FFCP PHASE1:Mm9::chr11:114995235..114995241,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=246746|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=63bp_to_ENSMUST00000146254_5end|description=CAGE_peak_5_at_Cd300lf_5end|id=chr11:114995235..114995241,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.61e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6|ontology_enrichment_uberon=UBERON:0002193!1.89e-09!48;UBERON:0001474!2.82e-08!22;UBERON:0004765!2.82e-08!22;UBERON:0001434!2.82e-08!22;UBERON:0002204!3.84e-08!32;UBERON:0002390!3.47e-07!45;UBERON:0003061!3.47e-07!45;UBERON:0007823!5.01e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0002204,2.51e-07,32;UBERON:0000383,8.12e-07,10|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.137114433605739,1.27316895539409,0,0.992909512008853,1.56719873483361,0.639969691173627,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,4.60384793810598,3.1253413780952,1.57057123192139,10.5881667845583,9.56263678941824,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,1.55025282754142,0.159454768657487,0,0.345369963731791,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0.206386867963223,0.740778109478847,0.376736914009382,0.410082683163076,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0.39736270956253,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0.220591419119515,0|short_description=p5@Cd300lf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246746 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=63bp_to_ENSMUST00000146254_5end | |||
|cluster_id=chr11:114995235..114995241,- | |||
|description=CAGE_peak_5_at_Cd300lf_5end | |||
|id=chr11:114995235..114995241,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.61e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.89e-09!48;UBERON:0001474!2.82e-08!22;UBERON:0004765!2.82e-08!22;UBERON:0001434!2.82e-08!22;UBERON:0002204!3.84e-08!32;UBERON:0002390!3.47e-07!45;UBERON:0003061!3.47e-07!45;UBERON:0007823!5.01e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0002204,2.51e-07,32;UBERON:0000383,8.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.137114433605739,1.27316895539409,0,0.992909512008853,1.56719873483361,0.639969691173627,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,4.60384793810598,3.1253413780952,1.57057123192139,10.5881667845583,9.56263678941824,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,1.55025282754142,0.159454768657487,0,0.345369963731791,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0.206386867963223,0.740778109478847,0.376736914009382,0.410082683163076,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0.39736270956253,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p5@Cd300lf | |||
}} |
Latest revision as of 22:59, 26 September 2015
Short description: | p5@Cd300lf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cd300lf_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 63bp_to_ENSMUST00000146254_5end |
EntrezGene: | Cd300lf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.61e-07 | 9 |
striated muscle tissue | 1.61e-07 | 9 |
muscle tissue | 1.61e-07 | 9 |
multilaminar epithelium | 1.61e-07 | 9 |
epithelial vesicle | 1.61e-07 | 9 |
musculature | 1.61e-07 | 9 |
somite | 1.61e-07 | 9 |
myotome | 1.61e-07 | 9 |
presomitic mesoderm | 1.61e-07 | 9 |
presumptive segmental plate | 1.61e-07 | 9 |
dermomyotome | 1.61e-07 | 9 |
trunk paraxial mesoderm | 1.61e-07 | 9 |
musculoskeletal system | 2.51e-07 | 32 |
musculature of body | 8.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.08e-21 | 3 |
muscle cancer | 2.08e-21 | 3 |
organ system cancer | 5.11e-11 | 6 |