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FFCP PHASE1:Mm9::chr18:23655999..23656045,+: Difference between revisions

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{{FFCP|EntrezGene=13527|HGNC=|UniProt=|association_with_transcript=16bp_to_uc008efz.1,uc008ega.1,uc008egb.1_5end|description=CAGE_peak_5_at_Dtna_5end|id=chr18:23655999..23656045,+|ontology_enrichment_celltype=CL:0000107!3.77e-07!9;CL:0000221!8.73e-07!44;CL:0000133!8.73e-07!44|ontology_enrichment_celltype_v019_2=CL:0000107,2.20e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.12e-19!75;UBERON:0001016!3.12e-19!75;UBERON:0004121!2.01e-18!102;UBERON:0000924!2.01e-18!102;UBERON:0006601!2.01e-18!102;UBERON:0001017!4.96e-18!73;UBERON:0005743!4.96e-18!73;UBERON:0000033!5.13e-18!63;UBERON:0002346!5.75e-14!71;UBERON:0003075!5.75e-14!71;UBERON:0007284!5.75e-14!71;UBERON:0003056!2.67e-13!49;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0002616!5.76e-12!49;UBERON:0001049!2.54e-11!52;UBERON:0005068!2.54e-11!52;UBERON:0006241!2.54e-11!52;UBERON:0007135!2.54e-11!52;UBERON:0003080!1.11e-09!40;UBERON:0002780!3.05e-09!39;UBERON:0001890!3.05e-09!39;UBERON:0006240!3.05e-09!39;UBERON:0000010!2.64e-08!11;UBERON:0000468!1.61e-07!333;UBERON:0007811!1.90e-07!86;UBERON:0001894!2.66e-07!10;UBERON:0006222!2.66e-07!10;UBERON:0002410!3.77e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.57e-21,95;UBERON:0000924,1.57e-21,95;UBERON:0006601,1.57e-21,95;UBERON:0001016,9.30e-20,75;UBERON:0001017,2.23e-18,73;UBERON:0002346,8.53e-17,64;UBERON:0003075,8.53e-17,64;UBERON:0007284,8.53e-17,64;UBERON:0010371,2.95e-15,73;UBERON:0003056,2.12e-13,49;UBERON:0000955,4.38e-12,47;UBERON:0006238,4.38e-12,47;UBERON:0000073,1.20e-11,54;UBERON:0002616,1.64e-11,46;UBERON:0001049,5.22e-11,52;UBERON:0005068,5.22e-11,52;UBERON:0006241,5.22e-11,52;UBERON:0007135,5.22e-11,52;UBERON:0000010,8.65e-10,11;UBERON:0003080,1.28e-09,40;UBERON:0010314,1.51e-09,92;UBERON:0002780,4.06e-09,39;UBERON:0001890,4.06e-09,39;UBERON:0006240,4.06e-09,39;UBERON:0001894,1.44e-08,10;UBERON:0006222,1.44e-08,10;UBERON:0002410,2.20e-08,9;UBERON:0000007,2.52e-07,8;UBERON:0003296,2.52e-07,8;UBERON:0010133,2.52e-07,8|phase1_expression=15.534438169165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,2.39827672018491,5.27246838562732,6.80504646759992,2.37976916763116,1.43752564364972,0,0,0,0.514518872071894,0,0,0.809265843438391,0,0,0.677689064138264,0,0,0,0,0.898800331555214,2.68952813725088,0.103689612308478,0.270011876663381,0,0.571301968807607,0.220868540951614,0.367472397644862,0.383381884072945,0.919218786610021,3.30347642998166,2.55374676170375,1.38245879930619,1.18697658957174,0.548925861614458,0,1.11673199600552,3.37657566019008,4.12555268997387,1.76777151284201,2.42031857358475,0.745597783301202,6.20954785332109,6.8014404096107,1.44932244350839,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0,16.3378366940949,1.28326477414318,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0.628332956648377,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,5.85561594023094,3.97948742945565,0.255457055208591,0,0,0,3.59497534571574,10.0650132620098,2.1361239859187,5.04090528557602,2.81287003063364,3.53239675751252,6.32740925964255,0.509196819251581,0.124406970610093,0,0.631325567659422,8.84819012146385,5.0578462975364,4.32149111532838,3.0140963567143,3.81004395247436,4.22775276940004,2.52994656311268,4.13925393182425,2.15567992932842,2.45837904218165,0.703804496655795,0.876782929710299,0.278047249225598,0,0,1.99034266818493,0,0,0,0.828503090142008,1.87620847984877,1.62055855314913,1.18372367792605,0.393528463494808,0.462801338662135,0.930135779001631,0.536546802799238,1.40118410840603,0.16455984991348,0.32833492815819,0.324275238183423,0.584799949701329,0,0.134206418760372,6.09840850835969,3.70456604565424,0,0,1.91959425481711,2.78684006232526,0.515469845288373,0.80673409849337,0.444756087689741,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.597423819763102,2.0863469104839,1.94222471436539,3.38123207019241,2.03651327845314,2.13347735884388,4.20814919341911,1.39120381673366,0.590440591918409,1.255989822731,1.35736880313981,0,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.482443521363367,2.21703828199926,1.70542270593436,1.62964976442026,1.52770577197669,2.81628297946203,2.34508760418542,2.38043640886014,2.34160377429359,1.57635144106191,3.10050565508285,1.91345722388985,2.29408640602033,1.20879487306127,2.4590339958857,0,0,0,0,3.05046120976805,3.04750385139728,2.95082901678016,0.252470927204373,5.99465616890888,7.41833614163613,6.24727853425117,9.08081432219698,12.2539270745317,9.34152551603147,11.7395103485719,7.89090816360542,9.09161889277004,4.4984984299053,1.98716119291576,0.35613120733451,1.46598263418218,2.47455184458803,0,0.971122544619926,0.302323556964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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13527
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=16bp_to_uc008efz.1,uc008ega.1,uc008egb.1_5end
|cluster_id=chr18:23655999..23656045,+
|description=CAGE_peak_5_at_Dtna_5end
|id=chr18:23655999..23656045,+
|ontology_enrichment_celltype=CL:0000107!3.77e-07!9;CL:0000221!8.73e-07!44;CL:0000133!8.73e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000107,2.20e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.12e-19!75;UBERON:0001016!3.12e-19!75;UBERON:0004121!2.01e-18!102;UBERON:0000924!2.01e-18!102;UBERON:0006601!2.01e-18!102;UBERON:0001017!4.96e-18!73;UBERON:0005743!4.96e-18!73;UBERON:0000033!5.13e-18!63;UBERON:0002346!5.75e-14!71;UBERON:0003075!5.75e-14!71;UBERON:0007284!5.75e-14!71;UBERON:0003056!2.67e-13!49;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0002616!5.76e-12!49;UBERON:0001049!2.54e-11!52;UBERON:0005068!2.54e-11!52;UBERON:0006241!2.54e-11!52;UBERON:0007135!2.54e-11!52;UBERON:0003080!1.11e-09!40;UBERON:0002780!3.05e-09!39;UBERON:0001890!3.05e-09!39;UBERON:0006240!3.05e-09!39;UBERON:0000010!2.64e-08!11;UBERON:0000468!1.61e-07!333;UBERON:0007811!1.90e-07!86;UBERON:0001894!2.66e-07!10;UBERON:0006222!2.66e-07!10;UBERON:0002410!3.77e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.57e-21,95;UBERON:0000924,1.57e-21,95;UBERON:0006601,1.57e-21,95;UBERON:0001016,9.30e-20,75;UBERON:0001017,2.23e-18,73;UBERON:0002346,8.53e-17,64;UBERON:0003075,8.53e-17,64;UBERON:0007284,8.53e-17,64;UBERON:0010371,2.95e-15,73;UBERON:0003056,2.12e-13,49;UBERON:0000955,4.38e-12,47;UBERON:0006238,4.38e-12,47;UBERON:0000073,1.20e-11,54;UBERON:0002616,1.64e-11,46;UBERON:0001049,5.22e-11,52;UBERON:0005068,5.22e-11,52;UBERON:0006241,5.22e-11,52;UBERON:0007135,5.22e-11,52;UBERON:0000010,8.65e-10,11;UBERON:0003080,1.28e-09,40;UBERON:0010314,1.51e-09,92;UBERON:0002780,4.06e-09,39;UBERON:0001890,4.06e-09,39;UBERON:0006240,4.06e-09,39;UBERON:0001894,1.44e-08,10;UBERON:0006222,1.44e-08,10;UBERON:0002410,2.20e-08,9;UBERON:0000007,2.52e-07,8;UBERON:0003296,2.52e-07,8;UBERON:0010133,2.52e-07,8
|phase1_expression=15.534438169165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,2.39827672018491,5.27246838562732,6.80504646759992,2.37976916763116,1.43752564364972,0,0,0,0.514518872071894,0,0,0.809265843438391,0,0,0.677689064138264,0,0,0,0,0.898800331555214,2.68952813725088,0.103689612308478,0.270011876663381,0,0.571301968807607,0.220868540951614,0.367472397644862,0.383381884072945,0.919218786610021,3.30347642998166,2.55374676170375,1.38245879930619,1.18697658957174,0.548925861614458,0,1.11673199600552,3.37657566019008,4.12555268997387,1.76777151284201,2.42031857358475,0.745597783301202,6.20954785332109,6.8014404096107,1.44932244350839,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0,16.3378366940949,1.28326477414318,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0.628332956648377,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,5.85561594023094,3.97948742945565,0.255457055208591,0,0,0,3.59497534571574,10.0650132620098,2.1361239859187,5.04090528557602,2.81287003063364,3.53239675751252,6.32740925964255,0.509196819251581,0.124406970610093,0,0.631325567659422,8.84819012146385,5.0578462975364,4.32149111532838,3.0140963567143,3.81004395247436,4.22775276940004,2.52994656311268,4.13925393182425,2.15567992932842,2.45837904218165,0.703804496655795,0.876782929710299,0.278047249225598,0,0,1.99034266818493,0,0,0,0.828503090142008,1.87620847984877,1.62055855314913,1.18372367792605,0.393528463494808,0.462801338662135,0.930135779001631,0.536546802799238,1.40118410840603,0.16455984991348,0.32833492815819,0.324275238183423,0.584799949701329,0,0.134206418760372,6.09840850835969,3.70456604565424,0,0,1.91959425481711,2.78684006232526,0.515469845288373,0.80673409849337,0.444756087689741,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.597423819763102,2.0863469104839,1.94222471436539,3.38123207019241,2.03651327845314,2.13347735884388,4.20814919341911,1.39120381673366,0.590440591918409,1.255989822731,1.35736880313981,0,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.482443521363367,2.21703828199926,1.70542270593436,1.62964976442026,1.52770577197669,2.81628297946203,2.34508760418542,2.38043640886014,2.34160377429359,1.57635144106191,3.10050565508285,1.91345722388985,2.29408640602033,1.20879487306127,2.4590339958857,0,0,0,0,3.05046120976805,3.04750385139728,2.95082901678016,0.252470927204373,5.99465616890888,7.41833614163613,6.24727853425117,9.08081432219698,12.2539270745317,9.34152551603147,11.7395103485719,7.89090816360542,9.09161889277004,4.4984984299053,1.98716119291576,0.35613120733451,1.46598263418218,2.47455184458803,0,0.971122544619926,0.302323556964751,1.32023555829129,1.18120757152309,0.922305443831782,2.06742634534577,1.09060118843252,1.78248689192361,0.316036757935816,1.05418608574999,3.09406629744561,25.5329704315341,9.90336017172206,7.63216234318252,8.57348140126369,9.75371285032505,6.77801506887868,6.08831376227848,3.04464949114599,2.11204537257339,0.42366414172764,2.8668691747145,0.16488625294148,1.45317984026315,0.120625849856312,0.238744688006273,0,0,2.59595422814714,0,1.03193433981611,0,0.188368457004691,0,0,0.169978429993855,0,0,0,3.16335993581135,2.03319467126849,1.18805874903981,0.418176592028937,0.218362563746178,1.21377911746339,0.909188012978695,0.785267825952089,0.129614973291793,9.94142900939081,1.12738587736838,0.897099276263873,0.66183396182839,1.55560950675238,2.19571699912143,1.520605129417,1.05621514781179,0.5208175393758,1.8874681996628,1.20792060413003,0.864090018773596,0,0.608175645870493,0.616265742988964,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,1.31377732815827,1.46521299413812,0.857473516316263,10.0314420807073,1.6942555278512,2.76195141904306,0.572895513439397,2.40594455281163,1.37016503954128,0.755393897389701,2.70009000092722,3.15224842256954,2.71885445390523,2.07104124700728,1.86817225651518,2.39414924040619,1.87806966329548,0.486213434136588,0.209613162627982,0.551530525350042,1.33348036680969,1.23621034343337,0.320919209591815,1.76888048234658,1.2673964994512,1.32038438970253,1.49826411951812,1.53660365771686,1.20614484806788,0.952587382566147,0.927074607558844,1.15745532278223,1.23625770240992,0.883193520806384,1.02860775715625,1.4198064492747,0.476872379894642,0.872078499793971,1.50575008664529,0.930760686808441,1.64635175585495,0.263069711437843,0.543216455383447,1.68342681497322,0.118635018124174,0.886540341380071,1.22769312950907,1.39443157067369,1.35034627686799,1.24905288968973,0.935726433781634,0.429742108096597,1.14772999241306,1.10295709559758,0
|short_description=p5@Dtna
}}

Latest revision as of 02:40, 27 September 2015

Short description:p5@Dtna
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Dtna_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_uc008efz.1, uc008ega.1, uc008egb.1_5end
EntrezGene:Dtna
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Dtna

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G825.53
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C77.63
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron2.20e-089

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.57e-2195
ectoderm1.57e-2195
presumptive ectoderm1.57e-2195
nervous system9.30e-2075
central nervous system2.23e-1873
neurectoderm8.53e-1764
neural plate8.53e-1764
presumptive neural plate8.53e-1764
ecto-epithelium2.95e-1573
pre-chordal neural plate2.12e-1349
brain4.38e-1247
future brain4.38e-1247
regional part of nervous system1.20e-1154
regional part of brain1.64e-1146
neural tube5.22e-1152
neural rod5.22e-1152
future spinal cord5.22e-1152
neural keel5.22e-1152
peripheral nervous system8.65e-1011
anterior neural tube1.28e-0940
structure with developmental contribution from neural crest1.51e-0992
regional part of forebrain4.06e-0939
forebrain4.06e-0939
future forebrain4.06e-0939
diencephalon1.44e-0810
future diencephalon1.44e-0810
autonomic nervous system2.20e-089
pituitary gland2.52e-078
gland of diencephalon2.52e-078
neuroendocrine gland2.52e-078
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