FFCP PHASE1:Mm9::chr4:45985160..45985197,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:45985160..45985197,+
|short_description=p2@Tdrd7
|description=CAGE_peak_2_at_Tdrd7_5end
|association_with_transcript=55bp_to_ENSMUST00000102929_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100121 | |EntrezGene=100121 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1H1 | |UniProt=Q8K1H1 | ||
|association_with_transcript=55bp_to_ENSMUST00000102929_5end | |||
|cluster_id=chr4:45985160..45985197,+ | |||
|description=CAGE_peak_2_at_Tdrd7_5end | |||
|id=chr4:45985160..45985197,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.57e-09!102;UBERON:0000924!1.57e-09!102;UBERON:0006601!1.57e-09!102;UBERON:0000073!2.71e-09!75;UBERON:0001016!2.71e-09!75;UBERON:0001017!8.33e-09!73;UBERON:0005743!8.33e-09!73;UBERON:0000033!8.71e-09!63;UBERON:0001049!6.95e-08!52;UBERON:0005068!6.95e-08!52;UBERON:0006241!6.95e-08!52;UBERON:0007135!6.95e-08!52;UBERON:0000955!1.70e-07!50;UBERON:0006238!1.70e-07!50;UBERON:0002346!1.75e-07!71;UBERON:0003075!1.75e-07!71;UBERON:0007284!1.75e-07!71;UBERON:0002616!4.03e-07!49;UBERON:0004111!4.82e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.18e-09,95;UBERON:0000924,1.18e-09,95;UBERON:0006601,1.18e-09,95;UBERON:0001016,2.71e-09,75;UBERON:0010314,5.58e-09,92;UBERON:0001017,8.31e-09,73;UBERON:0000073,1.44e-08,54;UBERON:0001049,6.94e-08,52;UBERON:0005068,6.94e-08,52;UBERON:0006241,6.94e-08,52;UBERON:0007135,6.94e-08,52;UBERON:0002346,1.01e-07,64;UBERON:0003075,1.01e-07,64;UBERON:0007284,1.01e-07,64;UBERON:0010371,3.26e-07,73;UBERON:0004111,4.93e-07,122 | |||
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|phase1_expression=7.52699581392532,4.88565570695105,3.63999391511629,4.23449895829562,9.01612313903425,3.3575854382378,3.03696432774183,0.129123323441576,0,0,0.171217968225505,0.239316476986009,0.342401459862411,0.524522414513984,1.66554880907831,1.82227740650843,1.39912375625629,2.83915948822414,3.56497527374921,2.54633791078818,18.5394372529332,0.893618560807968,1.82839852397255,2.71987118748791,2.52350209173887,2.29692785646008,2.58457197695445,2.15471232685889,3.6104449696711,3.02436155711917,2.43903561720835,1.90509202037889,1.84519436275371,0,1.44425809875637,1.32987716286794,1.83752420636132,14.6486070757918,10.9386948233332,13.088093599345,9.41170380849623,16.3930916390027,18.4493934151838,3.65100772129174,3.14268486780495,2.20256102594018,1.56478268869608,4.36050312760893,2.85592037554813,9.72149495371417,6.29938897314131,2.87505128729943,3.02008690903925,1.45072428402269,0.672187598284928,4.88792928468299,3.43840127926508,8.25075347643908,5.86717736492834,5.28990979272033,9.50747105259269,4.06613438482959,1.77858959222228,1.3498495759221,0.988866362566974,0,2.69640099466564,1.15265491596466,2.48855069540346,2.43010688997043,3.36519938162211,11.1403883917483,3.75476519617743,2.57230678351403,2.01275489138296,1.83843757322004,5.50579404996943,12.1302971180928,12.595735727012,7.78129097608144,10.2466160834699,8.33461392890816,11.725685958058,7.31591393041184,11.1542720877071,10.0173719061047,8.39992916714707,8.38797506213853,5.14938114665652,7.3304413303582,3.18850937571846,5.16254326188832,2.03991400112325,2.15881276655127,1.29955283489534,3.13618820968135,6.17955448579708,3.40860645156115,3.63700406444016,1.06001872353102,9.01397886570755,6.41632387071589,10.1922095882658,0,2.16491041011214,1.52015919285059,2.52762222507392,4.33898742932428,3.36619248741323,5.64080128446334,3.12273588179045,2.74018930480927,3.92046345335299,4.82312449768392,5.64425794251383,3.89566433121994,9.64060374164058,5.63937491987655,3.5384422077995,4.52947179852746,3.5334642953663,2.42437626567611,0,9.36898550436951,9.00620839297857,2.04365644166873,2.15667224110656,1.79970819298022,2.03312363316904,12.7322043494099,12.8100168789215,4.64921102817598,9.38651329038293,9.97290283588289,12.4672826735736,11.1946471516753,3.97173519016234,4.47865094196335,8.08712826987759,11.7847439296425,1.82168620147785,4.36813998423599,3.78130472591233,3.61691562805716,4.21826294738233,4.74020765053944,4.49768277886698,15.0047955028629,1.94011193639558,2.45837904218165,4.92663147659057,3.06874025398605,1.94633074457919,4.52727816478817,5.35033554660653,2.58744546864041,2.80885274925294,2.83082697826187,3.12579849335152,2.48550927042602,3.75241695969754,4.14142741360334,5.44512891845984,7.08351234290654,4.16521204795921,4.88321283975857,4.02410102099429,5.60473643362414,5.10135534731789,3.2833492815819,4.53985333456792,4.82459958503597,6.58650345873152,3.22095405024892,9.88362758251398,5.65975368086064,2.97376904685418,1.85115396664481,1.49301775374664,3.48355007790658,2.83508414908605,4.63872106633688,4.44756087689741,2.85338439168839,3.79623249235609,3.95277491337626,3.77002813200404,3.18330355265841,3.70431765526328,0.898819408654221,3.24207074812041,4.18196673834171,1.70701110857774,3.42745537829186,3.38123207019241,3.66572390121566,4.46090720485539,4.83937157243198,5.12215950706484,5.01874503130647,8.32093257559286,6.16985819609003,4.44678940630723,0.83422552858047,2.35870794135844,1.57403478669398,2.63718157805054,1.92941727801933,1.2731292589071,3.16465751195892,4.05338066937588,3.29473695825698,4.31304619582064,2.60498663367952,2.49630138491648,4.2938409251009,3.94674309748207,4.3419916922703,4.43407656399851,1.32643988239339,3.42226450528254,3.90413697282933,4.69380496577004,5.3602002381381,5.95109102215034,7.02481132288076,7.88175720530955,6.86540537911202,6.53764551495697,5.57135270033509,5.00786447411097,4.91806799177139,7.53956419696361,2.71952841909355,2.45882136509518,4.13905119457099,14.2890025089135,13.244920584919,4.09837363441689,4.79694761688309,4.73262329124385,2.73307121007647,4.52389135238878,4.06246956519338,4.23317480756549,4.52922449262132,4.45291771842384,4.38383786866968,2.76701444562566,8.9969968598106,3.54850213020672,4.80777129901589,5.86393053672874,6.43383479592888,5.30980553359851,1.21390318077491,2.11626489875326,2.26326095707078,2.95301892880773,5.22639751504677,4.39328098385976,2.54473610634254,3.92147116223193,1.8962205476149,3.16255825724996,6.18813259489121,8.17055053809091,3.6012218806262,2.97524972700335,4.28674070063185,3.90148514013002,3.92411398724555,4.44282355625727,4.56697423671899,6.10146440965647,8.26145076368899,5.73373834942901,2.96795255294664,4.19807509409354,4.58378229453985,3.10368094408155,2.9545361954111,4.08073171281791,12.0526446306831,2.39219233116994,4.74689796315412,3.33350149265481,1.69531611304222,1.50363650493128,2.51655990527175,2.20971958992012,2.79902904647316,3.73139929271944,5.72802370809068,2.84702394223022,3.45643094115643,3.34816556547584,5.22720740036172,4.5856138386697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| ||
|short_description=p2@Tdrd7 | |||
}} | }} |
Latest revision as of 01:05, 27 September 2015
Short description: | p2@Tdrd7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tdrd7_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 55bp_to_ENSMUST00000102929_5end |
EntrezGene: | Tdrd7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.18e-09 | 95 |
ectoderm | 1.18e-09 | 95 |
presumptive ectoderm | 1.18e-09 | 95 |
nervous system | 2.71e-09 | 75 |
structure with developmental contribution from neural crest | 5.58e-09 | 92 |
central nervous system | 8.31e-09 | 73 |
regional part of nervous system | 1.44e-08 | 54 |
neural tube | 6.94e-08 | 52 |
neural rod | 6.94e-08 | 52 |
future spinal cord | 6.94e-08 | 52 |
neural keel | 6.94e-08 | 52 |
neurectoderm | 1.01e-07 | 64 |
neural plate | 1.01e-07 | 64 |
presumptive neural plate | 1.01e-07 | 64 |
ecto-epithelium | 3.26e-07 | 73 |
anatomical conduit | 4.93e-07 | 122 |