FFCP PHASE1:Mm9::chr13:104710588..104710652,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:104710588..104710652,-
|short_description=p3@Erbb2ip
|description=CAGE_peak_3_at_Erbb2ip_5end
|association_with_transcript=0bp_to_ENSMUST00000022222,ENSMU...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59079 | |EntrezGene=59079 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=895 | |||
|TSSclassifier=NA | |||
|UniProt=E9QPY5,Q80TH2,B2RUK2,B7ZNY4,B7ZNX6,B2RUJ2 | |UniProt=E9QPY5,Q80TH2,B2RUK2,B7ZNY4,B7ZNX6,B2RUJ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000022222,ENSMUST00000053927,ENSMUST00000091269,NM_001005868,NM_021563,uc007rsk.2,uc007rsl.1,uc007rsm.1,uc007rsn.1,uc011zed.1,uc011zee.1_5end | |||
|cluster_id=chr13:104710588..104710652,- | |||
|description=CAGE_peak_3_at_Erbb2ip_5end | |||
|id=chr13:104710588..104710652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.01e-18!130;UBERON:0000925!1.01e-18!130;UBERON:0006595!1.01e-18!130;UBERON:0001007!1.06e-18!128;UBERON:0001555!1.06e-18!128;UBERON:0007026!1.06e-18!128;UBERON:0004921!5.62e-18!126;UBERON:0004185!5.62e-18!126;UBERON:0005409!4.85e-10!59;UBERON:0005911!4.35e-09!69;UBERON:0000077!2.64e-08!97;UBERON:0000160!5.47e-08!43;UBERON:0004923!1.24e-07!24;UBERON:0001041!1.26e-07!92;UBERON:0003929!1.51e-07!55;UBERON:0000344!1.62e-07!15;UBERON:0003104!2.59e-07!131;UBERON:0009142!2.59e-07!131;UBERON:0001242!5.14e-07!13;UBERON:0000060!5.14e-07!13;UBERON:0001262!5.14e-07!13;UBERON:0004786!5.14e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,9.25e-20,116;UBERON:0001555,9.25e-20,116;UBERON:0007026,9.25e-20,116;UBERON:0004119,9.47e-20,118;UBERON:0000925,9.47e-20,118;UBERON:0006595,9.47e-20,118;UBERON:0004921,4.99e-19,114;UBERON:0005409,9.09e-12,47;UBERON:0000160,3.23e-10,31;UBERON:0005911,3.23e-09,69;UBERON:0001041,2.49e-08,80;UBERON:0003929,1.14e-07,55;UBERON:0004923,1.19e-07,24;UBERON:0000344,1.55e-07,15;UBERON:0001242,4.93e-07,13;UBERON:0001262,4.93e-07,13;UBERON:0004786,4.93e-07,13;UBERON:0000077,6.79e-07,35;UBERON:0001004,8.88e-07,42 | |||
|phase1_expression=1.28119077683835,23.0323769041978,18.1999695755814,20.2651021575576,26.0465779572101,9.9048770428015,8.41005506143892,22.0800883085095,4.646027831005,3.27690336850791,1.19852577757853,1.27635454392538,24.8241058400248,20.9808965805594,4.33042690360362,6.47920855647443,2.09868563438444,17.8236123427404,20.4300506072551,15.7024171165271,2.55129870453209,11.0212955832983,6.79119451761232,8.63959083084396,5.50582274561208,14.3557991028755,12.9228598847722,11.635446565038,12.5415456841207,14.8697776558359,5.98672378769323,2.54012269383853,1.23012957516914,0,9.53210345179206,4.82080471539628,6.32925004413344,22.1821764290561,14.8453715459522,18.8468547830567,23.5292595212406,19.8083190637949,17.9638830621527,2.39203954153597,2.73717714292689,2.75320128242522,0,0.436050312760893,0.659058548203415,1.74986909166855,0.839918529752175,0,13.0870432725034,23.211588544363,27.2235977305396,1.28629718017973,0.85960031981627,1.54701627683233,0,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0.662605622854841,0.367472397644862,0.287536413054709,0,2.20231761998777,1.65993539510744,2.61131106535614,0.263772575460388,0.0914876436024097,0,0.558365998002762,1.12552522006336,2.44477196442896,1.17851434189467,0.569486723196412,0,5.98236927332154,5.66786700800891,6.37701875143691,2.58127163094416,1.3599426674155,0.539703191637817,3.89865850468601,4.92829575807069,4.21333260395256,3.40860645156115,2.07828803682295,2.12003744706204,2.39433813620357,5.13305909657271,0,0,3.89683873820185,1.52015919285059,3.53867111510348,6.73684890342454,27.4474156666002,4.45326417194474,1.56136794089522,1.82679286987285,1.61430848079241,2.41156224884196,1.76383060703557,2.01066546127481,4.44950941921873,3.47038456607788,9.73071607144862,1.94120219936891,6.40440403535141,6.30337829075789,7.45567044872489,1.75668478206928,1.46612694769419,10.7291963187608,9.70502508497954,4.19931911695385,8.13249453267614,2.99581278809645,2.28750301409313,0.376963056338593,1.04294592115366,0.511430914660661,2.90903262383384,2.27137768294861,2.54598409625791,5.349499736234,3.79084137650512,2.94618598241064,1.17108398666433,1.14951052216736,1.44049703844279,3.0140963567143,2.58538696775046,2.43416068541215,1.78033276663485,3.62184719034622,1.5089759505299,1.70195472151037,1.23165786914764,1.31517439456545,4.17070873838397,2.78601733217733,4.11564272815887,0.59710280045548,7.02213187313235,6.43369767786788,4.54661599032948,1.65700618028402,3.75241695969754,1.62055855314913,1.89395788468168,1.37734962223183,2.62254091908543,2.55787339225449,2.68273401399619,2.21854150497622,2.63295759861569,1.80584210487005,2.51313309592153,2.48539978623065,2.19550115291051,3.35516046900929,2.52347938276953,0.720332286654991,22.1380584599145,9.25576983322405,1.49301775374664,1.85789337488351,2.70621668776396,5.24377164020691,6.44896327150124,5.89699440948933,10.9141684155238,5.76446341534038,6.03204501120647,6.96347652144028,6.82374304916921,14.3811105384675,11.6714546932335,12.1476176685164,1.13800740571849,2.17072173958485,6.76246414038483,1.83286195060783,1.35766741017338,3.15611189506434,3.79419222745544,5.75679577120448,4.55296310739987,7.15703550746443,3.55743152504579,2.8363667971736,2.94838492669805,2.69834534861824,3.04290182082754,2.894125917029,3.31013607315846,5.17853047411459,4.53978634970099,3.0201755450689,2.87536413054709,3.72140947668503,2.18426371180192,3.78868316920668,5.74071723270119,6.75420929908714,12.3784637411625,2.27389694124582,2.60743962307241,2.03694102930226,3.52035372432753,4.85768146581266,4.28478553594825,7.41507861859636,4.41378403497335,3.76489972402917,5.89982644032702,7.20998584749247,6.73471429276993,6.36455857758651,1.50791283939272,2.71952841909355,12.7858710984949,7.17435540392304,2.88991061978026,3.8679856575427,2.78689407140348,2.7771801992481,3.47059041357882,1.56175497718655,1.93881057959519,3.34556317133573,2.67358408898873,3.67999490025482,0.809621403349789,2.04579100537918,3.95287777946523,1.60660658210904,3.69044221541498,0.534196811001766,0.81443479676788,4.28922319728592,2.65490276679926,1.94224508923985,2.11626489875326,4.14931175462976,2.65771703592696,3.07435147943927,4.39328098385976,2.54473610634254,2.49548164869305,4.74055136903724,2.10837217149998,4.12542172992747,2.7235168460303,2.16073312837572,0.517434735131018,1.50035924522115,1.95074257006501,2.14042581122485,1.31639216481697,0.304464949114599,3.52007562095566,2.96564899209348,4.41056796109924,4.61681508236144,6.29711264114032,3.49814964583304,3.70054266409723,6.40149509005739,11.0762717919343,2.96680483216816,8.88528580148834,2.47664241555867,3.51869602002452,5.83942216714542,5.46776910884101,6.86334519619568,4.9293744698218,7.83728133012485,5.94259887359022,4.77335309007557,0.949007980743406,4.06638934253697,3.56417624711944,4.18176592028937,5.8957892211468,5.66430254816247,7.3561575595549,7.59092231753686,10.8876577565106,18.6401793926078,0.56369293868419,1.94371509857172,0.827292452285488,3.69457257853691,0.904118764344118,0.675824501963113,3.87278887530988,2.21347454234715,2.30690557736564,3.14059357073808,1.72818003754719,24.6488674089979,2.8381530140623,4.82741498674688,6.88580361782314,11.2786818270513,15.4971456729387,16.9475583823156,16.3935375163781,23.3232499380221,17.756185950615,23.0891963963365,27.5805802493499,25.3037143514066,26.4141798930346,4.76133805591944,1.55390167361845,1.52513556236109,1.67884616364078,6.76163579112667,4.50437941082837,5.31139710375069,7.07415650960917,4.01257683228291,1.6942555278512,0.460325236507177,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,1.764384908931,1.19707462020309,0.512200817262403,2.18796045361465,0.838452650511929,1.65459157605013,2.22246727801615,3.09052585858341,2.88827288632634,2.27427490587418,3.29523089857312,2.45214243801899,2.06011316433741,3.39333307745807,2.01024141344646,3.33405583898152,3.01299247456624,2.31491064556446,0.824171801606613,2.06078488188156,1.37147700954166,3.72699192934609,2.38436189947321,2.32554266611726,2.35273451038327,2.96151127620868,2.0122077016005,2.10455769150274,2.44447404922551,2.24456908663095,1.42362021749009,2.65962102414021,3.6830793885272,2.01417893541756,1.54325288784913,0.999242311751784,2.8071793013449,3.65280791882107,2.67803664896381,3.08827986767322,2.55054619182464 | |phase1_expression=1.28119077683835,23.0323769041978,18.1999695755814,20.2651021575576,26.0465779572101,9.9048770428015,8.41005506143892,22.0800883085095,4.646027831005,3.27690336850791,1.19852577757853,1.27635454392538,24.8241058400248,20.9808965805594,4.33042690360362,6.47920855647443,2.09868563438444,17.8236123427404,20.4300506072551,15.7024171165271,2.55129870453209,11.0212955832983,6.79119451761232,8.63959083084396,5.50582274561208,14.3557991028755,12.9228598847722,11.635446565038,12.5415456841207,14.8697776558359,5.98672378769323,2.54012269383853,1.23012957516914,0,9.53210345179206,4.82080471539628,6.32925004413344,22.1821764290561,14.8453715459522,18.8468547830567,23.5292595212406,19.8083190637949,17.9638830621527,2.39203954153597,2.73717714292689,2.75320128242522,0,0.436050312760893,0.659058548203415,1.74986909166855,0.839918529752175,0,13.0870432725034,23.211588544363,27.2235977305396,1.28629718017973,0.85960031981627,1.54701627683233,0,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0.662605622854841,0.367472397644862,0.287536413054709,0,2.20231761998777,1.65993539510744,2.61131106535614,0.263772575460388,0.0914876436024097,0,0.558365998002762,1.12552522006336,2.44477196442896,1.17851434189467,0.569486723196412,0,5.98236927332154,5.66786700800891,6.37701875143691,2.58127163094416,1.3599426674155,0.539703191637817,3.89865850468601,4.92829575807069,4.21333260395256,3.40860645156115,2.07828803682295,2.12003744706204,2.39433813620357,5.13305909657271,0,0,3.89683873820185,1.52015919285059,3.53867111510348,6.73684890342454,27.4474156666002,4.45326417194474,1.56136794089522,1.82679286987285,1.61430848079241,2.41156224884196,1.76383060703557,2.01066546127481,4.44950941921873,3.47038456607788,9.73071607144862,1.94120219936891,6.40440403535141,6.30337829075789,7.45567044872489,1.75668478206928,1.46612694769419,10.7291963187608,9.70502508497954,4.19931911695385,8.13249453267614,2.99581278809645,2.28750301409313,0.376963056338593,1.04294592115366,0.511430914660661,2.90903262383384,2.27137768294861,2.54598409625791,5.349499736234,3.79084137650512,2.94618598241064,1.17108398666433,1.14951052216736,1.44049703844279,3.0140963567143,2.58538696775046,2.43416068541215,1.78033276663485,3.62184719034622,1.5089759505299,1.70195472151037,1.23165786914764,1.31517439456545,4.17070873838397,2.78601733217733,4.11564272815887,0.59710280045548,7.02213187313235,6.43369767786788,4.54661599032948,1.65700618028402,3.75241695969754,1.62055855314913,1.89395788468168,1.37734962223183,2.62254091908543,2.55787339225449,2.68273401399619,2.21854150497622,2.63295759861569,1.80584210487005,2.51313309592153,2.48539978623065,2.19550115291051,3.35516046900929,2.52347938276953,0.720332286654991,22.1380584599145,9.25576983322405,1.49301775374664,1.85789337488351,2.70621668776396,5.24377164020691,6.44896327150124,5.89699440948933,10.9141684155238,5.76446341534038,6.03204501120647,6.96347652144028,6.82374304916921,14.3811105384675,11.6714546932335,12.1476176685164,1.13800740571849,2.17072173958485,6.76246414038483,1.83286195060783,1.35766741017338,3.15611189506434,3.79419222745544,5.75679577120448,4.55296310739987,7.15703550746443,3.55743152504579,2.8363667971736,2.94838492669805,2.69834534861824,3.04290182082754,2.894125917029,3.31013607315846,5.17853047411459,4.53978634970099,3.0201755450689,2.87536413054709,3.72140947668503,2.18426371180192,3.78868316920668,5.74071723270119,6.75420929908714,12.3784637411625,2.27389694124582,2.60743962307241,2.03694102930226,3.52035372432753,4.85768146581266,4.28478553594825,7.41507861859636,4.41378403497335,3.76489972402917,5.89982644032702,7.20998584749247,6.73471429276993,6.36455857758651,1.50791283939272,2.71952841909355,12.7858710984949,7.17435540392304,2.88991061978026,3.8679856575427,2.78689407140348,2.7771801992481,3.47059041357882,1.56175497718655,1.93881057959519,3.34556317133573,2.67358408898873,3.67999490025482,0.809621403349789,2.04579100537918,3.95287777946523,1.60660658210904,3.69044221541498,0.534196811001766,0.81443479676788,4.28922319728592,2.65490276679926,1.94224508923985,2.11626489875326,4.14931175462976,2.65771703592696,3.07435147943927,4.39328098385976,2.54473610634254,2.49548164869305,4.74055136903724,2.10837217149998,4.12542172992747,2.7235168460303,2.16073312837572,0.517434735131018,1.50035924522115,1.95074257006501,2.14042581122485,1.31639216481697,0.304464949114599,3.52007562095566,2.96564899209348,4.41056796109924,4.61681508236144,6.29711264114032,3.49814964583304,3.70054266409723,6.40149509005739,11.0762717919343,2.96680483216816,8.88528580148834,2.47664241555867,3.51869602002452,5.83942216714542,5.46776910884101,6.86334519619568,4.9293744698218,7.83728133012485,5.94259887359022,4.77335309007557,0.949007980743406,4.06638934253697,3.56417624711944,4.18176592028937,5.8957892211468,5.66430254816247,7.3561575595549,7.59092231753686,10.8876577565106,18.6401793926078,0.56369293868419,1.94371509857172,0.827292452285488,3.69457257853691,0.904118764344118,0.675824501963113,3.87278887530988,2.21347454234715,2.30690557736564,3.14059357073808,1.72818003754719,24.6488674089979,2.8381530140623,4.82741498674688,6.88580361782314,11.2786818270513,15.4971456729387,16.9475583823156,16.3935375163781,23.3232499380221,17.756185950615,23.0891963963365,27.5805802493499,25.3037143514066,26.4141798930346,4.76133805591944,1.55390167361845,1.52513556236109,1.67884616364078,6.76163579112667,4.50437941082837,5.31139710375069,7.07415650960917,4.01257683228291,1.6942555278512,0.460325236507177,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,1.764384908931,1.19707462020309,0.512200817262403,2.18796045361465,0.838452650511929,1.65459157605013,2.22246727801615,3.09052585858341,2.88827288632634,2.27427490587418,3.29523089857312,2.45214243801899,2.06011316433741,3.39333307745807,2.01024141344646,3.33405583898152,3.01299247456624,2.31491064556446,0.824171801606613,2.06078488188156,1.37147700954166,3.72699192934609,2.38436189947321,2.32554266611726,2.35273451038327,2.96151127620868,2.0122077016005,2.10455769150274,2.44447404922551,2.24456908663095,1.42362021749009,2.65962102414021,3.6830793885272,2.01417893541756,1.54325288784913,0.999242311751784,2.8071793013449,3.65280791882107,2.67803664896381,3.08827986767322,2.55054619182464 | ||
|short_description=p3@Erbb2ip | |||
}} | }} |
Latest revision as of 01:41, 27 September 2015
Short description: | p3@Erbb2ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Erbb2ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:895 |
Association with transcript: | 0bp_to_ENSMUST00000022222, ENSMUST00000053927, ENSMUST00000091269, NM_001005868, NM_021563, uc007rsk.2, uc007rsl.1, uc007rsm.1, uc007rsn.1, uc011zed.1, uc011zee.1_5end |
EntrezGene: | Erbb2ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 9.25e-20 | 116 |
digestive tract | 9.25e-20 | 116 |
primitive gut | 9.25e-20 | 116 |
endoderm-derived structure | 9.47e-20 | 118 |
endoderm | 9.47e-20 | 118 |
presumptive endoderm | 9.47e-20 | 118 |
subdivision of digestive tract | 4.99e-19 | 114 |
gastrointestinal system | 9.09e-12 | 47 |
intestine | 3.23e-10 | 31 |
endo-epithelium | 3.23e-09 | 69 |
foregut | 2.49e-08 | 80 |
gut epithelium | 1.14e-07 | 55 |
organ component layer | 1.19e-07 | 24 |
mucosa | 1.55e-07 | 15 |
intestinal mucosa | 4.93e-07 | 13 |
wall of intestine | 4.93e-07 | 13 |
gastrointestinal system mucosa | 4.93e-07 | 13 |
mixed endoderm/mesoderm-derived structure | 6.79e-07 | 35 |
respiratory system | 8.88e-07 | 42 |