FFCP PHASE1:Mm9::chr2:74550015..74550057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15434 | |EntrezGene=15434 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=P09027,Q3UZR4 | |UniProt=P09027,Q3UZR4 | ||
|association_with_transcript=0bp_to_NM_010468,uc008kee.1_5end | |association_with_transcript=0bp_to_NM_010468,uc008kee.1_5end | ||
|cluster_id=chr2:74550015..74550057,+ | |||
|description=CAGE_peak_2_at_Hoxd3_5end | |description=CAGE_peak_2_at_Hoxd3_5end | ||
|id=chr2:74550015..74550057,+ | |id=chr2:74550015..74550057,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!8.72e-15!21;UBERON:0003133!8.30e-12!24;UBERON:0005156!1.63e-11!26;UBERON:0000990!1.63e-11!26;UBERON:0002113!6.60e-10!14;UBERON:0003918!6.60e-10!14;UBERON:0005095!6.60e-10!14;UBERON:0007687!6.60e-10!14;UBERON:0000991!1.76e-09!18;UBERON:0005564!1.76e-09!18;UBERON:0006554!5.40e-09!16;UBERON:0001008!6.11e-09!17;UBERON:0004176!9.00e-09!17;UBERON:0009196!9.00e-09!17;UBERON:0009117!9.00e-09!17;UBERON:0003135!1.22e-07!15;UBERON:0000473!6.42e-07!14;UBERON:0003101!9.05e-07!16;UBERON:0000079!9.05e-07!16 | |ontology_enrichment_uberon=UBERON:0000489!8.72e-15!21;UBERON:0003133!8.30e-12!24;UBERON:0005156!1.63e-11!26;UBERON:0000990!1.63e-11!26;UBERON:0002113!6.60e-10!14;UBERON:0003918!6.60e-10!14;UBERON:0005095!6.60e-10!14;UBERON:0007687!6.60e-10!14;UBERON:0000991!1.76e-09!18;UBERON:0005564!1.76e-09!18;UBERON:0006554!5.40e-09!16;UBERON:0001008!6.11e-09!17;UBERON:0004176!9.00e-09!17;UBERON:0009196!9.00e-09!17;UBERON:0009117!9.00e-09!17;UBERON:0003135!1.22e-07!15;UBERON:0000473!6.42e-07!14;UBERON:0003101!9.05e-07!16;UBERON:0000079!9.05e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,3.52e-19,21;UBERON:0003133,8.30e-13,24;UBERON:0005156,8.45e-13,26;UBERON:0000990,8.45e-13,26;UBERON:0002113,1.12e-12,14;UBERON:0003918,1.12e-12,14;UBERON:0011143,1.12e-12,14;UBERON:0005095,1.12e-12,14;UBERON:0007687,1.12e-12,14;UBERON:0006554,1.85e-11,18;UBERON:0000991,2.25e-11,18;UBERON:0005564,2.25e-11,18;UBERON:0001008,1.49e-10,19;UBERON:0004176,1.92e-10,17;UBERON:0009196,1.92e-10,17;UBERON:0009117,1.92e-10,17;UBERON:0003135,5.86e-09,15;UBERON:0003101,3.96e-08,16;UBERON:0000079,3.96e-08,16;UBERON:0000473,5.08e-08,14;UBERON:0002240,1.13e-07,6;UBERON:0005174,1.13e-07,6;UBERON:0001137,1.13e-07,6;UBERON:0001948,9.15e-07,5;UBERON:0002315,9.15e-07,5 | |||
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| ||
|short_description=p2@Hoxd3 | |short_description=p2@Hoxd3 | ||
}} | }} |
Latest revision as of 23:29, 26 September 2015
Short description: | p2@Hoxd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | 0bp_to_NM_010468, uc008kee.1_5end |
EntrezGene: | Hoxd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 3.52e-19 | 21 |
reproductive organ | 8.30e-13 | 24 |
reproductive structure | 8.45e-13 | 26 |
reproductive system | 8.45e-13 | 26 |
kidney | 1.12e-12 | 14 |
kidney mesenchyme | 1.12e-12 | 14 |
upper urinary tract | 1.12e-12 | 14 |
kidney rudiment | 1.12e-12 | 14 |
kidney field | 1.12e-12 | 14 |
urinary system structure | 1.85e-11 | 18 |
gonad | 2.25e-11 | 18 |
gonad primordium | 2.25e-11 | 18 |
renal system | 1.49e-10 | 19 |
external genitalia | 1.92e-10 | 17 |
indifferent external genitalia | 1.92e-10 | 17 |
indifferent gonad | 1.92e-10 | 17 |
male reproductive organ | 5.86e-09 | 15 |
male organism | 3.96e-08 | 16 |
male reproductive system | 3.96e-08 | 16 |
testis | 5.08e-08 | 14 |
spinal cord | 1.13e-07 | 6 |
dorsal region element | 1.13e-07 | 6 |
dorsum | 1.13e-07 | 6 |
regional part of spinal cord | 9.15e-07 | 5 |
gray matter of spinal cord | 9.15e-07 | 5 |