FFCP PHASE1:Mm9::chr11:115569852..115569928,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:115569852..115569928,-
|short_description=p1@Grb2
|description=CAGE_peak_1_at_Grb2_5end
|association_with_transcript=0bp_to_ENSMUST00000021090,ENSMUST0000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14784 | |EntrezGene=14784 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q60631,B1AT92,Q3U5I5 | |UniProt=Q60631,B1AT92,Q3U5I5 | ||
|association_with_transcript=0bp_to_ENSMUST00000021090,ENSMUST00000106495,ENSMUST00000106500,NM_008163,uc007mik.1_5end | |||
|cluster_id=chr11:115569852..115569928,- | |||
|description=CAGE_peak_1_at_Grb2_5end | |||
|id=chr11:115569852..115569928,- | |||
|ontology_enrichment_celltype=CL:0000144!4.69e-08!121;CL:0000012!4.69e-08!121;CL:0002371!3.98e-07!118;CL:0000988!5.96e-07!32;CL:0002032!5.96e-07!32;CL:0000037!5.96e-07!32;CL:0000566!5.96e-07!32;CL:0000837!5.96e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.96e-07,32;CL:0002032,5.96e-07,32;CL:0000037,5.96e-07,32;CL:0000837,5.96e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-16!48;UBERON:0002390!3.96e-15!45;UBERON:0003061!3.96e-15!45;UBERON:0000064!1.16e-12!99;UBERON:0002405!1.41e-11!70;UBERON:0004177!1.69e-08!29;UBERON:0002371!9.45e-08!16;UBERON:0002370!7.87e-07!23;UBERON:0000974!7.87e-07!23;UBERON:0004807!7.87e-07!23;UBERON:0005058!7.87e-07!23;UBERON:0003351!7.87e-07!23;UBERON:0009113!7.87e-07!23;UBERON:0003295!7.87e-07!23;UBERON:0009722!7.87e-07!23;UBERON:0005562!7.87e-07!23;UBERON:0007690!7.87e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.10e-16,48;UBERON:0002405,1.10e-16,48;UBERON:0002390,3.96e-15,45;UBERON:0003061,3.96e-15,45;UBERON:0004177,1.69e-08,29;UBERON:0005057,1.69e-08,29;UBERON:0002371,9.45e-08,16;UBERON:0000077,5.23e-07,35;UBERON:0002370,7.87e-07,23;UBERON:0000974,7.87e-07,23;UBERON:0004807,7.87e-07,23;UBERON:0005058,7.87e-07,23;UBERON:0003351,7.87e-07,23;UBERON:0009113,7.87e-07,23;UBERON:0003295,7.87e-07,23;UBERON:0009722,7.87e-07,23;UBERON:0005562,7.87e-07,23;UBERON:0007690,7.87e-07,23 | |||
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|phase1_expression=57.9738826519354,255.449998392012,248.884583946076,171.194743599666,172.308131101543,100.559683875222,99.7525975342895,112.853784687938,118.966470218158,111.414714529269,69.514495099555,77.6980828614577,107.514058396797,109.625184633423,84.6098795011783,80.5851564211507,56.6645121283799,190.223685711017,189.766376110342,214.316774158005,57.0640476913678,124.312270903508,85.9347306267097,117.114453484774,126.863332430145,203.852347260832,162.397272551971,150.614391647436,97.8620610200326,99.5519012551727,109.09141124241,27.9413496322238,28.9080450164748,31.6963362030877,57.7703239502549,61.1743494919252,53.2882019844783,441.550870427438,337.536868834282,384.789951820742,468.232264472687,470.618339136369,477.256677029624,71.3834957921523,65.996382223904,86.6340670203137,73.5447863687157,61.9191444120468,67.4436580994828,61.050988309325,55.8545822285196,50.3133975277401,285.230430298152,127.663736993997,131.076581665561,65.6011561891665,55.0144204682413,80.9605184875584,78.7011032743835,74.5877280773566,69.0876229821735,84.0334439531448,71.1435836888911,377.057981540906,378.735816863151,414.209907013576,171.371263216527,138.702808221081,76.9376923328904,80.8685570606827,93.1739578786622,94.8361268220628,88.7891534625486,83.6612158638136,88.9445971049233,73.5375029288017,82.5869107495415,88.8703873072907,85.0980194239589,81.1100669540692,96.245001069735,82.8252259185248,98.8307816464889,95.1068810953539,82.9694485428079,74.5410321248379,75.5993625043237,84.8117478505118,80.4212173198415,96.7315969366855,57.9728977403356,80.8798444362503,102.67567138987,71.2408212961919,51.3323369783659,56.0033608871669,69.5199879652172,43.4597322574047,41.565760736459,43.8141072392822,68.5907454312434,51.3305909657271,122.30651505919,184.877342819866,62.9988929342633,57.2593295973723,55.6076889516262,68.3961439517169,154.068040770067,96.9327168093306,74.4252051826723,80.0744207960931,86.0195804765098,89.3785258477052,72.5522323027299,96.2606089585314,69.2145909656247,52.0557684911682,116.768592857383,58.0742991311199,80.6071542380436,74.6707889828242,68.9649516507052,103.937182939099,121.479089951804,87.3663128813382,105.676939814222,142.776849976431,123.1310500338,79.389038884556,80.9776066988969,80.2931310001204,84.3047952932541,116.09481762797,90.3877993834086,93.6132087900962,64.3624779533999,88.0801351919459,55.5990068554084,45.4554408714784,51.0072136413799,54.4867987507331,48.0765886580282,51.6917525176503,46.9451844144162,51.5017155545096,53.6910881727246,45.0143865085887,61.0057419999943,54.8407632486676,48.3865591450859,53.2645629799007,52.8289773528636,56.416850976591,58.6479088762639,56.7247660432706,127.100586903696,111.174295873557,130.715209721973,54.474078176837,54.6445719755954,62.1214112040501,57.7657154827913,53.5198710352938,58.4672357843164,70.9228531488744,65.1904365401075,65.8556530950836,54.469310321362,52.8619234334687,63.0715338266758,66.3747942911009,57.5221302062553,70.5925762679556,79.0690206601118,83.2498314148411,132.167513193519,81.9796756656987,50.3360271263152,53.1821978560404,47.5520932278524,53.0427669759391,52.7035963912343,61.8233284865817,97.7529866781694,65.2207860707083,77.1599091016827,64.8598098854152,75.6460658022186,88.9831214567679,82.1324589523838,83.0419109470711,68.6597801450156,57.9239958931325,50.7184810528862,55.5968125017708,50.0397416892474,56.9502857509387,63.4262467356301,62.2914824473921,55.7345483836881,57.7498727154026,64.0337674508242,54.7251946748788,57.7883445632817,60.9376324562954,70.595322243199,62.2237072161235,73.3322453130489,69.6224652630962,67.1239838848646,68.0912304706442,64.6956929373095,77.0331761673802,77.0733052592965,76.0262422620806,67.8122223112828,76.7085198967754,89.6052972308033,54.5735265898996,55.0821620374047,54.997407791161,59.1419425687025,63.3173653130064,65.9380885254258,72.3945833552434,66.5220308128126,68.2111244118227,78.7706557167986,94.8768592204123,93.9406301350472,89.8270653791187,248.805618499799,201.789008696741,63.4375912194557,60.1542106944317,83.8074079736274,89.432516869851,73.1149856379972,59.3306678930277,44.8021671571084,44.1195781055201,52.3478856490701,47.0768531966527,59.2644473059168,53.7845408498782,41.2906915708392,49.3912399870117,58.897878914032,178.654651930525,57.059914253724,69.9797822412313,61.8970445543589,77.7009279200642,63.7176664031822,55.3539850433358,55.0228873675847,51.6777918531161,59.6509823619161,57.4903726655144,72.1014937939337,57.4383292574459,56.326585784786,68.5799764720721,60.0886068877493,59.8186150839484,71.8327568140493,56.7192446198627,69.8536892426874,68.1591771400464,59.2316380365194,71.3475270408282,68.9460396322887,68.8090784998994,102.551536423841,93.6297753218085,45.4288499993222,58.6995060471669,55.3822983566956,60.4938637029403,60.6411507535933,62.8659646023585,90.0675785186239,95.308605233402,133.962770545517,90.1910612999282,89.4489567195707,82.31701571105,95.8226536324386,128.802111515272,114.395483385865,118.818783022786,121.063177052675,57.2802370809068,60.1038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| ||
|short_description=p1@Grb2 | |||
}} | }} |
Latest revision as of 23:26, 26 September 2015
Short description: | p1@Grb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000021090, ENSMUST00000106495, ENSMUST00000106500, NM_008163, uc007mik.1_5end |
EntrezGene: | Grb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.96e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.96e-07 | 32 |
hematopoietic stem cell | 5.96e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.96e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.10e-16 | 48 |
immune system | 1.10e-16 | 48 |
hematopoietic system | 3.96e-15 | 45 |
blood island | 3.96e-15 | 45 |
hemopoietic organ | 1.69e-08 | 29 |
immune organ | 1.69e-08 | 29 |
bone marrow | 9.45e-08 | 16 |
mixed endoderm/mesoderm-derived structure | 5.23e-07 | 35 |
thymus | 7.87e-07 | 23 |
neck | 7.87e-07 | 23 |
respiratory system epithelium | 7.87e-07 | 23 |
hemolymphoid system gland | 7.87e-07 | 23 |
pharyngeal epithelium | 7.87e-07 | 23 |
thymic region | 7.87e-07 | 23 |
pharyngeal gland | 7.87e-07 | 23 |
entire pharyngeal arch endoderm | 7.87e-07 | 23 |
thymus primordium | 7.87e-07 | 23 |
early pharyngeal endoderm | 7.87e-07 | 23 |