FFCP PHASE1:Mm9::chr15:76199314..76199366,+: Difference between revisions
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{{FFCP|EntrezGene=59053|HGNC=|MCL_coexpression_id=155|UniProt=Q8C3I8|association_with_transcript=0bp_to_ENSMUST00000023213,NM_021555,uc007wjz.2_5end|description=CAGE_peak_1_at_Fam203a_5end|id=chr15:76199314..76199366,+|ontology_enrichment_celltype=CL:0000219!1.16e-09!54;CL:0000988!2.47e-09!32;CL:0002032!2.47e-09!32;CL:0000037!2.47e-09!32;CL:0000566!2.47e-09!32;CL:0000837!2.47e-09!32;CL:0000548!5.86e-09!115;CL:0000004!5.86e-09!115;CL:0000255!5.86e-09!115;CL:0002031!4.12e-08!25;CL:0002320!5.67e-08!46;CL:0000134!5.67e-08!46;CL:0000723!7.52e-08!91;CL:0000048!7.52e-08!91;CL:0002371!1.45e-07!118;CL:0000034!4.17e-07!97;CL:0000144!9.45e-07!121;CL:0000012!9.45e-07!121|ontology_enrichment_celltype_v019_2=CL:0000219,1.14e-09,54;CL:0000988,2.42e-09,32;CL:0002032,2.42e-09,32;CL:0000037,2.42e-09,32;CL:0000837,2.42e-09,32;CL:0002031,4.03e-08,25;CL:0002320,5.58e-08,46;CL:0000134,5.58e-08,46;CL:0000723,7.37e-08,91;CL:0000048,7.37e-08,91;CL:0000034,4.09e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.30e-09!45;UBERON:0003061!4.30e-09!45;UBERON:0002193!1.64e-08!48;UBERON:0002384!5.67e-08!46;UBERON:0000949!2.54e-07!72;UBERON:0002370!3.92e-07!23;UBERON:0000974!3.92e-07!23;UBERON:0004807!3.92e-07!23;UBERON:0005058!3.92e-07!23;UBERON:0003351!3.92e-07!23;UBERON:0009113!3.92e-07!23;UBERON:0003295!3.92e-07!23;UBERON:0009722!3.92e-07!23;UBERON:0005562!3.92e-07!23;UBERON:0007690!3.92e-07!23;UBERON:0004177!4.54e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.22e-09,45;UBERON:0003061,4.22e-09,45;UBERON:0002193,1.62e-08,48;UBERON:0002405,1.62e-08,48;UBERON:0002384,5.58e-08,46;UBERON:0000949,2.54e-07,72;UBERON:0002370,3.92e-07,23;UBERON:0000974,3.92e-07,23;UBERON:0004807,3.92e-07,23;UBERON:0005058,3.92e-07,23;UBERON:0003351,3.92e-07,23;UBERON:0009113,3.92e-07,23;UBERON:0003295,3.92e-07,23;UBERON:0009722,3.92e-07,23;UBERON:0005562,3.92e-07,23;UBERON:0007690,3.92e-07,23;UBERON:0004177,4.54e-07,29;UBERON:0005057,4.54e-07,29|phase1_expression=8.32774004944929,1.74487703819681,0.454999239389536,2.72217790176147,2.00358291978539,9.73699777088961,5.60670337429262,15.236552166106,45.61554597714,54.3029701067025,46.5712873573374,48.9003334641412,13.8672591244277,17.3966600813805,8.32774404539157,9.92128810210147,6.29605690315332,13.249410945046,12.3402990245165,16.1268067683251,2.89147186513637,9.23405846168233,9.66439219814061,7.03966660290989,5.96464130774642,1.72269589234506,6.8921919385452,6.46413698057667,4.18051522804023,11.3413558391969,12.8603696180077,33.6566256933605,27.6779154413057,15.8481681015439,15.0202842270663,17.4546377626417,14.0876855821035,0.837063261473815,3.1253413780952,0,1.76469446409304,1.36609096991689,0.971020706062307,9.81995180209503,10.1376931219515,8.44315059943735,8.60630478782843,9.3750817243592,10.1055644057857,8.94377535741704,7.13930750289349,7.18762821824858,10.5703041816374,4.35217285206807,3.6970317905671,4.63066984864705,5.15760191889762,5.67239301505187,10.7227724255587,12.6957835025288,10.1413024560989,12.876092218627,5.33576877666684,4.94944844504769,6.92206453796882,7.8152812644071,11.6844043102178,16.9056054341484,8.19147937236973,8.6403800532282,7.99234853135252,6.56997264128748,5.30084498283872,10.0442455356262,8.62609239164127,6.43453150627015,5.50579404996943,4.72443150915195,4.45458946443106,9.36392642884376,12.0763689555181,5.2091337055676,4.74611098302348,6.19038871034848,5.50073691996516,3.53554302568401,6.12198227436143,8.20157561631323,11.4346551933108,4.38315048619356,6.08715426273523,6.0229671388697,4.0798280022465,7.55584468292944,3.89865850468601,2.68816132258401,4.91555470461132,6.64678258054425,9.61208217030615,6.71345191569646,5.7745802108439,5.13305909657271,5.09610479413291,21.3320010945999,4.97929394325792,6.84071636782766,4.54972000513305,4.22480354960522,3.6251303710604,7.57054909230606,6.7659277438793,6.69824052286711,5.07354093963329,5.27529241934179,3.99801604261396,5.90632979249475,2.71914464507811,3.7595832799177,5.30766331169925,3.72063754879041,4.41683036920787,5.33362778448744,9.31958806090611,8.49064311333487,11.51956887474,6.64188343542338,7.30872259486114,9.59844369589452,6.98886248901856,6.74057877321702,5.03250663100489,12.4397808591736,4.51943232499919,2.81287003063364,5.194701113989,5.84068547043927,5.70300437561771,3.73220911830279,5.81262344397452,6.94458124425364,6.11566081924707,7.35686734187113,6.48223667299257,4.9732589885786,5.64702942956021,5.50888997224854,6.65282244374075,5.69147415625834,4.31135985865684,4.16033376369202,4.75068035242662,8.54863356467542,3.89266148915837,8.358051996532,4.11564272815887,5.17489093728082,4.91549231119264,10.2939162845886,11.6507034752193,4.14251545071004,5.62862543954631,4.32148947506436,4.26140524053378,4.9191057936851,3.5481435964097,3.25547522650571,3.75582761959467,4.32031766758527,2.96207729844265,2.79084688934462,2.83740833410495,3.65499968563331,3.07370161407471,3.08674763148855,5.46753866266731,9.46722433889417,0.991256348951394,6.87571473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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59053 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C3I8 | |||
|association_with_transcript=0bp_to_ENSMUST00000023213,NM_021555,uc007wjz.2_5end | |||
|cluster_id=chr15:76199314..76199366,+ | |||
|description=CAGE_peak_1_at_Fam203a_5end | |||
|id=chr15:76199314..76199366,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.16e-09!54;CL:0000988!2.47e-09!32;CL:0002032!2.47e-09!32;CL:0000037!2.47e-09!32;CL:0000566!2.47e-09!32;CL:0000837!2.47e-09!32;CL:0000548!5.86e-09!115;CL:0000004!5.86e-09!115;CL:0000255!5.86e-09!115;CL:0002031!4.12e-08!25;CL:0002320!5.67e-08!46;CL:0000134!5.67e-08!46;CL:0000723!7.52e-08!91;CL:0000048!7.52e-08!91;CL:0002371!1.45e-07!118;CL:0000034!4.17e-07!97;CL:0000144!9.45e-07!121;CL:0000012!9.45e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.14e-09,54;CL:0000988,2.42e-09,32;CL:0002032,2.42e-09,32;CL:0000037,2.42e-09,32;CL:0000837,2.42e-09,32;CL:0002031,4.03e-08,25;CL:0002320,5.58e-08,46;CL:0000134,5.58e-08,46;CL:0000723,7.37e-08,91;CL:0000048,7.37e-08,91;CL:0000034,4.09e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-09!45;UBERON:0003061!4.30e-09!45;UBERON:0002193!1.64e-08!48;UBERON:0002384!5.67e-08!46;UBERON:0000949!2.54e-07!72;UBERON:0002370!3.92e-07!23;UBERON:0000974!3.92e-07!23;UBERON:0004807!3.92e-07!23;UBERON:0005058!3.92e-07!23;UBERON:0003351!3.92e-07!23;UBERON:0009113!3.92e-07!23;UBERON:0003295!3.92e-07!23;UBERON:0009722!3.92e-07!23;UBERON:0005562!3.92e-07!23;UBERON:0007690!3.92e-07!23;UBERON:0004177!4.54e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.22e-09,45;UBERON:0003061,4.22e-09,45;UBERON:0002193,1.62e-08,48;UBERON:0002405,1.62e-08,48;UBERON:0002384,5.58e-08,46;UBERON:0000949,2.54e-07,72;UBERON:0002370,3.92e-07,23;UBERON:0000974,3.92e-07,23;UBERON:0004807,3.92e-07,23;UBERON:0005058,3.92e-07,23;UBERON:0003351,3.92e-07,23;UBERON:0009113,3.92e-07,23;UBERON:0003295,3.92e-07,23;UBERON:0009722,3.92e-07,23;UBERON:0005562,3.92e-07,23;UBERON:0007690,3.92e-07,23;UBERON:0004177,4.54e-07,29;UBERON:0005057,4.54e-07,29 | |||
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| |||
|short_description=p1@Fam203a | |||
}} |
Latest revision as of 00:43, 27 September 2015
Short description: | p1@Fam203a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam203a_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000023213, NM_021555, uc007wjz.2_5end |
EntrezGene: | Fam203a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.14e-09 | 54 |
hematopoietic cell | 2.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.42e-09 | 32 |
hematopoietic stem cell | 2.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.42e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 4.03e-08 | 25 |
connective tissue cell | 5.58e-08 | 46 |
mesenchymal cell | 5.58e-08 | 46 |
somatic stem cell | 7.37e-08 | 91 |
multi fate stem cell | 7.37e-08 | 91 |
stem cell | 4.09e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.22e-09 | 45 |
blood island | 4.22e-09 | 45 |
hemolymphoid system | 1.62e-08 | 48 |
immune system | 1.62e-08 | 48 |
connective tissue | 5.58e-08 | 46 |
endocrine system | 2.54e-07 | 72 |
thymus | 3.92e-07 | 23 |
neck | 3.92e-07 | 23 |
respiratory system epithelium | 3.92e-07 | 23 |
hemolymphoid system gland | 3.92e-07 | 23 |
pharyngeal epithelium | 3.92e-07 | 23 |
thymic region | 3.92e-07 | 23 |
pharyngeal gland | 3.92e-07 | 23 |
entire pharyngeal arch endoderm | 3.92e-07 | 23 |
thymus primordium | 3.92e-07 | 23 |
early pharyngeal endoderm | 3.92e-07 | 23 |
hemopoietic organ | 4.54e-07 | 29 |
immune organ | 4.54e-07 | 29 |