FFCP PHASE1:Mm9::chr1:182781262..182781303,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:182781262..182781303,+ to FFCP PHASE1:Mm9::chr1:182781262..182781303,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=208768 | |EntrezGene=208768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=318 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1J5 | |UniProt=Q8K1J5 | ||
|association_with_transcript=0bp_to_ENSMUST00000038091,NM_145943,uc007dwt.1_5end | |||
|cluster_id=chr1:182781262..182781303,+ | |||
|description=CAGE_peak_1_at_BC031781_5end | |||
|id=chr1:182781262..182781303,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.43e-12!32;CL:0002032!7.43e-12!32;CL:0000037!7.43e-12!32;CL:0000566!7.43e-12!32;CL:0000837!7.43e-12!32;CL:0000144!5.60e-09!121;CL:0000012!5.60e-09!121;CL:0000034!1.32e-08!97;CL:0002031!1.62e-08!25;CL:0000838!4.09e-08!12;CL:0000063!4.75e-08!66;CL:0000542!6.37e-08!13;CL:0000051!6.37e-08!13;CL:0002371!1.06e-07!118;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.43e-12,32;CL:0002032,7.43e-12,32;CL:0000037,7.43e-12,32;CL:0000837,7.43e-12,32;CL:0000034,1.32e-08,97;CL:0002031,1.62e-08,25;CL:0000838,4.09e-08,12;CL:0000542,6.37e-08,13;CL:0000051,6.37e-08,13;CL:0000084,1.89e-07,11;CL:0000827,1.89e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.41e-09!29;UBERON:0002390!5.60e-08!45;UBERON:0003061!5.60e-08!45;UBERON:0002193!9.20e-08!48;UBERON:0002370!3.32e-07!23;UBERON:0000974!3.32e-07!23;UBERON:0004807!3.32e-07!23;UBERON:0005058!3.32e-07!23;UBERON:0003351!3.32e-07!23;UBERON:0009113!3.32e-07!23;UBERON:0003295!3.32e-07!23;UBERON:0009722!3.32e-07!23;UBERON:0005562!3.32e-07!23;UBERON:0007690!3.32e-07!23;UBERON:0006562!3.49e-07!24;UBERON:0001557!3.49e-07!24;UBERON:0001042!3.49e-07!24;UBERON:0008814!3.49e-07!24;UBERON:0009145!3.49e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.41e-09,29;UBERON:0005057,4.41e-09,29;UBERON:0000077,5.34e-08,35;UBERON:0002390,5.60e-08,45;UBERON:0003061,5.60e-08,45;UBERON:0002193,9.20e-08,48;UBERON:0002405,9.20e-08,48;UBERON:0002370,3.32e-07,23;UBERON:0000974,3.32e-07,23;UBERON:0004807,3.32e-07,23;UBERON:0005058,3.32e-07,23;UBERON:0003351,3.32e-07,23;UBERON:0009113,3.32e-07,23;UBERON:0003295,3.32e-07,23;UBERON:0009722,3.32e-07,23;UBERON:0005562,3.32e-07,23;UBERON:0007690,3.32e-07,23;UBERON:0006562,3.49e-07,24;UBERON:0001557,3.49e-07,24;UBERON:0001042,3.49e-07,24;UBERON:0008814,3.49e-07,24;UBERON:0009145,3.49e-07,24 | |||
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|phase1_expression=34.7522998217403,33.1526637257393,37.309937629942,23.8946726932396,24.543890767371,28.875234768845,21.9595882159794,35.7671605933166,101.508668671352,93.6258105287974,62.8369943387603,51.1339539160106,46.0529963514943,47.8189601231916,27.3150004688843,37.6603997345076,38.4759032970481,36.9090733469138,36.4724393391265,28.00971701867,21.2608225377674,30.7801948722744,36.0455709011731,22.7189240366637,17.4351053611049,20.0981187440257,25.4149577733854,23.9173068281337,17.29213117053,17.8941392129551,19.9557459589774,48.8973618563916,47.3599886440119,31.6963362030877,22.8192779603507,20.613096024453,24.2961533952219,72.405972117485,46.0987853269042,48.6877081895632,121.175686534389,83.3315491649304,68.4569597773927,30.5929267680653,29.5006869848787,21.1078764985934,14.8654355426127,8.50298109883741,12.5221124158649,19.6374198065026,15.5384928004152,12.9377307928474,93.9582593923324,65.282592781021,75.6211048070544,25.2114247315228,25.7880095944881,29.9089813520917,24.4802917640113,15.340738398889,27.2547503507657,13.5537812827653,14.2287167377782,7.64914759689189,8.89979726310277,7.8152812644071,6.5912024314049,7.68436610643109,23.9523004432583,21.8709620097339,23.135745748652,10.5690864229407,13.9147180799517,26.70299422886,25.7824317039056,20.2228133054205,18.7196997698961,20.42997409363,18.5863905240055,19.6510568717989,22.5974479697952,29.1711487511786,12.5632349550621,21.3849791812038,18.3357897332172,18.8562294703147,23.0642122894547,24.9775257405903,31.8050011999373,31.2866258842092,83.1911082573815,18.0689014166091,33.9985666853875,20.5087212822371,12.9955283489534,14.3368603871147,14.1848864333069,19.9403477416328,22.0818103912438,24.3804306412135,26.901093177346,48.7640614174408,71.3454671178608,71.1066703153331,24.8964697162896,20.7755089689581,14.1546844604139,19.2970756725211,30.0367945030719,19.445920217492,23.9409750937267,20.7036525252256,24.2146272118861,20.1968338340514,23.1649753057338,21.2376539347152,29.4162011603905,14.749134405831,31.8459798701955,20.544389943321,21.2007857721978,18.4252596191384,14.9113408974498,21.0802173848314,23.458031163107,13.5392239260553,79.5572426719311,73.1881331811957,63.9163242177515,14.0803201040533,17.3850229071078,24.12563560567,19.1206752211504,22.2472447877388,19.5320761885986,17.3598151482501,22.4046600470696,21.8956268273764,16.4269792981889,16.8353484709179,20.0385482162564,19.0818746679783,19.8068342785884,21.8521985861787,21.9757892258789,22.4199010498487,20.9891863013793,19.4027528054262,23.9280472155455,20.8016688184601,24.105304010461,19.7276159184817,23.6340161841758,24.7259038230738,22.4302528684658,26.0734889532226,53.3682022358058,55.072452122549,48.3077948972507,15.7415587126981,19.9347150983932,21.2473232523998,19.8865577891577,24.3987647366781,20.3632589011339,18.6027155800326,20.3887785063711,21.368057653192,21.3927804887525,16.2525789438304,17.429794052359,17.8363984658905,16.4662586468288,16.7758023450465,14.5100064509248,22.1244916615462,12.5559137533843,13.4869788998408,23.8882840599462,24.1526138734856,20.2321914275687,20.1683524623343,20.9035361214178,16.5496294717926,17.0830462156024,18.4462829290892,18.5988054512199,17.110256595539,17.5467678407208,17.0775687644302,18.5878722892237,15.3338780405863,25.2258308267599,25.3631697993598,21.4144697778853,21.9943434072939,19.3952487167626,25.108623520734,18.7812515259044,15.3514553898786,13.3448918665169,13.8204823592417,12.7474629647474,34.2032466717993,29.4838492669804,29.232074610031,32.4576194221605,26.7706647325183,25.2079593263606,22.727994858614,15.5649817704034,18.9447375099776,18.6898668485561,15.6299198020771,19.9704110793319,13.3866805311969,15.6075749764064,16.8855232477179,18.8448253969937,21.6020209418353,22.4891667489996,22.4063513223248,24.1730955737157,20.2682571504597,24.7565386521454,26.9284434043762,21.1231093102296,16.8313164133069,24.556034373253,27.529036872244,24.1758974612254,21.1187625529007,25.6345182696763,17.9488875660174,18.6870423747234,21.5230662117691,11.559642479121,14.0654023910644,31.311574566945,14.1383719234449,25.5561657727168,17.1793047490521,20.8960695800815,21.7461606136822,23.6166594527338,27.4584234865167,26.3126956088681,29.2255857911312,27.6701444562566,18.6366363524648,16.890870139784,23.3265940804104,21.3381916753185,19.4664745107592,21.2392221343941,17.2374251670037,21.7672961014621,22.255399411196,15.3556984298002,21.8278955040189,27.6518273689997,22.1755574981278,23.1723295950069,20.8584260237639,20.0295356292498,19.5957532171555,24.1712120085189,25.2085531643834,24.1900738673751,24.0057479235383,25.0049729435606,22.652839835463,20.404078554663,21.312546438022,21.1204537257339,24.3606881493393,14.1138174755176,31.8230468177056,23.896735150994,24.4870475208313,22.8001177045991,24.2928531622691,15.1570035047522,15.0194494628513,26.3141156428693,26.8302928352189,27.593984578087,32.5877430618115,29.2525647322994,31.8001660757066,97.7375972464668,111.541307501955,97.1545815845099,15.2747298882418,19.4546636052398,23.9916971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|short_description=p1@BC031781 | |||
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Latest revision as of 22:21, 26 September 2015
Short description: | p1@BC031781 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC031781_5end |
Coexpression cluster: | MCL_coexpression_mm9:318 |
Association with transcript: | 0bp_to_ENSMUST00000038091, NM_145943, uc007dwt.1_5end |
EntrezGene: | BC031781 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.43e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.43e-12 | 32 |
hematopoietic stem cell | 7.43e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.43e-12 | 32 |
stem cell | 1.32e-08 | 97 |
hematopoietic lineage restricted progenitor cell | 1.62e-08 | 25 |
lymphoid lineage restricted progenitor cell | 4.09e-08 | 12 |
lymphocyte | 6.37e-08 | 13 |
common lymphoid progenitor | 6.37e-08 | 13 |
T cell | 1.89e-07 | 11 |
pro-T cell | 1.89e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.41e-09 | 29 |
immune organ | 4.41e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.34e-08 | 35 |
hematopoietic system | 5.60e-08 | 45 |
blood island | 5.60e-08 | 45 |
hemolymphoid system | 9.20e-08 | 48 |
immune system | 9.20e-08 | 48 |
thymus | 3.32e-07 | 23 |
neck | 3.32e-07 | 23 |
respiratory system epithelium | 3.32e-07 | 23 |
hemolymphoid system gland | 3.32e-07 | 23 |
pharyngeal epithelium | 3.32e-07 | 23 |
thymic region | 3.32e-07 | 23 |
pharyngeal gland | 3.32e-07 | 23 |
entire pharyngeal arch endoderm | 3.32e-07 | 23 |
thymus primordium | 3.32e-07 | 23 |
early pharyngeal endoderm | 3.32e-07 | 23 |
pharynx | 3.49e-07 | 24 |
upper respiratory tract | 3.49e-07 | 24 |
chordate pharynx | 3.49e-07 | 24 |
pharyngeal arch system | 3.49e-07 | 24 |
pharyngeal region of foregut | 3.49e-07 | 24 |