FFCP PHASE1:Mm9::chr9:58097509..58097598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18854 | |EntrezGene=18854 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3714 | |||
|TSSclassifier=NA | |||
|UniProt=Q60953,D3Z2V0,D3Z3A6,D6RII9,D3YXR5,Q8BSJ6 | |UniProt=Q60953,D3Z2V0,D3Z3A6,D6RII9,D3YXR5,Q8BSJ6 | ||
|association_with_transcript=0bp_to_ENSMUST00000041209,ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000124982,ENSMUST00000135310,ENSMUST00000148301,ENSMUST00000153820,NM_008884,NM_178087,uc009pwn.1,uc009pwo.1,uc009pwp.2,uc009pwq.2,uc009pwr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000041209,ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000124982,ENSMUST00000135310,ENSMUST00000148301,ENSMUST00000153820,NM_008884,NM_178087,uc009pwn.1,uc009pwo.1,uc009pwp.2,uc009pwq.2,uc009pwr.1_5end | ||
|cluster_id=chr9:58097509..58097598,- | |||
|description=CAGE_peak_1_at_Pml_5end | |description=CAGE_peak_1_at_Pml_5end | ||
|id=chr9:58097509..58097598,- | |id=chr9:58097509..58097598,- | ||
|ontology_enrichment_celltype=CL:0000839!8.00e-07!13 | |ontology_enrichment_celltype=CL:0000839!8.00e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,8.00e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.42e-15!193;UBERON:0004120!3.42e-15!193;UBERON:0006603!3.42e-15!193;UBERON:0003104!3.91e-13!131;UBERON:0009142!3.91e-13!131;UBERON:0001007!4.67e-12!128;UBERON:0001555!4.67e-12!128;UBERON:0007026!4.67e-12!128;UBERON:0004921!8.36e-12!126;UBERON:0004185!8.36e-12!126;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0002405!1.04e-10!70;UBERON:0001041!1.84e-10!92;UBERON:0000077!6.29e-10!97;UBERON:0000466!7.98e-09!79;UBERON:0005172!4.21e-08!49;UBERON:0005173!4.21e-08!49;UBERON:0002417!4.21e-08!49;UBERON:0000916!4.21e-08!49;UBERON:0009569!1.10e-07!66;UBERON:0005057!1.85e-07!51;UBERON:0005177!2.55e-07!85;UBERON:0002193!2.66e-07!48;UBERON:0002075!5.04e-07!19 | |ontology_enrichment_uberon=UBERON:0000926!3.42e-15!193;UBERON:0004120!3.42e-15!193;UBERON:0006603!3.42e-15!193;UBERON:0003104!3.91e-13!131;UBERON:0009142!3.91e-13!131;UBERON:0001007!4.67e-12!128;UBERON:0001555!4.67e-12!128;UBERON:0007026!4.67e-12!128;UBERON:0004921!8.36e-12!126;UBERON:0004185!8.36e-12!126;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0002405!1.04e-10!70;UBERON:0001041!1.84e-10!92;UBERON:0000077!6.29e-10!97;UBERON:0000466!7.98e-09!79;UBERON:0005172!4.21e-08!49;UBERON:0005173!4.21e-08!49;UBERON:0002417!4.21e-08!49;UBERON:0000916!4.21e-08!49;UBERON:0009569!1.10e-07!66;UBERON:0005057!1.85e-07!51;UBERON:0005177!2.55e-07!85;UBERON:0002193!2.66e-07!48;UBERON:0002075!5.04e-07!19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.34e-10,79;UBERON:0002100,5.99e-10,90;UBERON:0001007,2.84e-09,116;UBERON:0001555,2.84e-09,116;UBERON:0007026,2.84e-09,116;UBERON:0004921,4.72e-09,114;UBERON:0004119,7.90e-09,118;UBERON:0000925,7.90e-09,118;UBERON:0006595,7.90e-09,118;UBERON:0005172,4.21e-08,49;UBERON:0005173,4.21e-08,49;UBERON:0002417,4.21e-08,49;UBERON:0000916,4.21e-08,49;UBERON:0001041,7.25e-08,80;UBERON:0009569,1.10e-07,66;UBERON:0002193,2.66e-07,48;UBERON:0002405,2.66e-07,48;UBERON:0002075,5.04e-07,19 | |||
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|phase1_expression=11.2104192973356,36.2934423944936,32.3049459966571,19.0552453123303,24.0429950374247,17.1236857350128,19.8570744506197,27.3741445696142,6.47628121897667,5.61754863172784,5.99262888789267,8.13676021752431,30.9873321175482,30.3348796393921,67.9543914103952,76.1307005385746,67.1579403003021,127.288983722049,124.362791280405,84.877930359606,18.9646537036886,22.1418821177974,16.194386926614,30.0785754851605,23.6291559499185,19.5238867799107,18.0920038386811,28.8731451799091,20.5225293012884,27.2192540140725,14.4124831925948,68.5833127336402,76.2680336604867,31.6963362030877,18.1976520443303,12.8000676926039,13.4751775133164,15.0671387065287,8.5946887897618,9.94695113550217,11.7646297606203,19.1252735788365,16.5073520030592,53.6320444575959,49.4719424351231,44.2347672709652,53.9850027600147,22.0205407944251,19.552070263368,17.1098311185369,38.6362523686001,24.4379359420452,68.2875206654987,20.3101399763176,33.2732861151039,20.3234954468398,23.2092086350393,25.7836046138721,3.03474691289397,1.05798195854407,3.80298842103708,58.6201040479598,64.9185201161132,26.0970918011606,43.5101199529469,30.5506449426823,29.0612107202853,22.2846617086502,7.46565208621039,7.42532660824299,6.52007380189284,5.42736870367227,6.40518768759679,8.81933754347669,8.81778333367775,11.0306254393203,2.20231761998777,6.76742891851495,5.83704826373725,3.03338461779446,5.48925861614458,3.64639359389732,4.4669279840221,3.37657566019008,7.18151764551008,7.95497180778903,5.97961059356232,4.47358669980721,9.76867893998074,26.072188236841,54.4945238759154,19.7897491705719,1.3599426674155,15.1116893658589,23.3919510281161,22.8493712419641,22.3306628009485,19.0881961287425,14.2882302531578,16.2536204274756,10.4224130634744,17.9657068380045,17.8363667794652,7.11066703153331,10.1750789275271,13.1747130047051,10.1104889002957,21.3523855074642,131.281507009116,32.0635020380021,21.3386951922347,24.6617037432834,26.0595511899346,24.8692356911827,22.694620477191,28.4006496405067,15.8204779349999,28.7752720270624,63.6919597403909,24.7503280419536,45.4933528028411,49.4572758197927,37.2783522436244,16.3957246326466,11.1006754611131,40.617671778166,14.7372603142282,12.5979573508616,14.6130761134024,9.58660092190865,12.8100168789215,5.90575454930463,13.0368240144207,12.5300574091862,8.72709787150152,9.5722345209977,24.0340898686746,39.1881957421793,16.1742565397552,36.40644106836,21.3397526458834,10.8053989083732,17.2859644613135,14.4676625122286,13.6072998302656,12.811372028485,13.2119431629218,18.1092359517311,26.0837271448739,26.8530633838303,26.3926686245923,18.1932457914887,21.9657326888222,22.984642990463,25.1054206417691,27.6657630877706,11.2354109970118,11.5806558201622,7.95657798307659,24.8550927042602,22.045449638223,14.7650890398032,22.7274946161802,21.447301260467,17.2779166433864,17.672579801031,20.1205051049714,13.077718345123,19.0889425899637,18.7150909050169,15.4841426232584,14.9123987173839,23.2723122208514,15.7021509949635,11.565947171027,5.76265829323993,51.5453301454725,35.1719253662514,24.1015723104814,26.47498059209,24.6136851125198,25.2104405779178,20.6811580775729,21.4954957507192,28.4717436926707,19.2697777027093,27.6468729680296,26.8591237255554,22.8107981929371,38.6492345721315,25.9365659849633,29.4729084416463,26.3638382324784,25.0204242615306,43.9560169125014,27.6965805869627,24.8259183574561,20.479659407973,29.2152801514069,37.6405877347986,33.2837303023715,22.0880923420023,22.2339470315362,46.8834747062224,48.9431897831875,56.4403902085983,62.8866376304359,54.7472152637986,38.193877767213,53.5114815658508,21.5639851610797,29.1035097979366,201.275489138296,36.8419538191818,32.1398803307997,34.3507274008072,32.8297266745099,19.2977408545347,37.1353912234875,14.0223644710159,27.8670109715864,26.8197235524797,30.2750420292168,22.2783322397615,38.5630698235342,19.7084984336377,27.5861502185834,25.4684393096091,30.6153155822375,29.4953966488328,33.5008864819837,23.4331474902049,33.1740824666399,33.1782467129413,31.4729134732183,19.0396354950265,10.5963389391943,7.2671245687166,19.6721934452011,14.1383719234449,17.6684602873104,21.0836921920185,21.5423397732799,32.2607877235945,23.3938607786514,18.9661275628518,40.8858808691643,30.6868650806877,32.4135977916149,15.1021018718249,36.9044221541498,27.6001685684246,21.3381916753185,34.9736660701775,39.8235415019888,37.8737792401771,31.7439734812989,37.5324108714237,38.6845479673812,48.5747533751405,26.3596859031586,30.900367005588,31.3717692978555,24.6508671189936,18.9753495434998,33.0033738394198,26.8947288545492,18.006109403131,16.0404767890616,16.9326257674958,22.1675292052842,19.0854634834215,22.0495687606842,17.3545020995322,18.0697215209057,17.7938939525609,18.7449138346718,20.281009111802,17.5996225098537,19.0588842772972,16.9508728484454,15.5933854757808,34.6862195589522,10.3838169125885,95.8585641275954,28.8941615148511,61.2993885593746,93.4307546743267,158.291915700947,97.6882799591852,27.026570369023,35.2677659855618,27.3635948132759,38.1868247206045,24.3578715057474,30.904559003281,21.3850574827167,20.6997413054324,24.8933322670642,21.848024114341,24.7960367176008,20.9404753587224,28.6449090974862,47.2217877946063,2.25477175473676,42.9112487146219,29.2861528109063,26.0564592381024,27.381882577279,27.8777607059784,31.9211689116451,23.8274024264429,16.7774951081137,7.9722759872582,8.06484017522023,44.8735791292013,28.7869805712033,30.7105761922833,34.2990972661379,45.6518073952078,42.1204472136282,35.3374621588708,32.7870750327561,40.0836806294146,38.1796101341549,34.5833815019363,44.5382514980669,34.155203782317,38.3356239155546,21.0859256762147,15.0950448294364,12.4702260687171,10.9125000636651,35.9332644899874,30.7799259739938,32.9672923681077,21.6512062869857,30.0943262421218,16.3778034358949,9.66682996665071,17.7597609166213,14.2638141345261,17.1270629942661,18.8848474347425,6.75022500231806,18.0128481289688,15.406841905463,17.0860902878101,18.9930846079043,20.7492934168536,17.2440941811676,28.4434858969904,19.9132504496583,13.604419625301,20.224452229947,21.427645952845,23.7480215097943,16.172621552883,19.7713853914387,19.9943921869241,22.8485278226513,21.4484260556312,20.044978665509,23.3383908728706,19.0050294549563,18.5192851645157,22.2526386433786,18.2526660966653,17.8292011240416,20.5871935144832,19.7902037656276,22.0926553281139,20.6099543109574,20.7305789334607,17.9269413415317,18.6779495120868,17.654534799962,12.3451299764702,19.2188729361162,17.829311309977,26.6000178060298,18.9022946246879,20.6410073749821,18.7357933453459,20.1181183263051,21.4871054048298,13.9640482410256,24.9268303605053,16.4626163290499 | ||
|short_description=p1@Pml | |short_description=p1@Pml | ||
}} | }} |
Latest revision as of 22:11, 26 September 2015
Short description: | p1@Pml |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pml_5end |
Coexpression cluster: | MCL_coexpression_mm9:3714 |
Association with transcript: | 0bp_to_ENSMUST00000041209, ENSMUST00000085673, ENSMUST00000114136, ENSMUST00000124982, ENSMUST00000135310, ENSMUST00000148301, ENSMUST00000153820, NM_008884, NM_178087, uc009pwn.1, uc009pwo.1, uc009pwp.2, uc009pwq.2, uc009pwr.1_5end |
EntrezGene: | Pml |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 8.00e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.34e-10 | 79 |
trunk | 5.99e-10 | 90 |
digestive system | 2.84e-09 | 116 |
digestive tract | 2.84e-09 | 116 |
primitive gut | 2.84e-09 | 116 |
subdivision of digestive tract | 4.72e-09 | 114 |
endoderm-derived structure | 7.90e-09 | 118 |
endoderm | 7.90e-09 | 118 |
presumptive endoderm | 7.90e-09 | 118 |
abdomen element | 4.21e-08 | 49 |
abdominal segment element | 4.21e-08 | 49 |
abdominal segment of trunk | 4.21e-08 | 49 |
abdomen | 4.21e-08 | 49 |
foregut | 7.25e-08 | 80 |
subdivision of trunk | 1.10e-07 | 66 |
hemolymphoid system | 2.66e-07 | 48 |
immune system | 2.66e-07 | 48 |
viscus | 5.04e-07 | 19 |