,58.1758966724302,38.2854318816662,64.3934205087772,41.764435650202,45.7640474922159,56.3192009516138,41.0423626600382,45.315488255123,39.6460984669232,12.5182615095686,6.1047043786525,4.83309602015838,10.304784650937,11.3389001516544,5.75010257459886,58.55612951415,83.4166463313046,101.164233541882,19.551717138732,25.2149427146106,21.1425557833751,27.1104057551861,21.6886301501533,17.1134478946668,19.9918273920788,16.0073063300005,4.04954872776629,3.9554654502679,7.8152812644071,6.2916023208865,7.68436610643109,27.6851264863635,14.850653216486,21.8737959805437,12.5686433137674,13.0312439161452,25.2331046382805,17.7314121383737,16.5459381589804,33.0347642998166,33.4540825783192,36.5583549149859,21.101806036831,16.5592634920361,30.2129754922921,19.5428099300967,31.5147061617741,31.6292372897997,27.9897156199984,31.3217697758026,31.1287074528252,23.9294770932862,28.188191919831,48.6972341018819,18.9293252935905,19.7191686775248,13.4925797909454,32.4888208723835,38.0822854032735,22.7519960613438,19.5994870964766,20.2633083590238,12.3668851078619,25.9151892389092,33.3648841277226,17.8363667794652,0,17.3192832808971,20.2687892380079,16.6823066854878,25.8055568165076,104.35196710981,34.735460541169,17.1750473498474,17.354532263792,16.6043158024362,20.1968338340514,37.5107975762898,16.3366568728578,81.5743393523434,37.3066340853372,33.6152009740952,23.1326595424795,29.8136049921531,38.3051449976825,14.9113408974498,83.4425271482909,76.866941400538,24.7793343552334,54.6356967746996,25.7958174327165,46.6347733358147,52.5765144310928,41.632554856495,34.5549468310377,53.3640662990289,48.5859368927628,33.8694512632083,46.2387599743109,35.0327411645088,39.8102305952298,29.3158399783063,49.6642779892079,26.9349316932797,25.749035696549,30.0703756774933,37.525499641093,50.9593378643446,49.451896029952,45.3516346869088,52.2580808892812,28.8861110530009,41.6033376369202,39.7649540610524,20.604398848192,38.6485676423581,34.8252166522167,34.5713989165345,28.262865888226,23.87524836865,28.3082697826187,21.0280989552739,26.3049731120087,26.9704968978261,29.8903022025285,30.5400708904921,25.3825858954151,32.7046279321242,26.0438018120457,24.9494263301646,35.7301947643539,26.8232555358973,33.6543301362145,30.0765283415125,25.8773977742838,32.2738669477844,26.3044580770329,53.2033569867242,38.3834204174731,29.407271685558,20.6271441997565,32.2065258308203,31.8164240448801,34.536479634321,31.6643133658648,29.7986578752126,24.5391057685201,21.353807769503,23.5519505255336,30.1602250560323,29.8434708061726,28.0748285451533,24.268124033664,28.3140845335849,31.8626037206988,11.7594098590911,29.933110303749,29.3040112750009,30.9550018324878,26.3775382547971,36.4706263429657,33.7050742872291,31.8837919635941,31.5567442961163,28.8749363577013,27.2736416920177,29.6984288174647,33.8081471594709,34.8536274196523,33.471920029103,40.0354085189012,32.0828573244589,30.2080944323351,55.125977103512,32.9473695825698,34.5043695665651,41.3076451912039,27.4593152340813,29.5517287198121,34.4443033962071,31.3588288886189,59.1210208533135,20.4650724712124,33.2448551941733,26.9894686382549,36.6116787330063,53.9370148962647,48.0848154589748,48.7834119644497,52.807773275574,55.8091017914913,50.2282521271084,44.2430949732493,49.3879048136461,50.6271705035291,21.1107797514981,15.2293591469239,18.1952781017043,29.8011686009111,46.8807722764353,48.7600616223565,15.4098848654075,26.2569764292548,23.0321000173867,23.4263246577983,28.2204651029967,25.091723785018,30.9690156974528,39.6307143104365,24.6934528021686,25.7185154961954,32.0183100136684,48.8408400961147,37.8980027506077,20.8336756290689,46.097009497062,45.2018136944747,35.84118735179,22.5785991624133,21.1626489875326,23.0098197302196,18.6040192514887,21.5204603560749,24.8091161441492,29.0826983582004,28.5197902707777,28.7593449721593,22.1379078007497,20.6271086496374,44.2571487479924,25.568675352446,11.5129228566652,23.7914108885067,32.8079432238206,28.0039043635251,33.5680002028327,17.0500371504176,33.3233825450469,36.4351161885771,27.1249929607603,39.5727007059552,50.8612944092102,39.5652787528702,33.3048839768751,39.5579568385598,29.4395644996149,45.9854748986064,36.3954976099426,26.8302928352189,36.6685164192029,45.2084296811258,50.0300873458952,49.1873072394024,69.5211778674868,68.1563572816214,64.6775877404703,11.4560474161814,28.6284074190927,34.7676288786911,32.617612928184,31.1541561061558,27.9504081595107,31.0187996685088,34.7144514046411,21.9874991266585,29.1633689906534,41.629733976824,19.1655599152625,36.3325206886868,28.4588603586208,31.5010925117357,28.5443209885786,35.818698604045,51.2851132881945,41.1445856106882,57.8823581229924,43.9683099903331,35.4276907697175,73.9466022269937,20.2725215290164,27.4238255630089,37.9368803095161,48.1581811345525,59.4057250795982,73.439419656701,67.3464243916072,93.1920333021403,85.0467962269798,85.2989526257671,91.707865776107,92.7482153412776,101.33227419142,39.677817132662,20.644693663788,15.5204971934393,20.9855770455098,37.6719708362771,30.4045610230915,41.0259638358674,35.5851509271249,30.0943262421218,35.0146142422581,44.6515479411962,30.9363577257274,43.6507083152966,50.6961064630275,58.1653300990069,43.8764625150674,42.7805143063009,54.3770890781045,41.4208249401456,16.9173376562208,27.9317411380722,30.9027826414983,32.3331933700831,20.7517031001702,14.5236371675511,27.7808409752019,30.6992235285952,35.6220322646915,30.0709681998919,30.4175159868288,30.7460936459304,30.7144144501214,31.9485510500298,33.0253946494776,30.4827962421167,31.4046523310558,27.5860185263098,24.7251540481984,29.8813807872827,25.0294554241353,33.3654515579554,28.6123427936785,28.6332440765687,29.0797985483372,27.9228206042532,28.5367637681525,30.5160865267898,31.3707502983941,32.5462517561488,26.0997039873183,32.0139567720581,24.9630936333511,26.9590103663581,30.4792445350203,27.2293529952361,29.9432458810123,38.891660782742,35.5796297648049,29.7798415811346,28.2878759456914 | |phase1_expression=27.0651551607102,25.4752047576734,28.2099528421512,19.3577095236371,28.5510566069418,23.5030980676646,15.1848216387092,59.9132220768914,113.757287498547,125.224521582267,40.4074405012192,39.5669908616869,85.4291642356717,93.1027285762322,35.6427445142759,48.3915889061684,48.9693314689703,66.7202479732673,63.7582116266685,50.9267582157636,38.1844372778303,23.4326644834089,22.9855814442263,19.5190755807956,14.9116032693661,17.2269589234506,9.47676391549965,18.3150547783006,22.2327400763957,17.8941392129551,19.0688239163562,18.4158895303293,27.6779154413057,31.6963362030877,23.108129580102,15.2935873729813,21.4377824075488,58.1758966724302,38.2854318816662,64.3934205087772,41.764435650202,45.7640474922159,56.3192009516138,41.0423626600382,45.315488255123,39.6460984669232,12.5182615095686,6.1047043786525,4.83309602015838,10.304784650937,11.3389001516544,5.75010257459886,58.55612951415,83.4166463313046,101.164233541882,19.551717138732,25.2149427146106,21.1425557833751,27.1104057551861,21.6886301501533,17.1134478946668,19.9918273920788,16.0073063300005,4.04954872776629,3.9554654502679,7.8152812644071,6.2916023208865,7.68436610643109,27.6851264863635,14.850653216486,21.8737959805437,12.5686433137674,13.0312439161452,25.2331046382805,17.7314121383737,16.5459381589804,33.0347642998166,33.4540825783192,36.5583549149859,21.101806036831,16.5592634920361,30.2129754922921,19.5428099300967,31.5147061617741,31.6292372897997,27.9897156199984,31.3217697758026,31.1287074528252,23.9294770932862,28.188191919831,48.6972341018819,18.9293252935905,19.7191686775248,13.4925797909454,32.4888208723835,38.0822854032735,22.7519960613438,19.5994870964766,20.2633083590238,12.3668851078619,25.9151892389092,33.3648841277226,17.8363667794652,0,17.3192832808971,20.2687892380079,16.6823066854878,25.8055568165076,104.35196710981,34.735460541169,17.1750473498474,17.354532263792,16.6043158024362,20.1968338340514,37.5107975762898,16.3366568728578,81.5743393523434,37.3066340853372,33.6152009740952,23.1326595424795,29.8136049921531,38.3051449976825,14.9113408974498,83.4425271482909,76.866941400538,24.7793343552334,54.6356967746996,25.7958174327165,46.6347733358147,52.5765144310928,41.632554856495,34.5549468310377,53.3640662990289,48.5859368927628,33.8694512632083,46.2387599743109,35.0327411645088,39.8102305952298,29.3158399783063,49.6642779892079,26.9349316932797,25.749035696549,30.0703756774933,37.525499641093,50.9593378643446,49.451896029952,45.3516346869088,52.2580808892812,28.8861110530009,41.6033376369202,39.7649540610524,20.604398848192,38.6485676423581,34.8252166522167,34.5713989165345,28.262865888226,23.87524836865,28.3082697826187,21.0280989552739,26.3049731120087,26.9704968978261,29.8903022025285,30.5400708904921,25.3825858954151,32.7046279321242,26.0438018120457,24.9494263301646,35.7301947643539,26.8232555358973,33.6543301362145,30.0765283415125,25.8773977742838,32.2738669477844,26.3044580770329,53.2033569867242,38.3834204174731,29.407271685558,20.6271441997565,32.2065258308203,31.8164240448801,34.536479634321,31.6643133658648,29.7986578752126,24.5391057685201,21.353807769503,23.5519505255336,30.1602250560323,29.8434708061726,28.0748285451533,24.268124033664,28.3140845335849,31.8626037206988,11.7594098590911,29.933110303749,29.3040112750009,30.9550018324878,26.3775382547971,36.4706263429657,33.7050742872291,31.8837919635941,31.5567442961163,28.8749363577013,27.2736416920177,29.6984288174647,33.8081471594709,34.8536274196523,33.471920029103,40.0354085189012,32.0828573244589,30.2080944323351,55.125977103512,32.9473695825698,34.5043695665651,41.3076451912039,27.4593152340813,29.5517287198121,34.4443033962071,31.3588288886189,59.1210208533135,20.4650724712124,33.2448551941733,26.9894686382549,36.6116787330063,53.9370148962647,48.0848154589748,48.7834119644497,52.807773275574,55.8091017914913,50.2282521271084,44.2430949732493,49.3879048136461,50.6271705035291,21.1107797514981,15.2293591469239,18.1952781017043,29.8011686009111,46.8807722764353,48.7600616223565,15.4098848654075,26.2569764292548,23.0321000173867,23.4263246577983,28.2204651029967,25.091723785018,30.9690156974528,39.6307143104365,24.6934528021686,25.7185154961954,32.0183100136684,48.8408400961147,37.8980027506077,20.8336756290689,46.097009497062,45.2018136944747,35.84118735179,22.5785991624133,21.1626489875326,23.0098197302196,18.6040192514887,21.5204603560749,24.8091161441492,29.0826983582004,28.5197902707777,28.7593449721593,22.1379078007497,20.6271086496374,44.2571487479924,25.568675352446,11.5129228566652,23.7914108885067,32.8079432238206,28.0039043635251,33.5680002028327,17.0500371504176,33.3233825450469,36.4351161885771,27.1249929607603,39.5727007059552,50.8612944092102,39.5652787528702,33.3048839768751,39.5579568385598,29.4395644996149,45.9854748986064,36.3954976099426,26.8302928352189,36.6685164192029,45.2084296811258,50.0300873458952,49.1873072394024,69.5211778674868,68.1563572816214,64.6775877404703,11.4560474161814,28.6284074190927,34.7676288786911,32.617612928184,31.1541561061558,27.9504081595107,31.0187996685088,34.7144514046411,21.9874991266585,29.1633689906534,41.629733976824,19.1655599152625,36.3325206886868,28.4588603586208,31.5010925117357,28.5443209885786,35.818698604045,51.2851132881945,41.1445856106882,57.8823581229924,43.9683099903331,35.4276907697175,73.9466022269937,20.2725215290164,27.4238255630089,37.9368803095161,48.1581811345525,59.4057250795982,73.439419656701,67.3464243916072,93.1920333021403,85.0467962269798,85.2989526257671,91.707865776107,92.7482153412776,101.33227419142,39.677817132662,20.644693663788,15.5204971934393,20.9855770455098,37.6719708362771,30.4045610230915,41.0259638358674,35.5851509271249,30.0943262421218,35.0146142422581,44.6515479411962,30.9363577257274,43.6507083152966,50.6961064630275,58.1653300990069,43.8764625150674,42.7805143063009,54.3770890781045,41.4208249401456,16.9173376562208,27.9317411380722,30.9027826414983,32.3331933700831,20.7517031001702,14.5236371675511,27.7808409752019,30.6992235285952,35.6220322646915,30.0709681998919,30.4175159868288,30.7460936459304,30.7144144501214,31.9485510500298,33.0253946494776,30.4827962421167,31.4046523310558,27.5860185263098,24.7251540481984,29.8813807872827,25.0294554241353,33.3654515579554,28.6123427936785,28.6332440765687,29.0797985483372,27.9228206042532,28.5367637681525,30.5160865267898,31.3707502983941,32.5462517561488,26.0997039873183,32.0139567720581,24.9630936333511,26.9590103663581,30.4792445350203,27.2293529952361,29.9432458810123,38.891660782742,35.5796297648049,29.7798415811346,28.2878759456914 | ||
|short_description=p1@Rictor | |short_description=p1@Rictor | ||
}} | }} |
Latest revision as of 22:04, 26 September 2015
Short description: | p1@Rictor |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rictor_5end |
Coexpression cluster: | MCL_coexpression_mm9:614 |
Association with transcript: | 0bp_to_ENSMUST00000061656, ENSMUST00000168540, NM_030168, uc007vdn.2, uc007vdo.2, uc007vdp.2, uc007vdq.2, uc007vdr.2, uc011zrb.1_5end |
EntrezGene: | Rictor |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.70e-08 | 42 |
mixed endoderm/mesoderm-derived structure | 6.98e-08 | 35 |
respiratory tract | 1.02e-07 | 41 |
hemopoietic organ | 1.34e-07 | 29 |
immune organ | 1.34e-07 | 29 |
anterior region of body | 2.87e-07 | 43 |
craniocervical region | 2.88e-07 | 36 |
gland of gut | 4.79e-07 | 24 |
pharynx | 5.32e-07 | 24 |
upper respiratory tract | 5.32e-07 | 24 |
chordate pharynx | 5.32e-07 | 24 |
pharyngeal arch system | 5.32e-07 | 24 |
pharyngeal region of foregut | 5.32e-07 | 24 |
thymus | 8.49e-07 | 23 |
neck | 8.49e-07 | 23 |
respiratory system epithelium | 8.49e-07 | 23 |
hemolymphoid system gland | 8.49e-07 | 23 |
pharyngeal epithelium | 8.49e-07 | 23 |
thymic region | 8.49e-07 | 23 |
pharyngeal gland | 8.49e-07 | 23 |
entire pharyngeal arch endoderm | 8.49e-07 | 23 |
thymus primordium | 8.49e-07 | 23 |
early pharyngeal endoderm | 8.49e-07 | 23 |
foregut | 9.26e-07 | 80 |