FFCP PHASE1:Mm9::chr17:8428972..8428983,+: Difference between revisions
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|id=chr17:8428972..8428983,+
|short_description=p5@Ccr6
|description=CAGE_peak_5_at_Ccr6_5end
|association_with_transcript=64bp_to_NM_001190333,uc008ajd.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12458 | |EntrezGene=12458 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=O54689,Q542B6 | |UniProt=O54689,Q542B6 | ||
|association_with_transcript=64bp_to_NM_001190333,uc008ajd.2_5end | |||
|cluster_id=chr17:8428972..8428983,+ | |||
|description=CAGE_peak_5_at_Ccr6_5end | |||
|id=chr17:8428972..8428983,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.80e-14,25;CL:0000838,3.11e-13,12;CL:0000542,3.01e-12,13;CL:0000051,3.01e-12,13;CL:0000815,2.31e-11,1;CL:0000792,2.31e-11,1;CL:0000988,6.59e-11,32;CL:0002032,6.59e-11,32;CL:0000037,6.59e-11,32;CL:0000837,6.59e-11,32;CL:0000945,8.99e-11,1;CL:0000236,8.99e-11,1;CL:0000826,8.99e-11,1;CL:0000738,1.87e-09,17;CL:0002087,1.87e-09,17;CL:0000084,1.41e-08,11;CL:0000827,1.41e-08,11;CL:0002320,1.45e-07,46;CL:0000134,1.45e-07,46;CL:0000553,1.63e-07,6;CL:0000556,1.63e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.15e-12!6;UBERON:0004457!2.15e-12!6;UBERON:0000042!2.15e-12!6;UBERON:0004854!2.15e-12!6;UBERON:0009034!2.15e-12!6;UBERON:0002095!2.15e-12!6;UBERON:0004782!2.15e-12!6;UBERON:0003281!2.15e-12!6;UBERON:0009664!2.15e-12!6;UBERON:0002296!2.15e-12!6;UBERON:0005602!2.15e-12!6;UBERON:0001179!2.15e-12!6;UBERON:0006293!2.15e-12!6;UBERON:0002193!1.06e-11!48;UBERON:0002465!2.96e-08!3;UBERON:0002390!3.28e-08!45;UBERON:0003061!3.28e-08!45;UBERON:0004177!1.94e-07!29;UBERON:0000945!3.65e-07!16;UBERON:0010039!3.65e-07!16;UBERON:0003887!3.83e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,4.54e-30,3;UBERON:0001962,2.50e-20,2;UBERON:0001961,2.50e-20,2;UBERON:0001744,2.50e-20,2;UBERON:0000029,1.83e-11,1;UBERON:0001097,1.83e-11,1;UBERON:0003968,1.83e-11,1;UBERON:0001467,1.83e-11,1;UBERON:0003199,7.19e-11,1;UBERON:0002384,1.45e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0,0,0,0,0,0,0,0.404950534779652,0,1.89277299214943,3.29074640653773,0.42438965179803,0,1.68794617041505,1.30599894569468,2.23989391910769,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.73238497482646,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0,0,0,0,0,0,0,0.404950534779652,0,1.89277299214943,3.29074640653773,0.42438965179803,0,1.68794617041505,1.30599894569468,2.23989391910769,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.73238497482646,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Ccr6 | |||
}} | }} |
Latest revision as of 22:59, 26 September 2015
Short description: | p5@Ccr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ccr6_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | 64bp_to_NM_001190333, uc008ajd.2_5end |
EntrezGene: | Ccr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.80e-14 | 25 |
lymphoid lineage restricted progenitor cell | 3.11e-13 | 12 |
lymphocyte | 3.01e-12 | 13 |
common lymphoid progenitor | 3.01e-12 | 13 |
regulatory T cell | 2.31e-11 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.31e-11 | 1 |
hematopoietic cell | 6.59e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.59e-11 | 32 |
hematopoietic stem cell | 6.59e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.59e-11 | 32 |
lymphocyte of B lineage | 8.99e-11 | 1 |
B cell | 8.99e-11 | 1 |
pro-B cell | 8.99e-11 | 1 |
leukocyte | 1.87e-09 | 17 |
nongranular leukocyte | 1.87e-09 | 17 |
T cell | 1.41e-08 | 11 |
pro-T cell | 1.41e-08 | 11 |
connective tissue cell | 1.45e-07 | 46 |
mesenchymal cell | 1.45e-07 | 46 |
megakaryocyte progenitor cell | 1.63e-07 | 6 |
megakaryocyte | 1.63e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 4.54e-30 | 3 |
gut-associated lymphoid tissue | 2.50e-20 | 2 |
mucosa-associated lymphoid tissue | 2.50e-20 | 2 |
lymphoid tissue | 2.50e-20 | 2 |
lymph node | 1.83e-11 | 1 |
axillary lymph node | 1.83e-11 | 1 |
peripheral lymph node | 1.83e-11 | 1 |
shoulder | 1.83e-11 | 1 |
egg chamber | 7.19e-11 | 1 |
connective tissue | 1.45e-07 | 46 |