FFCP PHASE1:Mm9::chr1:36748375..36748399,+: Difference between revisions
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{{FFCP|EntrezGene=100046079,12859|HGNC=|MCL_coexpression_id=79|UniProt=E9PWM0|association_with_transcript=-20bp_to_ENSMUST00000168827_5end|description=CAGE_peak_1_at_Cox5b_5end,CAGE_peak_1_at_LOC100046079_5end|id=chr1:36748375..36748399,+|ontology_enrichment_celltype=CL:0000066!2.62e-07!25;CL:0000223!3.55e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-07,25;CL:0000223,3.55e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.70e-09!15;UBERON:0001242!6.28e-08!13;UBERON:0000060!6.28e-08!13;UBERON:0001262!6.28e-08!13;UBERON:0004786!6.28e-08!13;UBERON:0007100!1.67e-07!18;UBERON:0000948!1.67e-07!18;UBERON:0005498!1.67e-07!18;UBERON:0004140!1.67e-07!18;UBERON:0009881!1.67e-07!18;UBERON:0004141!1.67e-07!18;UBERON:0003084!1.67e-07!18;UBERON:0007005!1.67e-07!18;UBERON:0004139!1.67e-07!18;UBERON:0004291!1.67e-07!18;UBERON:0000160!2.11e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.70e-09,15;UBERON:0001242,6.28e-08,13;UBERON:0001262,6.28e-08,13;UBERON:0004786,6.28e-08,13;UBERON:0000160,1.07e-07,31;UBERON:0007100,1.67e-07,18;UBERON:0000948,1.67e-07,18;UBERON:0005498,1.67e-07,18;UBERON:0004140,1.67e-07,18;UBERON:0009881,1.67e-07,18;UBERON:0004141,1.67e-07,18;UBERON:0003084,1.67e-07,18;UBERON:0007005,1.67e-07,18;UBERON:0004139,1.67e-07,18;UBERON:0004291,1.67e-07,18|phase1_expression=61.8174549824505,312.681965244868,325.779455402908,418.005540026039,410.734498556005,160.660463219679,199.505195068579,51.1328360828642,25.6235474316033,33.9393563166891,48.6259029760434,57.9943595896096,32.0145364971355,38.3775566619399,96.9349406883579,110.349020727455,94.4408535472998,55.8368032684081,56.2169177783529,64.0828374215026,115.318701444851,96.6100955184614,109.181511860075,241.268573572457,239.732698715193,355.449585787198,297.225777349762,265.676029901701,308.598033197151,272.444570270485,303.770799597767,96.5246623658639,94.1049125004392,63.3926724061755,249.567799465101,282.26642781872,265.011824428555,120.537109652229,185.957811996665,105.751796282707,101.175815941334,108.604232108393,102.442684489573,98.9548989288037,94.8888076214656,133.254942069381,238.629360026152,187.937684799945,114.676187387394,145.627994406638,154.824982317651,182.565756743514,54.3615643627066,29.7398478224651,32.2650047176765,78.4641279909638,88.5388329410758,95.3993370713268,78.4987868135239,78.8196559115329,91.905553508396,175.86031214388,158.294473707783,126.885860136677,177.007078899488,150.621784368573,115.346042549586,133.707970251901,46.3492567018895,64.8028503992115,57.6290394102787,193.385716441375,156.595795534694,62.1028352019817,59.9034193863977,101.114066527102,184.994680078973,136.497764413066,131.179979400832,72.2736856761462,67.2434180477711,63.5514312079247,226.41741219012,159.261818638965,108.945150664866,117.851434189467,114.32445968168,80.5245605965299,97.5353370131411,92.1973033302783,68.6978838222976,258.987586971397,193.791830106709,235.310591554088,273.555871745469,321.23527804879,203.503964770908,106.689381933864,133.270220361272,132.855680015888,79.9990624331545,111.644035350457,147.787039029854,319.980016418999,157.605477856164,145.175202917232,164.800969074819,189.316872574201,28.7421050848361,74.0726273933476,100.10103354406,126.962104456163,117.61390360059,119.070886036572,78.1964902452437,148.789244134336,35.3488803860155,395.190042462119,106.153266233985,118.089800461609,156.355795069959,138.674322396674,259.08454809319,95.4465398257644,88.1770635684646,190.570963185609,159.47393071738,278.954769911935,156.29637929987,140.803201040533,131.760173611764,70.6177458874298,129.151469902861,122.743419518559,149.399604038324,141.636622658152,62.6312087679445,90.8170885453679,81.3767282156433,72.391998424947,65.45058281024,71.0397502699431,59.2404407059599,61.9396801304789,48.4419873957454,59.3166524918854,66.0597158146088,92.3571033538286,63.3769899222556,46.3309896411157,44.3396832893151,76.4993106172236,47.8241268668028,58.1581118092018,62.3519873316069,75.6330213910274,279.480848550667,253.23034060088,156.574088166972,180.199422105887,204.741250363497,238.942355558767,172.586912241618,272.518460970154,296.038589630879,345.545441899106,347.414054812507,357.769009013007,339.980649921251,533.051755864822,589.7755894461,734.216336850019,669.408301522413,686.465831959302,133.323827389657,59.684675179985,226.667285126885,202.569134064275,72.0914286809091,76.6381017139447,86.8566689310909,125.043785266472,158.110789173703,162.642910326238,167.983287786757,153.99352266695,146.779761939357,149.018397558822,121.072698100974,137.519369524096,188.688517540608,160.50786624302,148.130630644357,95.2832595165138,80.0224923278871,121.172540067962,118.117064685084,100.153950803375,136.021791354277,216.986917530015,268.781822064434,288.132377757404,158.602155491625,91.4311179324195,96.1173486103563,95.341535651178,104.878682757856,94.7826237826998,135.970204851278,134.641792326979,132.788750728754,154.57807562489,43.1304619582064,136.203586846672,155.706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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100046079,12859 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=E9PWM0 | |||
|association_with_transcript=-20bp_to_ENSMUST00000168827_5end | |||
|cluster_id=chr1:36748375..36748399,+ | |||
|description=CAGE_peak_1_at_Cox5b_5end,CAGE_peak_1_at_LOC100046079_5end | |||
|id=chr1:36748375..36748399,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.62e-07!25;CL:0000223!3.55e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-07,25;CL:0000223,3.55e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.70e-09!15;UBERON:0001242!6.28e-08!13;UBERON:0000060!6.28e-08!13;UBERON:0001262!6.28e-08!13;UBERON:0004786!6.28e-08!13;UBERON:0007100!1.67e-07!18;UBERON:0000948!1.67e-07!18;UBERON:0005498!1.67e-07!18;UBERON:0004140!1.67e-07!18;UBERON:0009881!1.67e-07!18;UBERON:0004141!1.67e-07!18;UBERON:0003084!1.67e-07!18;UBERON:0007005!1.67e-07!18;UBERON:0004139!1.67e-07!18;UBERON:0004291!1.67e-07!18;UBERON:0000160!2.11e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.70e-09,15;UBERON:0001242,6.28e-08,13;UBERON:0001262,6.28e-08,13;UBERON:0004786,6.28e-08,13;UBERON:0000160,1.07e-07,31;UBERON:0007100,1.67e-07,18;UBERON:0000948,1.67e-07,18;UBERON:0005498,1.67e-07,18;UBERON:0004140,1.67e-07,18;UBERON:0009881,1.67e-07,18;UBERON:0004141,1.67e-07,18;UBERON:0003084,1.67e-07,18;UBERON:0007005,1.67e-07,18;UBERON:0004139,1.67e-07,18;UBERON:0004291,1.67e-07,18 | |||
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| |||
|short_description=p1@Cox5b,p1@LOC100046079 | |||
}} |
Latest revision as of 02:23, 27 September 2015
Short description: | p1@Cox5b, p1@LOC100046079 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cox5b_5end, CAGE_peak_1_at_LOC100046079_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | -20bp_to_ENSMUST00000168827_5end |
EntrezGene: | 100046079,12859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.62e-07 | 25 |
endodermal cell | 3.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.70e-09 | 15 |
intestinal mucosa | 6.28e-08 | 13 |
wall of intestine | 6.28e-08 | 13 |
gastrointestinal system mucosa | 6.28e-08 | 13 |
intestine | 1.07e-07 | 31 |
primary circulatory organ | 1.67e-07 | 18 |
heart | 1.67e-07 | 18 |
primitive heart tube | 1.67e-07 | 18 |
primary heart field | 1.67e-07 | 18 |
anterior lateral plate mesoderm | 1.67e-07 | 18 |
heart tube | 1.67e-07 | 18 |
heart primordium | 1.67e-07 | 18 |
cardiac mesoderm | 1.67e-07 | 18 |
cardiogenic plate | 1.67e-07 | 18 |
heart rudiment | 1.67e-07 | 18 |