FFCP PHASE1:Mm9::chr18:15561204..15561233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11829 | |EntrezGene=11829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=274bp_to_uc008edr.2_5end | |association_with_transcript=274bp_to_uc008edr.2_5end | ||
|cluster_id=chr18:15561204..15561233,- | |||
|description=CAGE_peak_4_at_Aqp4_5end | |description=CAGE_peak_4_at_Aqp4_5end | ||
|id=chr18:15561204..15561233,- | |id=chr18:15561204..15561233,- | ||
|ontology_enrichment_celltype=CL:0002563!5.26e-07!9;CL:0002251!5.26e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.72e-11,15;CL:0000066,4.88e-11,25;CL:0002563,8.84e-10,9;CL:0002251,8.84e-10,9;CL:0000223,4.56e-08,20;CL:0000682,1.85e-07,3;CL:0000068,4.89e-07,3;CL:0002202,4.89e-07,3;CL:0000069,4.89e-07,3;CL:0002632,4.89e-07,3;CL:0002368,4.89e-07,3;CL:0000307,4.89e-07,3;CL:0000377,4.89e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.41e-11!43;UBERON:0005409!1.10e-10!59;UBERON:0000344!4.82e-09!15;UBERON:0001242!2.20e-07!13;UBERON:0000060!2.20e-07!13;UBERON:0001262!2.20e-07!13;UBERON:0004786!2.20e-07!13;UBERON:0003350!5.26e-07!9;UBERON:0004808!5.26e-07!9;UBERON:0001277!5.26e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-12,31;UBERON:0000344,8.61e-12,15;UBERON:0003350,8.84e-10,9;UBERON:0004808,8.84e-10,9;UBERON:0001277,8.84e-10,9;UBERON:0001242,1.36e-08,13;UBERON:0001262,1.36e-08,13;UBERON:0004786,1.36e-08,13;UBERON:0005409,8.10e-08,47;UBERON:0000485,8.64e-08,11;UBERON:0002240,1.07e-07,6;UBERON:0005174,1.07e-07,6;UBERON:0001137,1.07e-07,6;UBERON:0003126,4.89e-07,3;UBERON:0001005,4.89e-07,3;UBERON:0007196,4.89e-07,3;UBERON:0001558,4.89e-07,3;UBERON:0000489,5.01e-07,21;UBERON:0003076,7.08e-07,12;UBERON:0003057,7.08e-07,12 | |||
|phase1_expression=0,3.48975407639361,5.0049916332849,0.30246421130683,0.500895729946347,4.02910252588535,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,7.51964387129011,12.3881011776272,5.7423196411502,12.4920978886132,17.453169847557,0.760093677825496,0.252030129759931,26.8293917892919,0,0,0,2.02196133825892,1.82858109894342,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,2.68952813725088,0,0,0,1.42825492201902,1.76694832761291,0,0,0,0,1.40456071893706,1.38245879930619,0,0,0,0.558365998002762,1.12552522006336,1.83357897332172,2.06240009831567,3.27454865837937,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,6.27824018932521,4.30711771307668,4.54972000513305,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,0.898743836428936,0,0,1.39059456153821,0.511430914660661,1.45451631191692,1.29793010454206,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,1.14135375667535,0.474529061544512,2.30578536613615,1.75934646160189,1.39269530428806,2.14460495831032,0,6.91641759599022,5.97423819763102,0,0.114248512609729,0,0.814605311381257,0.775809948670503,1.1221731182451,2.08680572510049,2.50937251565324,4.39596437955849,2.83813477020141,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.952174563544055,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.943025398779491,0.295301892880773,0.922305443831782,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,1.25452977608681,0,0.674321731924103,0.247960367176008,0.785267825952089,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.859484216193193,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,3.48975407639361,5.0049916332849,0.30246421130683,0.500895729946347,4.02910252588535,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,7.51964387129011,12.3881011776272,5.7423196411502,12.4920978886132,17.453169847557,0.760093677825496,0.252030129759931,26.8293917892919,0,0,0,2.02196133825892,1.82858109894342,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,2.68952813725088,0,0,0,1.42825492201902,1.76694832761291,0,0,0,0,1.40456071893706,1.38245879930619,0,0,0,0.558365998002762,1.12552522006336,1.83357897332172,2.06240009831567,3.27454865837937,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,6.27824018932521,4.30711771307668,4.54972000513305,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,0.898743836428936,0,0,1.39059456153821,0.511430914660661,1.45451631191692,1.29793010454206,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,1.14135375667535,0.474529061544512,2.30578536613615,1.75934646160189,1.39269530428806,2.14460495831032,0,6.91641759599022,5.97423819763102,0,0.114248512609729,0,0.814605311381257,0.775809948670503,1.1221731182451,2.08680572510049,2.50937251565324,4.39596437955849,2.83813477020141,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.952174563544055,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.943025398779491,0.295301892880773,0.922305443831782,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,1.25452977608681,0,0.674321731924103,0.247960367176008,0.785267825952089,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.859484216193193,0,0.220591419119515,0.463735671240843 | ||
|short_description=p4@Aqp4 | |short_description=p4@Aqp4 | ||
}} | }} |
Latest revision as of 01:55, 27 September 2015
Short description: | p4@Aqp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Aqp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | 274bp_to_uc008edr.2_5end |
EntrezGene: | Aqp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.72e-11 | 15 |
epithelial cell | 4.88e-11 | 25 |
intestinal epithelial cell | 8.84e-10 | 9 |
epithelial cell of alimentary canal | 8.84e-10 | 9 |
endodermal cell | 4.56e-08 | 20 |
M cell of gut | 1.85e-07 | 3 |
duct epithelial cell | 4.89e-07 | 3 |
epithelial cell of tracheobronchial tree | 4.89e-07 | 3 |
branched duct epithelial cell | 4.89e-07 | 3 |
epithelial cell of lower respiratory tract | 4.89e-07 | 3 |
respiratory epithelial cell | 4.89e-07 | 3 |
tracheal epithelial cell | 4.89e-07 | 3 |
tracheoblast | 4.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.11e-12 | 31 |
mucosa | 8.61e-12 | 15 |
epithelium of mucosa | 8.84e-10 | 9 |
gastrointestinal system epithelium | 8.84e-10 | 9 |
intestinal epithelium | 8.84e-10 | 9 |
intestinal mucosa | 1.36e-08 | 13 |
wall of intestine | 1.36e-08 | 13 |
gastrointestinal system mucosa | 1.36e-08 | 13 |
gastrointestinal system | 8.10e-08 | 47 |
simple columnar epithelium | 8.64e-08 | 11 |
spinal cord | 1.07e-07 | 6 |
dorsal region element | 1.07e-07 | 6 |
dorsum | 1.07e-07 | 6 |
trachea | 4.89e-07 | 3 |
respiratory airway | 4.89e-07 | 3 |
tracheobronchial tree | 4.89e-07 | 3 |
lower respiratory tract | 4.89e-07 | 3 |
cavitated compound organ | 5.01e-07 | 21 |
posterior neural tube | 7.08e-07 | 12 |
chordal neural plate | 7.08e-07 | 12 |