FFCP PHASE1:Mm9::chr6:18120758..18120780,+: Difference between revisions
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{{FFCP|EntrezGene=12638|HGNC=|MCL_coexpression_id=1705|UniProt=F6U9G7,E9PY75|association_with_transcript=0bp_to_ENSMUST00000129452,ENSMUST00000167351_5end|description=CAGE_peak_3_at_Cftr_5end|id=chr6:18120758..18120780,+|ontology_enrichment_celltype=CL:0002563!2.15e-09!9;CL:0002251!2.15e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,8.89e-17,9;CL:0002251,8.89e-17,9;CL:0000239,3.91e-11,6;CL:0000677,3.91e-11,6;CL:0000584,3.91e-11,6;CL:0000075,2.03e-09,7;CL:0002076,2.95e-09,15;CL:0000066,2.37e-07,25;CL:0002250,3.06e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.47e-18!59;UBERON:0000160!4.84e-17!43;UBERON:0000344!6.66e-15!15;UBERON:0004119!1.96e-13!130;UBERON:0000925!1.96e-13!130;UBERON:0006595!1.96e-13!130;UBERON:0001007!2.27e-13!128;UBERON:0001555!2.27e-13!128;UBERON:0007026!2.27e-13!128;UBERON:0001242!6.71e-13!13;UBERON:0000060!6.71e-13!13;UBERON:0001262!6.71e-13!13;UBERON:0004786!6.71e-13!13;UBERON:0004921!4.50e-12!126;UBERON:0004185!4.50e-12!126;UBERON:0003350!2.15e-09!9;UBERON:0004808!2.15e-09!9;UBERON:0001277!2.15e-09!9;UBERON:0002048!6.02e-09!14;UBERON:0000117!6.02e-09!14;UBERON:0000171!6.02e-09!14;UBERON:0000170!6.02e-09!14;UBERON:0005597!6.02e-09!14;UBERON:0000118!6.02e-09!14;UBERON:0004923!6.30e-08!24;UBERON:0000485!4.27e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.77e-49,31;UBERON:0005409,3.48e-34,47;UBERON:0000344,1.67e-27,15;UBERON:0001242,1.35e-23,13;UBERON:0001262,1.35e-23,13;UBERON:0004786,1.35e-23,13;UBERON:0001007,3.20e-20,116;UBERON:0001555,3.20e-20,116;UBERON:0007026,3.20e-20,116;UBERON:0004119,1.05e-19,118;UBERON:0000925,1.05e-19,118;UBERON:0006595,1.05e-19,118;UBERON:0004921,6.70e-18,114;UBERON:0003350,8.89e-17,9;UBERON:0004808,8.89e-17,9;UBERON:0001277,8.89e-17,9;UBERON:0004923,1.27e-15,24;UBERON:0000485,2.36e-13,11;UBERON:0002108,1.04e-08,4;UBERON:0000331,5.25e-07,3;UBERON:0002116,5.25e-07,3;UBERON:0001204,5.25e-07,3;UBERON:0001168,5.25e-07,3|phase1_expression=0,3.14077866875425,5.45999087267443,2.41971369045464,3.50627010962443,10.9121526742728,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,17.9191513528615,15.5998311125676,0.57423196411502,4.73838195774982,9.04979177280734,14.0617330397717,7.81293402255785,17.5167103417691,0,0,0,15.5979874665688,15.2935873729813,19.3960888449251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,20.5030937339934,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,6.31806896084187,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0.639864751605702,2.09013004674395,1.80414445850931,2.01683524623343,2.66853652613844,1.33157938278791,7.59246498471219,2.47048432086016,1.00534083520108,1.98956472041151,1.55971269695296,6.29173586057955,5.83572734661674,8.56307474993779,0,0.342745537829186,0,0.407302655690628,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.977789858652155,1.18821560042632,1.17345124144251,1.00503754465089,1.90434912708811,0.975668239288994,1.41871629695572,0.44292937929755,1.59454768657487,0.327726629431476,1.03610989119537,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0.162886959353576,2.14461159864296,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,7.86998258900597,0,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.406638934253697,1.40406943068342,0.627264888043406,0.655087691238533,0.674321731924103,0.826534557253359,0.523511883968059,15.8130267415987,9.32008969630389,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,6.41030684935428,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0,1.2673964994512,0.188626341386076,0.37456602987953,0.128050304809739,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p3@Cftr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12638 | |||
|HGNC= | |||
|MCL_coexpression_id=1705 | |||
|TSSclassifier=NA | |||
|UniProt=F6U9G7,E9PY75 | |||
|association_with_transcript=0bp_to_ENSMUST00000129452,ENSMUST00000167351_5end | |||
|cluster_id=chr6:18120758..18120780,+ | |||
|description=CAGE_peak_3_at_Cftr_5end | |||
|id=chr6:18120758..18120780,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.15e-09!9;CL:0002251!2.15e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.89e-17,9;CL:0002251,8.89e-17,9;CL:0000239,3.91e-11,6;CL:0000677,3.91e-11,6;CL:0000584,3.91e-11,6;CL:0000075,2.03e-09,7;CL:0002076,2.95e-09,15;CL:0000066,2.37e-07,25;CL:0002250,3.06e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.47e-18!59;UBERON:0000160!4.84e-17!43;UBERON:0000344!6.66e-15!15;UBERON:0004119!1.96e-13!130;UBERON:0000925!1.96e-13!130;UBERON:0006595!1.96e-13!130;UBERON:0001007!2.27e-13!128;UBERON:0001555!2.27e-13!128;UBERON:0007026!2.27e-13!128;UBERON:0001242!6.71e-13!13;UBERON:0000060!6.71e-13!13;UBERON:0001262!6.71e-13!13;UBERON:0004786!6.71e-13!13;UBERON:0004921!4.50e-12!126;UBERON:0004185!4.50e-12!126;UBERON:0003350!2.15e-09!9;UBERON:0004808!2.15e-09!9;UBERON:0001277!2.15e-09!9;UBERON:0002048!6.02e-09!14;UBERON:0000117!6.02e-09!14;UBERON:0000171!6.02e-09!14;UBERON:0000170!6.02e-09!14;UBERON:0005597!6.02e-09!14;UBERON:0000118!6.02e-09!14;UBERON:0004923!6.30e-08!24;UBERON:0000485!4.27e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.77e-49,31;UBERON:0005409,3.48e-34,47;UBERON:0000344,1.67e-27,15;UBERON:0001242,1.35e-23,13;UBERON:0001262,1.35e-23,13;UBERON:0004786,1.35e-23,13;UBERON:0001007,3.20e-20,116;UBERON:0001555,3.20e-20,116;UBERON:0007026,3.20e-20,116;UBERON:0004119,1.05e-19,118;UBERON:0000925,1.05e-19,118;UBERON:0006595,1.05e-19,118;UBERON:0004921,6.70e-18,114;UBERON:0003350,8.89e-17,9;UBERON:0004808,8.89e-17,9;UBERON:0001277,8.89e-17,9;UBERON:0004923,1.27e-15,24;UBERON:0000485,2.36e-13,11;UBERON:0002108,1.04e-08,4;UBERON:0000331,5.25e-07,3;UBERON:0002116,5.25e-07,3;UBERON:0001204,5.25e-07,3;UBERON:0001168,5.25e-07,3 | |||
|phase1_expression=0,3.14077866875425,5.45999087267443,2.41971369045464,3.50627010962443,10.9121526742728,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,17.9191513528615,15.5998311125676,0.57423196411502,4.73838195774982,9.04979177280734,14.0617330397717,7.81293402255785,17.5167103417691,0,0,0,15.5979874665688,15.2935873729813,19.3960888449251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,20.5030937339934,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,6.31806896084187,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0.639864751605702,2.09013004674395,1.80414445850931,2.01683524623343,2.66853652613844,1.33157938278791,7.59246498471219,2.47048432086016,1.00534083520108,1.98956472041151,1.55971269695296,6.29173586057955,5.83572734661674,8.56307474993779,0,0.342745537829186,0,0.407302655690628,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.977789858652155,1.18821560042632,1.17345124144251,1.00503754465089,1.90434912708811,0.975668239288994,1.41871629695572,0.44292937929755,1.59454768657487,0.327726629431476,1.03610989119537,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0.162886959353576,2.14461159864296,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,7.86998258900597,0,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.406638934253697,1.40406943068342,0.627264888043406,0.655087691238533,0.674321731924103,0.826534557253359,0.523511883968059,15.8130267415987,9.32008969630389,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,6.41030684935428,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0,1.2673964994512,0.188626341386076,0.37456602987953,0.128050304809739,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Cftr | |||
}} |
Latest revision as of 23:44, 26 September 2015
Short description: | p3@Cftr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cftr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1705 |
Association with transcript: | 0bp_to_ENSMUST00000129452, ENSMUST00000167351_5end |
EntrezGene: | Cftr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.89e-17 | 9 |
epithelial cell of alimentary canal | 8.89e-17 | 9 |
brush border epithelial cell | 3.91e-11 | 6 |
gut absorptive cell | 3.91e-11 | 6 |
enterocyte | 3.91e-11 | 6 |
columnar/cuboidal epithelial cell | 2.03e-09 | 7 |
endo-epithelial cell | 2.95e-09 | 15 |
epithelial cell | 2.37e-07 | 25 |
intestinal crypt stem cell | 3.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.77e-49 | 31 |
gastrointestinal system | 3.48e-34 | 47 |
mucosa | 1.67e-27 | 15 |
intestinal mucosa | 1.35e-23 | 13 |
wall of intestine | 1.35e-23 | 13 |
gastrointestinal system mucosa | 1.35e-23 | 13 |
digestive system | 3.20e-20 | 116 |
digestive tract | 3.20e-20 | 116 |
primitive gut | 3.20e-20 | 116 |
endoderm-derived structure | 1.05e-19 | 118 |
endoderm | 1.05e-19 | 118 |
presumptive endoderm | 1.05e-19 | 118 |
subdivision of digestive tract | 6.70e-18 | 114 |
epithelium of mucosa | 8.89e-17 | 9 |
gastrointestinal system epithelium | 8.89e-17 | 9 |
intestinal epithelium | 8.89e-17 | 9 |
organ component layer | 1.27e-15 | 24 |
simple columnar epithelium | 2.36e-13 | 11 |
small intestine | 1.04e-08 | 4 |
ileal mucosa | 5.25e-07 | 3 |
ileum | 5.25e-07 | 3 |
mucosa of small intestine | 5.25e-07 | 3 |
wall of small intestine | 5.25e-07 | 3 |