Personal tools

FFCP PHASE1:Mm9::chr9:66198272..66198322,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:66198272..66198322,+
|DHSsupport=NA
|short_description=p1@Herc1
|DPIdataset=NA
|description=CAGE_peak_1_at_Herc1_5end
|association_with_transcript=-10bp_to_ENSMUST00000042824_5end
|EntrezGene=235439
|EntrezGene=235439
|HGNC=
|HGNC=
|MCL_coexpression_id=2217
|TSSclassifier=NA
|UniProt=E9PZP8
|UniProt=E9PZP8
|association_with_transcript=-10bp_to_ENSMUST00000042824_5end
|cluster_id=chr9:66198272..66198322,+
|description=CAGE_peak_1_at_Herc1_5end
|id=chr9:66198272..66198322,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.31e-07!50;UBERON:0006238!1.31e-07!50;UBERON:0002021!2.14e-07!10;UBERON:0000411!2.14e-07!10;UBERON:0001950!2.14e-07!10;UBERON:0007811!3.05e-07!86;UBERON:0000033!3.24e-07!63;UBERON:0002616!3.56e-07!49;UBERON:0002791!5.74e-07!29;UBERON:0003528!5.74e-07!29;UBERON:0001893!5.74e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.14e-07,10;UBERON:0000411,2.14e-07,10;UBERON:0001950,2.14e-07,10;UBERON:0003528,5.74e-07,29;UBERON:0002791,5.74e-07,29;UBERON:0001893,5.74e-07,29;UBERON:0000073,5.83e-07,54
|phase1_expression=23.7020293715095,22.6834014965585,19.5649672937501,40.5302043151152,50.0895729946347,22.4958224361932,19.3898491694286,46.0970264686427,41.814250479045,40.7272275800269,11.4716038711088,12.2051403262865,53.243427008605,52.9767638659124,81.6118916448374,121.282685166506,135.71500435686,31.2307543704655,38.9404991440298,42.8633548316011,22.7065584703356,11.0212955832983,10.9703911438353,15.359272588167,16.0586496747019,22.3950466004858,17.230479846363,15.2984575206981,13.4916627814025,23.6908321974335,14.4124831925948,39.3719017544971,35.0586928923205,15.8481681015439,12.9983228888074,9.30914014007557,14.2918549383658,48.9682007962182,31.253413780952,36.6466620781659,65.8819266594736,53.2775478267588,39.8118489485546,9.19046771221714,7.50189291024408,6.05704282133549,3.9119567217402,4.36050312760893,2.63623419281366,5.24960727500565,2.51975558925653,4.31257693094915,28.3552604237574,56.5782470768849,36.2981303073861,15.1783067261209,17.4785398362642,10.8291139378263,25.4918740683093,17.9856932952491,17.1134478946668,2.71075625655306,5.33576877666684,4.94944844504769,11.8663963508037,1.4209602298922,2.69640099466564,3.45796474789399,30.7958148556179,23.3560273313825,26.2906201689228,13.4255962669788,12.589506834242,33.4399881856825,19.5524760877202,21.1420320920305,45.1475112097494,44.5628809917305,42.5490097119794,24.2670769423557,22.1400097517831,30.2129754922921,21.7762739221077,27.5753678915523,41.1027286519619,36.5339445987348,32.3183715413964,34.8566963693312,8.32988126665025,11.4113055761246,40.5810284182349,16.3480536626463,3.39985666853875,9.71465744948071,14.2950811838487,14.7848872742121,17.2746636762055,5.11290967734173,3.89679006904303,3.18005617059306,16.6195235336483,7.69958864485907,5.09610479413291,0,6.27824018932521,6.33399663687746,4.54972000513305,17.6985013564543,46.6088190564909,23.3054158331775,15.26670875542,15.8322048722313,15.2206228188999,19.1417753501831,24.8112172056337,14.8286577769017,13.5957232253906,25.7386855317443,49.538190909193,23.7797269422691,60.5105760581478,63.0337829075789,11.1835056730873,59.1417209963325,66.3946060598653,23.2465920239818,21.087461913042,13.197860081855,18.9334638338866,46.2853075760902,54.9000723382352,44.2303319437283,68.6606064759492,78.2489299430811,44.882217624865,56.9466833367829,16.1924588522003,40.3078584776701,13.8997517138521,22.7277204357392,17.0457780281142,17.9323641458109,16.2055916824814,23.811361218043,35.1068335620852,30.8754065886488,29.6097449608743,39.0642089815914,11.8562396113063,20.8016688184601,17.7710635405588,13.1517439456545,23.3559689349502,19.1538691587192,21.6071243228341,15.5246728118425,11.2354109970118,10.808612098818,12.7873574728017,19.0555710732662,17.12040237862,14.4049649168812,17.5191104333056,18.8893662477508,16.5065810789495,21.1605889722871,17.9743178937745,21.0177616260905,18.9243827400503,23.9684497555479,26.3473631024031,26.1697977491345,21.0768110679409,28.5859671959592,59.7223453922121,43.3228418116787,43.9456981368451,14.2803305998314,15.3567540385368,21.3657738111603,15.0774929746849,14.3195302482573,15.5664630691409,20.7345932462689,24.2009821387701,13.3406153326449,18.8501406600202,16.1154742353332,24.37051088989,25.1669434423182,22.2622191370935,28.8754846218832,4.36236172192088,15.994791765362,16.9061603509621,13.0336849821001,15.1282939990748,18.0950415317022,21.879841844993,19.4845395333075,20.2528358915373,18.6329717521919,18.3800628794032,51.2214474548409,52.4812516952252,66.5591852659167,71.6096228501415,78.1413997597831,61.6194561311036,50.059127916441,54.1531657428618,40.0859663254599,27.3159592401974,26.0498663367952,19.3463357331028,19.1959947239805,16.325164630494,17.8504102904446,23.6484083413254,14.4013472945568,16.7853925735287,13.2401166904647,15.7242466353296,20.6032696653433,20.4717531161972,29.074913530812,27.270879930371,22.1464689648775,29.1802226643201,26.2181303545181,25.3846923342867,28.3512154819763,18.0949540727127,15.7732648307426,19.6705709207614,17.1080782708934,35.1605792073264,44.8920759648138,2.45902418065013,38.3755809350647,15.1443945319803,16.3984272604588,22.6194567619439,21.9851294116348,18.9378872970035,18.6830510320629,19.4309136803949,23.380468632905,27.2748566783101,65.2282272336268,19.4457916735328,9.79360820169904,17.1031307321255,25.0754586918254,21.2392221343941,12.3818124439041,10.2790009368015,12.8251454234011,7.67784921490009,13.2197113615889,22.7416897988035,19.6308213917853,14.6163925137736,22.1225730555071,9.48767477174989,18.5643977846736,27.5756080660568,15.665315180724,7.63216234318252,16.9326257674958,25.3596534108451,22.2961022002588,22.5432158224906,11.5696680663548,17.1310346886509,13.5572525352845,17.421743446342,19.9512366059191,28.0948102450876,25.5123672446099,24.9488198966555,26.2625439592098,25.0673519501672,38.939313422207,71.936640815896,21.2578474002119,43.5207139318822,132.799762188307,104.981166889747,110.728635831957,28.21641937898,29.6697078926155,25.5669951538184,9.54670618015114,12.1789357528737,19.9253077784312,15.768779759983,14.2180041289839,22.4913440658563,22.2526171534954,23.9695021603474,20.6787194167383,18.4053262074346,16.1548221402601,16.3470952218415,13.6060056900021,10.7548018797113,13.2226808073952,11.7535439364735,18.4162176784948,18.7771581833206,22.7857673476913,34.813302349336,25.8495009283826,27.6508806007551,52.7738571449058,6.89265731986558,13.1470025170979,14.1613697045797,25.4217907847824,22.8483557998455,32.0921850218317,31.9009378697087,34.4295594323183,33.8358221548199,39.826343129052,38.203489249983,36.2718642984042,39.5043929373703,27.4343764174406,7.32553646134413,3.76798197759798,4.86865387455827,16.8074946808006,15.9530104133505,17.948859178192,17.7925754635625,15.5487352250963,56.4751842617067,68.1281350030622,61.8727154514548,75.2716938665352,67.8231694572936,86.1149043024259,70.8773625243396,59.8927200288213,83.3782032530936,65.7555595924811,16.0870388755474,23.5424675306608,27.4881105264156,32.5763000871514,23.89590053959,12.685202083051,24.4471400581777,28.0207677844896,25.0316983481616,22.7427490587418,26.6153264884752,26.0304351112785,21.9121127479525,23.8813818470162,24.2952033682244,25.2435656380029,30.0140404197176,22.3774695737898,22.6647245441819,24.1406229020412,25.7151939289062,22.7169031883952,27.4201618439419,26.7437406603484,23.4332357234173,24.6228508964779,23.7806364734604,26.0439014323464,22.4076787845672,26.3736867679137,23.9642736610832,29.2558312655423,20.0523211153148,23.0855893367089,27.0069255373598,24.9810577937946,20.3520499347505,22.346589621023,22.1894465199858,22.2797333310711,25.2735940826259
|phase1_expression=23.7020293715095,22.6834014965585,19.5649672937501,40.5302043151152,50.0895729946347,22.4958224361932,19.3898491694286,46.0970264686427,41.814250479045,40.7272275800269,11.4716038711088,12.2051403262865,53.243427008605,52.9767638659124,81.6118916448374,121.282685166506,135.71500435686,31.2307543704655,38.9404991440298,42.8633548316011,22.7065584703356,11.0212955832983,10.9703911438353,15.359272588167,16.0586496747019,22.3950466004858,17.230479846363,15.2984575206981,13.4916627814025,23.6908321974335,14.4124831925948,39.3719017544971,35.0586928923205,15.8481681015439,12.9983228888074,9.30914014007557,14.2918549383658,48.9682007962182,31.253413780952,36.6466620781659,65.8819266594736,53.2775478267588,39.8118489485546,9.19046771221714,7.50189291024408,6.05704282133549,3.9119567217402,4.36050312760893,2.63623419281366,5.24960727500565,2.51975558925653,4.31257693094915,28.3552604237574,56.5782470768849,36.2981303073861,15.1783067261209,17.4785398362642,10.8291139378263,25.4918740683093,17.9856932952491,17.1134478946668,2.71075625655306,5.33576877666684,4.94944844504769,11.8663963508037,1.4209602298922,2.69640099466564,3.45796474789399,30.7958148556179,23.3560273313825,26.2906201689228,13.4255962669788,12.589506834242,33.4399881856825,19.5524760877202,21.1420320920305,45.1475112097494,44.5628809917305,42.5490097119794,24.2670769423557,22.1400097517831,30.2129754922921,21.7762739221077,27.5753678915523,41.1027286519619,36.5339445987348,32.3183715413964,34.8566963693312,8.32988126665025,11.4113055761246,40.5810284182349,16.3480536626463,3.39985666853875,9.71465744948071,14.2950811838487,14.7848872742121,17.2746636762055,5.11290967734173,3.89679006904303,3.18005617059306,16.6195235336483,7.69958864485907,5.09610479413291,0,6.27824018932521,6.33399663687746,4.54972000513305,17.6985013564543,46.6088190564909,23.3054158331775,15.26670875542,15.8322048722313,15.2206228188999,19.1417753501831,24.8112172056337,14.8286577769017,13.5957232253906,25.7386855317443,49.538190909193,23.7797269422691,60.5105760581478,63.0337829075789,11.1835056730873,59.1417209963325,66.3946060598653,23.2465920239818,21.087461913042,13.197860081855,18.9334638338866,46.2853075760902,54.9000723382352,44.2303319437283,68.6606064759492,78.2489299430811,44.882217624865,56.9466833367829,16.1924588522003,40.3078584776701,13.8997517138521,22.7277204357392,17.0457780281142,17.9323641458109,16.2055916824814,23.811361218043,35.1068335620852,30.8754065886488,29.6097449608743,39.0642089815914,11.8562396113063,20.8016688184601,17.7710635405588,13.1517439456545,23.3559689349502,19.1538691587192,21.6071243228341,15.5246728118425,11.2354109970118,10.808612098818,12.7873574728017,19.0555710732662,17.12040237862,14.4049649168812,17.5191104333056,18.8893662477508,16.5065810789495,21.1605889722871,17.9743178937745,21.0177616260905,18.9243827400503,23.9684497555479,26.3473631024031,26.1697977491345,21.0768110679409,28.5859671959592,59.7223453922121,43.3228418116787,43.9456981368451,14.2803305998314,15.3567540385368,21.3657738111603,15.0774929746849,14.3195302482573,15.5664630691409,20.7345932462689,24.2009821387701,13.3406153326449,18.8501406600202,16.1154742353332,24.37051088989,25.1669434423182,22.2622191370935,28.8754846218832,4.36236172192088,15.994791765362,16.9061603509621,13.0336849821001,15.1282939990748,18.0950415317022,21.879841844993,19.4845395333075,20.2528358915373,18.6329717521919,18.3800628794032,51.2214474548409,52.4812516952252,66.5591852659167,71.6096228501415,78.1413997597831,61.6194561311036,50.059127916441,54.1531657428618,40.0859663254599,27.3159592401974,26.0498663367952,19.3463357331028,19.1959947239805,16.325164630494,17.8504102904446,23.6484083413254,14.4013472945568,16.7853925735287,13.2401166904647,15.7242466353296,20.6032696653433,20.4717531161972,29.074913530812,27.270879930371,22.1464689648775,29.1802226643201,26.2181303545181,25.3846923342867,28.3512154819763,18.0949540727127,15.7732648307426,19.6705709207614,17.1080782708934,35.1605792073264,44.8920759648138,2.45902418065013,38.3755809350647,15.1443945319803,16.3984272604588,22.6194567619439,21.9851294116348,18.9378872970035,18.6830510320629,19.4309136803949,23.380468632905,27.2748566783101,65.2282272336268,19.4457916735328,9.79360820169904,17.1031307321255,25.0754586918254,21.2392221343941,12.3818124439041,10.2790009368015,12.8251454234011,7.67784921490009,13.2197113615889,22.7416897988035,19.6308213917853,14.6163925137736,22.1225730555071,9.48767477174989,18.5643977846736,27.5756080660568,15.665315180724,7.63216234318252,16.9326257674958,25.3596534108451,22.2961022002588,22.5432158224906,11.5696680663548,17.1310346886509,13.5572525352845,17.421743446342,19.9512366059191,28.0948102450876,25.5123672446099,24.9488198966555,26.2625439592098,25.0673519501672,38.939313422207,71.936640815896,21.2578474002119,43.5207139318822,132.799762188307,104.981166889747,110.728635831957,28.21641937898,29.6697078926155,25.5669951538184,9.54670618015114,12.1789357528737,19.9253077784312,15.768779759983,14.2180041289839,22.4913440658563,22.2526171534954,23.9695021603474,20.6787194167383,18.4053262074346,16.1548221402601,16.3470952218415,13.6060056900021,10.7548018797113,13.2226808073952,11.7535439364735,18.4162176784948,18.7771581833206,22.7857673476913,34.813302349336,25.8495009283826,27.6508806007551,52.7738571449058,6.89265731986558,13.1470025170979,14.1613697045797,25.4217907847824,22.8483557998455,32.0921850218317,31.9009378697087,34.4295594323183,33.8358221548199,39.826343129052,38.203489249983,36.2718642984042,39.5043929373703,27.4343764174406,7.32553646134413,3.76798197759798,4.86865387455827,16.8074946808006,15.9530104133505,17.948859178192,17.7925754635625,15.5487352250963,56.4751842617067,68.1281350030622,61.8727154514548,75.2716938665352,67.8231694572936,86.1149043024259,70.8773625243396,59.8927200288213,83.3782032530936,65.7555595924811,16.0870388755474,23.5424675306608,27.4881105264156,32.5763000871514,23.89590053959,12.685202083051,24.4471400581777,28.0207677844896,25.0316983481616,22.7427490587418,26.6153264884752,26.0304351112785,21.9121127479525,23.8813818470162,24.2952033682244,25.2435656380029,30.0140404197176,22.3774695737898,22.6647245441819,24.1406229020412,25.7151939289062,22.7169031883952,27.4201618439419,26.7437406603484,23.4332357234173,24.6228508964779,23.7806364734604,26.0439014323464,22.4076787845672,26.3736867679137,23.9642736610832,29.2558312655423,20.0523211153148,23.0855893367089,27.0069255373598,24.9810577937946,20.3520499347505,22.346589621023,22.1894465199858,22.2797333310711,25.2735940826259
|short_description=p1@Herc1
}}
}}

Latest revision as of 00:48, 27 September 2015

Short description:p1@Herc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Herc1_5end
Coexpression cluster:MCL_coexpression_mm9:2217
Association with transcript: -10bp_to_ENSMUST00000042824_5end
EntrezGene:Herc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Herc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I450.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E946.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F240.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E453.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E852.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A181.61
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3121.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5135.72
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A642.86
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.06
GP2+ M cell, pool1.CNhs13228.11845-124H922.40
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B913.49
Ileum epithelium, pool2.CNhs13232.10253-104C123.69
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I339.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G635.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G848.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G965.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H253.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H439.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.30
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F344.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.32
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.86
Mouse Schwann, donor1.CNhs12507.11728-123D98.33
Mouse Schwann, donor2.CNhs12573.11746-123F911.41
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.70
accessory axillary lymph node, adult.CNhs10475.1063-29H946.61
adrenal gland, adult.CNhs10508.49-24D723.31
adrenal gland, embryo E14.CNhs11038.406-44C515.27
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F519.14
adrenal gland, neonate N00.CNhs11191.1311-23C124.81
adrenal gland, neonate N25.CNhs11223.1377-27I314.83
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H125.74
bone (os femoris), adult.CNhs10483.56-12G249.54
bone (os femoris), neonate N02.CNhs11227.1985-43F523.78
bone (os femoris), neonate N16.CNhs11225.1525-43A660.51
bone (os femoris), neonate N20.CNhs11195.1350-25C363.03
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B259.14
cerebellum, neonate N30.CNhs11135.1395-42I266.39
colon, adult.CNhs10468.36-18H723.25
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.09
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.93
corpora quadrigemina, adult.CNhs10501.16-22A446.29
corpus striatum, adult.CNhs10487.19-21D854.90
corpus striatum, neonate N00.CNhs11226.630-43F144.23
cortex, adult.CNhs10473.12-14D568.66
cortex, neonate N30.CNhs11107.1392-42F278.25
diencephalon, adult.CNhs10482.20-12F244.88
diencephalon, neonate N30.CNhs11201.1388-42B256.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A240.31
epididymis, adult.CNhs10490.58-23B213.90
eyeball, adult.CNhs10484.31-12G422.73
eyeball, embryo E12.CNhs11016.345-16C617.05
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D423.81
eyeball, neonate N00.CNhs11207.633-15C635.11
eyeball, neonate N01.CNhs11140.1532-43E730.88
eyeball, neonate N02.CNhs11205.1551-44G829.61
eyeball, neonate N16.CNhs11188.777-19A239.06
forelimb, embryo E11.CNhs10596.335-25E211.86
forelimb, embryo E12.CNhs10600.359-14H220.80
forelimb, embryo E13.CNhs10589.384-1E217.77
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E723.36
forelimb, embryo E17.CNhs10598.1517-43C419.15
forelimb, embryo E18.CNhs11008.1520-43B521.61
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.81
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E919.06
heart, embryo E12.CNhs11015.353-12F517.12
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D417.52
heart, embryo E15.CNhs11017.431-16C818.89
heart, embryo E16.CNhs11021.457-17C616.51
heart, embryo E17.CNhs11025.479-18E521.16
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E321.02
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G123.97
heart, neonate N16.CNhs11209.782-15G126.35
heart, neonate N20.CNhs11127.821-26I626.17
heart, neonate N25.CNhs11196.1351-25D321.08
heart, neonate N30.CNhs11202.1390-42D228.59
hippocampus, adult.CNhs10478.13-16E859.72
hippocampus, neonate N00.CNhs11228.627-43G143.32
intestinal mucosa, adult.CNhs10506.860-29I343.95
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D815.08
intestine, embryo E16.CNhs10585.463-22H414.32
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F720.73
intestine, neonate N00.CNhs11126.644-26D124.20
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B818.85
intestine, neonate N07.CNhs11095.720-20F216.12
intestine, neonate N10.CNhs11098.755-23A524.37
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E322.26
intestine, neonate N30.CNhs11131.1384-42G128.88
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F815.99
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I213.03
kidney, embryo E18.CNhs11001.1288-20C715.13
kidney, neonate N00.CNhs11214.646-21G718.10
kidney, neonate N10.CNhs11206.758-6D521.88
kidney, neonate N20.CNhs11113.832-19I119.48
kidney, neonate N25.CNhs11122.1353-25F320.25
kidney, neonate N30.CNhs11203.1385-42H118.63
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F851.22
liver, embryo E13.CNhs10524.378-3H652.48
liver, embryo E14.CNhs10594.409-16E166.56
liver, embryo E15.CNhs10520.433-16D771.61
liver, embryo E16.CNhs10523.462-17F578.14
liver, embryo E17.CNhs10510.481-18A361.62
liver, embryo E18.CNhs10579.499-43G450.06
liver, neonate N00.CNhs11117.641-24F454.15
liver, neonate N03.CNhs11123.1345-25G240.09
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H116.33
liver, neonate N30.CNhs11106.1382-42D117.85
lung, adult.CNhs10474.28-22B123.65
lung, embryo E12.CNhs10522.354-16G214.40
lung, embryo E14.CNhs10604.404-26F816.79
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A620.60
lung, embryo E18.CNhs10583.1287-20I620.47
lung, neonate N00.CNhs11224.640-42C629.07
lung, neonate N06.CNhs11212.683-20E527.27
lung, neonate N07.CNhs11111.715-19A322.15
lung, neonate N10.CNhs11219.750-23E629.18
lung, neonate N20.CNhs11109.822-18A426.22
lung, neonate N25.CNhs11119.1359-25C725.38
lung, neonate N30.CNhs11133.1394-42H228.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C235.16
medulla oblongata, neonate N30.CNhs11200.1396-42A344.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C238.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.94
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.27
olfactory brain, adult.CNhs10489.18-22I965.23
ovary, adult.CNhs10507.91-2I719.45
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I417.10
oviduct, adult pregnant day01.CNhs10500.988-6G625.08
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G922.74
pancreas, neonate N01.CNhs11138.1531-43D719.63
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B622.12
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G827.58
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C77.63
pituitary gland, embryo E14.CNhs11037.398-44A516.93
pituitary gland, embryo E15.CNhs10592.427-16B925.36
pituitary gland, embryo E16.CNhs11036.449-43F622.30
pituitary gland, embryo E17.CNhs11039.1265-44F522.54
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I717.13
placenta, adult pregnant day17.CNhs10464.577-18G313.56
prostate, adult.CNhs10470.859-1F817.42
skin, adult.CNhs10492.30-1C319.95
skin, neonate N00.CNhs11124.650-25G428.09
skin, neonate N03.CNhs11215.662-22H325.51
skin, neonate N06.CNhs11097.693-20I524.95
skin, neonate N10.CNhs11108.762-6C426.26
small intestine, neonate N16.CNhs11114.790-21I125.07
spinal cord, adult.CNhs10505.24-13C938.94
spleen, adult.CNhs10465.25-2G271.94
spleen, embryo E16.CNhs11035.461-43C121.26
spleen, embryo E18.CNhs11011.1271-21F243.52
spleen, neonate N10.CNhs11116.752-24D1132.80
spleen, neonate N20.CNhs11112.824-19H1104.98
spleen, neonate N25.CNhs11099.1354-25G3110.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.57
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C622.49
stomach, neonate N03.CNhs11193.1340-24B822.25
stomach, neonate N07.CNhs11210.718-18A923.97
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I118.41
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F513.61
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I511.75
testis, embryo E18.CNhs11027.503-18G518.42
testis, neonate N00.CNhs11189.1300-22B718.78
testis, neonate N07.CNhs11222.726-26I422.79
testis, neonate N10.CNhs11204.763-44D934.81
testis, neonate N20.CNhs11110.839-18H325.85
testis, neonate N30.CNhs11130.1391-42E227.65
thymus, adult.CNhs10471.38-12B552.77
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I213.15
thymus, embryo E16.CNhs11002.456-26C514.16
thymus, embryo E17.CNhs10581.478-18C125.42
thymus, embryo E18.CNhs10595.1273-19G422.85
thymus, neonate N02.CNhs11181.1541-43F832.09
thymus, neonate N03.CNhs11137.2104-43C731.90
thymus, neonate N06.CNhs11197.681-26C434.43
thymus, neonate N07.CNhs11211.713-19D333.84
thymus, neonate N10.CNhs11194.748-24E439.83
thymus, neonate N20.CNhs11186.820-7A238.20
thymus, neonate N25.CNhs11125.1362-25G736.27
thymus, neonate N30.CNhs11132.1393-42G239.50
tongue, adult.CNhs10499.32-1B427.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E416.81
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D517.79
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A156.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A268.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D775.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A467.82
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A586.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A670.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A759.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A883.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A965.76
whole body, embryo E11.CNhs11014.324-5I816.09
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H227.49
whole body, embryo E14.5.CNhs10578.420-27D232.58
whole body, embryo E14.CNhs10519.395-14B123.90
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.72
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.09
whole body, embryo E17.5.CNhs10513.490-9F927.01
whole body, embryo E17.CNhs10517.475-3I524.98
whole body, embryo E18.CNhs10516.493-3B320.35
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C622.19
whole body, neonate N06.CNhs10515.692-21D122.28
whole body, neonate N10.CNhs10518.761-6B425.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe2.14e-0710
visual cortex2.14e-0710
neocortex2.14e-0710
brain grey matter5.74e-0729
regional part of telencephalon5.74e-0729
telencephalon5.74e-0729
regional part of nervous system5.83e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66198272..66198322,%2B&oldid=4283552"