FFCP PHASE1:Mm9::chr9:59797503..59797513,-: Difference between revisions
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{{FFCP|EntrezGene=23958|HGNC=|MCL_coexpression_id=1277|UniProt=|association_with_transcript=-302bp_to_ENSMUST00000147892_5end|description=CAGE_peak_3_at_Nr2e3_5end|id=chr9:59797503..59797513,-|ontology_enrichment_celltype=CL:0002563!4.75e-08!9;CL:0002251!4.75e-08!9|ontology_enrichment_celltype_v019_2=CL:0002250,1.72e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.22e-17!43;UBERON:0005409!1.26e-16!59;UBERON:0000344!5.77e-09!15;UBERON:0003350!4.75e-08!9;UBERON:0004808!4.75e-08!9;UBERON:0001277!4.75e-08!9;UBERON:0001242!8.84e-07!13;UBERON:0000060!8.84e-07!13;UBERON:0001262!8.84e-07!13;UBERON:0004786!8.84e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.09e-32,31;UBERON:0005409,9.60e-27,47;UBERON:0001007,1.10e-10,116;UBERON:0001555,1.10e-10,116;UBERON:0007026,1.10e-10,116;UBERON:0004119,1.86e-10,118;UBERON:0000925,1.86e-10,118;UBERON:0006595,1.86e-10,118;UBERON:0004921,1.50e-09,114|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.45881856213434,0,0,0,0.950117097281869,0,0,0,0,0,8.08784535303569,9.14290549471708,10.6168065256432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.77320476793256,2.01683524623343,4.66993892074228,8.17970192284004,4.2707615539006,3.62337700392824,8.54539709920916,12.5342577385925,14.2323783596958,1.79763881730844,2.80979464837102,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,1.09181281873089,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.953744759789284,0.290692833264657,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p3@Nr2e3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23958 | |||
|HGNC= | |||
|MCL_coexpression_id=1277 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-302bp_to_ENSMUST00000147892_5end | |||
|cluster_id=chr9:59797503..59797513,- | |||
|description=CAGE_peak_3_at_Nr2e3_5end | |||
|id=chr9:59797503..59797513,- | |||
|ontology_enrichment_celltype=CL:0002563!4.75e-08!9;CL:0002251!4.75e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.72e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.22e-17!43;UBERON:0005409!1.26e-16!59;UBERON:0000344!5.77e-09!15;UBERON:0003350!4.75e-08!9;UBERON:0004808!4.75e-08!9;UBERON:0001277!4.75e-08!9;UBERON:0001242!8.84e-07!13;UBERON:0000060!8.84e-07!13;UBERON:0001262!8.84e-07!13;UBERON:0004786!8.84e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.09e-32,31;UBERON:0005409,9.60e-27,47;UBERON:0001007,1.10e-10,116;UBERON:0001555,1.10e-10,116;UBERON:0007026,1.10e-10,116;UBERON:0004119,1.86e-10,118;UBERON:0000925,1.86e-10,118;UBERON:0006595,1.86e-10,118;UBERON:0004921,1.50e-09,114 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.45881856213434,0,0,0,0.950117097281869,0,0,0,0,0,8.08784535303569,9.14290549471708,10.6168065256432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.77320476793256,2.01683524623343,4.66993892074228,8.17970192284004,4.2707615539006,3.62337700392824,8.54539709920916,12.5342577385925,14.2323783596958,1.79763881730844,2.80979464837102,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,1.09181281873089,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.953744759789284,0.290692833264657,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p3@Nr2e3 | |||
}} |
Latest revision as of 22:48, 26 September 2015
Short description: | p3@Nr2e3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nr2e3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1277 |
Association with transcript: | -302bp_to_ENSMUST00000147892_5end |
EntrezGene: | Nr2e3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.72e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.09e-32 | 31 |
gastrointestinal system | 9.60e-27 | 47 |
digestive system | 1.10e-10 | 116 |
digestive tract | 1.10e-10 | 116 |
primitive gut | 1.10e-10 | 116 |
endoderm-derived structure | 1.86e-10 | 118 |
endoderm | 1.86e-10 | 118 |
presumptive endoderm | 1.86e-10 | 118 |
subdivision of digestive tract | 1.50e-09 | 114 |