FFCP PHASE1:Mm9::chr11:118277114..118277138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76025 | |EntrezGene=76025 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCF1 | |UniProt=Q8VCF1 | ||
|association_with_transcript=-6bp_to_ENSMUST00000164927_5end | |association_with_transcript=-6bp_to_ENSMUST00000164927_5end | ||
|cluster_id=chr11:118277114..118277138,- | |||
|description=CAGE_peak_3_at_Cant1_5end | |description=CAGE_peak_3_at_Cant1_5end | ||
|id=chr11:118277114..118277138,- | |id=chr11:118277114..118277138,- | ||
|ontology_enrichment_celltype=CL:0002563!2.60e-09!9;CL:0002251!2.60e-09!9;CL:0002076!7.07e-08!15;CL:0000239!7.08e-07!6;CL:0000677!7.08e-07!6;CL:0000212!7.08e-07!6;CL:0000584!7.08e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.60e-09!9;CL:0002251!2.60e-09!9;CL:0002076!7.07e-08!15;CL:0000239!7.08e-07!6;CL:0000677!7.08e-07!6;CL:0000212!7.08e-07!6;CL:0000584!7.08e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.45e-15,9;CL:0002251,2.45e-15,9;CL:0002076,4.43e-12,15;CL:0000239,5.08e-11,6;CL:0000677,5.08e-11,6;CL:0000584,5.08e-11,6;CL:0000066,9.03e-11,25;CL:0000075,2.58e-09,7;CL:0000223,1.94e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.06e-18!59;UBERON:0000160!3.45e-17!43;UBERON:0000344!1.64e-15!15;UBERON:0001242!1.96e-13!13;UBERON:0000060!1.96e-13!13;UBERON:0001262!1.96e-13!13;UBERON:0004786!1.96e-13!13;UBERON:0004119!2.16e-11!130;UBERON:0000925!2.16e-11!130;UBERON:0006595!2.16e-11!130;UBERON:0001007!2.65e-11!128;UBERON:0001555!2.65e-11!128;UBERON:0007026!2.65e-11!128;UBERON:0004921!4.28e-10!126;UBERON:0004185!4.28e-10!126;UBERON:0003350!2.60e-09!9;UBERON:0004808!2.60e-09!9;UBERON:0001277!2.60e-09!9;UBERON:0004923!1.93e-08!24;UBERON:0000485!4.42e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-44,31;UBERON:0005409,2.91e-43,47;UBERON:0000344,2.22e-26,15;UBERON:0001242,1.12e-22,13;UBERON:0001262,1.12e-22,13;UBERON:0004786,1.12e-22,13;UBERON:0001007,1.73e-19,116;UBERON:0001555,1.73e-19,116;UBERON:0007026,1.73e-19,116;UBERON:0004119,5.62e-19,118;UBERON:0000925,5.62e-19,118;UBERON:0006595,5.62e-19,118;UBERON:0004921,2.84e-17,114;UBERON:0003350,2.45e-15,9;UBERON:0004808,2.45e-15,9;UBERON:0001277,2.45e-15,9;UBERON:0004923,6.63e-15,24;UBERON:0000485,3.47e-12,11;UBERON:0002108,9.65e-09,4;UBERON:0000331,3.41e-07,3;UBERON:0002116,3.41e-07,3;UBERON:0001204,3.41e-07,3;UBERON:0001168,3.41e-07,3 | |||
|phase1_expression=0,27.2200817958702,32.3049459966571,28.431635862842,36.5653882860833,32.2328202070828,33.4066076051602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.7574540585846,54.8288181750536,22.9692785646008,29.2918157388171,29.5195588779668,75.6293209436368,70.3164062030207,58.0933937916898,0,0,0,14.4425809875637,23.4390849955474,18.9877501324003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,7.4219521817389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.113408974498,0,0,59.7769509188104,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0.758168275301024,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,38.0808815995504,0,0,1.28867461322093,4.23535401709019,6.67134131534611,10.2721838100782,43.1821446005506,14.987604879885,12.3154252312132,13.131127154716,11.5028811400281,46.7386092500195,46.0374046233099,43.4127975694521,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.627994911365499,1.72756029490521,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,30.3140070095045,0,0,0,0,0,0,0,0,0,0,36.2774834845743,0,0,0.86404272657441,2.71814784818809,5.24070152990826,9.03591120778299,12.3153649030751,18.061159996898,49.9017647173403,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,9.06921534460846,0,0,0,0.19318959403219,0,0.183151624267265,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.655490552289177,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0,0.887379030796687,1.1921809497366,0.145346416632329,0.376437521661322,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0,1.07435527024149,0.382576664137687,0.441182838239031,0 | |phase1_expression=0,27.2200817958702,32.3049459966571,28.431635862842,36.5653882860833,32.2328202070828,33.4066076051602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.7574540585846,54.8288181750536,22.9692785646008,29.2918157388171,29.5195588779668,75.6293209436368,70.3164062030207,58.0933937916898,0,0,0,14.4425809875637,23.4390849955474,18.9877501324003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,7.4219521817389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.113408974498,0,0,59.7769509188104,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0.758168275301024,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6764849112016,38.0808815995504,0,0,1.28867461322093,4.23535401709019,6.67134131534611,10.2721838100782,43.1821446005506,14.987604879885,12.3154252312132,13.131127154716,11.5028811400281,46.7386092500195,46.0374046233099,43.4127975694521,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.627994911365499,1.72756029490521,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,30.3140070095045,0,0,0,0,0,0,0,0,0,0,36.2774834845743,0,0,0.86404272657441,2.71814784818809,5.24070152990826,9.03591120778299,12.3153649030751,18.061159996898,49.9017647173403,14.2908042009993,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,9.06921534460846,0,0,0,0.19318959403219,0,0.183151624267265,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.655490552289177,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0,0.887379030796687,1.1921809497366,0.145346416632329,0.376437521661322,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0,1.07435527024149,0.382576664137687,0.441182838239031,0 | ||
|short_description=p3@Cant1 | |short_description=p3@Cant1 | ||
}} | }} |
Latest revision as of 01:50, 27 September 2015
Short description: | p3@Cant1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cant1_5end |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | -6bp_to_ENSMUST00000164927_5end |
EntrezGene: | Cant1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.45e-15 | 9 |
epithelial cell of alimentary canal | 2.45e-15 | 9 |
endo-epithelial cell | 4.43e-12 | 15 |
brush border epithelial cell | 5.08e-11 | 6 |
gut absorptive cell | 5.08e-11 | 6 |
enterocyte | 5.08e-11 | 6 |
epithelial cell | 9.03e-11 | 25 |
columnar/cuboidal epithelial cell | 2.58e-09 | 7 |
endodermal cell | 1.94e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.08e-44 | 31 |
gastrointestinal system | 2.91e-43 | 47 |
mucosa | 2.22e-26 | 15 |
intestinal mucosa | 1.12e-22 | 13 |
wall of intestine | 1.12e-22 | 13 |
gastrointestinal system mucosa | 1.12e-22 | 13 |
digestive system | 1.73e-19 | 116 |
digestive tract | 1.73e-19 | 116 |
primitive gut | 1.73e-19 | 116 |
endoderm-derived structure | 5.62e-19 | 118 |
endoderm | 5.62e-19 | 118 |
presumptive endoderm | 5.62e-19 | 118 |
subdivision of digestive tract | 2.84e-17 | 114 |
epithelium of mucosa | 2.45e-15 | 9 |
gastrointestinal system epithelium | 2.45e-15 | 9 |
intestinal epithelium | 2.45e-15 | 9 |
organ component layer | 6.63e-15 | 24 |
simple columnar epithelium | 3.47e-12 | 11 |
small intestine | 9.65e-09 | 4 |
ileal mucosa | 3.41e-07 | 3 |
ileum | 3.41e-07 | 3 |
mucosa of small intestine | 3.41e-07 | 3 |
wall of small intestine | 3.41e-07 | 3 |