FFCP PHASE1:Mm9::chr13:120197792..120197810,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:120197792..120197810,- to FFCP PHASE1:Mm9::chr13:120197792..120197810,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C9V5,Q8BGK0,E9Q8F4,E9Q8F3,E9Q8F2 | |UniProt=Q8C9V5,Q8BGK0,E9Q8F4,E9Q8F3,E9Q8F2 | ||
|association_with_transcript=0bp_to_ENSMUST00000069902,ENSMUST00000099149,ENSMUST00000109204,ENSMUST00000109205,ENSMUST00000109206,ENSMUST00000133627,ENSMUST00000144599_5end | |||
|cluster_id=chr13:120197792..120197810,- | |||
|description=CAGE_peak_1_at_ENSMUST00000069902_5end,CAGE_peak_1_at_ENSMUST00000099149_5end,CAGE_peak_1_at_ENSMUST00000109204_5end,CAGE_peak_1_at_ENSMUST00000109205_5end,CAGE_peak_1_at_ENSMUST00000109206_5end,CAGE_peak_1_at_ENSMUST00000133627_5end,CAGE_peak_1_at_ENSMUST00000144599_5end | |||
|id=chr13:120197792..120197810,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.07e-11!47;UBERON:0000490!5.92e-11!66;UBERON:0007100!3.19e-10!18;UBERON:0000948!3.19e-10!18;UBERON:0005498!3.19e-10!18;UBERON:0004140!3.19e-10!18;UBERON:0009881!3.19e-10!18;UBERON:0004141!3.19e-10!18;UBERON:0003084!3.19e-10!18;UBERON:0007005!3.19e-10!18;UBERON:0004139!3.19e-10!18;UBERON:0004291!3.19e-10!18;UBERON:0004535!5.19e-10!23;UBERON:0001009!5.19e-10!23;UBERON:0003929!2.80e-09!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.07e-11,47;UBERON:0000490,5.92e-11,66;UBERON:0007100,3.19e-10,18;UBERON:0000948,3.19e-10,18;UBERON:0005498,3.19e-10,18;UBERON:0004140,3.19e-10,18;UBERON:0009881,3.19e-10,18;UBERON:0004141,3.19e-10,18;UBERON:0003084,3.19e-10,18;UBERON:0007005,3.19e-10,18;UBERON:0004139,3.19e-10,18;UBERON:0004291,3.19e-10,18;UBERON:0004535,5.19e-10,23;UBERON:0001009,5.19e-10,23;UBERON:0003929,2.80e-09,55 | |||
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|phase1_expression=7.20669811971573,18.8446720125255,18.1999695755814,26.0119221723874,29.0519523368881,19.809754085603,17.9881733258555,12.9123323441576,5.77233760821834,7.72412936862578,2.73948749160808,4.54701306273417,8.04643430676667,13.2879011676876,1.99865857089398,3.23960427823721,0,6.46697438984387,8.63820931716154,9.33657233955666,18.8796104135375,20.8510997521859,16.4555867157529,17.7591589300681,20.4174260149781,15.5042630311055,14.2151458732495,20.9007095705312,29.0735831768252,32.763916868791,11.9734475753865,0,0,0,12.7094712690561,14.2961795008303,13.4751775133164,5.85944283031671,14.8453715459522,7.85285615960697,15.8822501768374,12.294818729252,19.4204141212461,18.8845226963366,22.1001710058542,28.266199832899,8.60630478782843,15.9158364157726,10.1055644057857,18.2764105129826,18.4782076545479,11.5002051491977,7.71799987865587,8.70434570413613,6.38578218370682,7.97504251711436,12.0344044774278,10.8291139378263,4.65327859977075,4.23192783417626,5.70448263155561,10.8430250262122,22.2323699027785,11.6986963246582,12.8552627133707,7.8152812644071,4.19440154725767,4.2264013585371,12.0279950277834,9.58542162155004,11.7781978356774,3.71346279724945,4.8591079009355,9.30930074033651,9.87208351487835,12.8690630125403,5.50579404996943,4.21368215681119,4.91540906419979,5.67111037239834,5.03182039813253,6.77187381723788,3.62937898701795,5.6276261003168,5.65353516774197,5.00868595305235,2.98980529678116,3.72798891650601,4.54357159999104,7.63272757078534,6.37701875143691,12.9063581547208,31.2786813505565,31.3027851149934,14.9448576012964,16.1289679355041,43.1164369804478,13.9752864514007,16.1067322853779,7.77347063922748,10.2815696436977,12.8326477414318,7.64415719119937,21.3320010945999,3.24736561516821,1.77351905832569,4.04419556011827,36.4246576303801,11.3932668804756,10.5393918736026,4.68410382268567,6.39377504455497,10.3776973765226,12.2085338847624,12.346814249249,11.3099932196708,6.42706916109372,3.18118585223806,7.07688441559899,9.54424414689714,9.05450225687614,8.24287930329878,3.72783522436244,2.04946557908083,2.09446706813455,8.43008282188352,6.4700167233197,4.79922184794726,7.11593271609162,1.49790639404823,2.28750301409313,3.39266750704734,1.39059456153821,1.27857728665165,2.49345653471472,2.59586020908412,4.3790926455636,8.45967400148633,3.53811861807145,4.8401626853889,5.59517904739626,8.73627996847197,7.56260945182467,6.0281927134286,6.46346741937615,5.76511741281824,5.90320864726292,2.32833033665114,4.52692785158969,6.24050064553804,4.22282697993477,6.35667624039967,3.05851974148158,6.61679116392116,4.7329891373827,5.37392520409932,9.12877143507205,9.26452465612975,8.80906848126337,21.5410803436922,12.6644072389792,21.6074473753218,25.5684314432027,35.0240332510379,33.3216963836737,39.2982366628189,49.3623058575299,64.6879996714119,43.9374799268993,50.3994114722822,62.5851209694006,66.0823943162502,51.813827208688,85.7579015878776,3.36463917702604,2.77842453424068,6.93879444265976,22.4782981664013,4.47905326123991,6.50262681209228,7.34544529535932,12.3026950020239,11.5636582799333,17.1203063501303,8.54152310780121,11.6936257854048,9.0480675168097,9.35095418593409,12.4777015756237,7.19055526923377,6.91641759599022,9.95706366271836,3.98302592001472,5.36968009265725,9.01661885384643,9.57161240872977,8.72786192254316,10.8009162631091,18.4650688402831,16.2371162777562,25.11979645462,27.2707732267179,23.4197575398848,5.17219827719892,4.12773889737726,5.62155280962134,7.50582449137461,7.95884627182976,8.65727896056827,13.5217184601881,4.86405680325106,11.5315793538994,18.6898668485561,23.0727387554472,20.9065240986756,18.9434158460334,15.6075749764064,23.639732546805,5.91210208533135,6.44270800019648,6.68156403412306,5.60158783058121,5.16318546234705,8.5428191295326,5.71304738126433,4.29294025287157,5.51723004371669,4.20782910332672,5.10255259703959,4.7520361267564,4.66249451037918,4.77341893318988,6.03165135757089,11.9659250440116,3.93411418415229,3.86311444826625,2.40825884981688,2.34423373184406,9.01642199571715,4.29200576247434,8.20321370482267,11.7131623288992,8.83235930704476,14.0991590792006,10.6943363559549,10.190755108398,15.7876173653209,15.7818163272108,7.90575555893047,1.60660658210904,8.09058485687131,4.45164009168138,4.72372182125371,7.58862565673663,15.9294166007955,5.09839335925461,6.04647113929502,6.41257271170054,9.7449624650655,8.60818414242997,9.8202751403924,5.08947221268508,11.0514187299264,11.3773232856894,12.6502330289999,21.6584640821192,5.44703369206061,6.30213829109586,4.78627129996192,6.85878512101095,6.20690817747958,5.52943334566419,3.9491764944509,2.43571959291679,0.938686832254841,1.48282449604674,1.32317038832977,2.96795255294664,3.55221738730992,4.22190474497091,2.02932984805332,2.46211349617592,7.86998258900597,4.26478194624172,4.44264290074417,6.19160603889667,5.92622487583077,3.20226376907975,2.87057878214153,4.11800711771741,5.94924504978494,6.01791244991729,6.08079884739465,10.5013767981662,6.01038387804157,7.1161813494397,3.99619761040665,4.39085421630384,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| ||
|short_description=p1@ENSMUST00000069902,p1@ENSMUST00000099149,p1@ENSMUST00000109204,p1@ENSMUST00000109205,p1@ENSMUST00000109206,p1@ENSMUST00000133627,p1@ENSMUST00000144599 | |||
}} | }} |
Latest revision as of 04:05, 27 September 2015
Short description: | p1@ENSMUST00000069902, p1@ENSMUST00000099149, p1@ENSMUST00000109204, p1@ENSMUST00000109205, p1@ENSMUST00000109206, p1@ENSMUST00000133627, p1@ENSMUST00000144599 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000069902_5end, CAGE_peak_1_at_ENSMUST00000099149_5end, CAGE_peak_1_at_ENSMUST00000109204_5end, CAGE_peak_1_at_ENSMUST00000109205_5end, CAGE_peak_1_at_ENSMUST00000109206_5end, CAGE_peak_1_at_ENSMUST00000133627_5end, CAGE_peak_1_at_ENSMUST00000144599_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_ENSMUST00000069902, ENSMUST00000099149, ENSMUST00000109204, ENSMUST00000109205, ENSMUST00000109206, ENSMUST00000133627, ENSMUST00000144599_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.07e-11 | 47 |
unilaminar epithelium | 5.92e-11 | 66 |
primary circulatory organ | 3.19e-10 | 18 |
heart | 3.19e-10 | 18 |
primitive heart tube | 3.19e-10 | 18 |
primary heart field | 3.19e-10 | 18 |
anterior lateral plate mesoderm | 3.19e-10 | 18 |
heart tube | 3.19e-10 | 18 |
heart primordium | 3.19e-10 | 18 |
cardiac mesoderm | 3.19e-10 | 18 |
cardiogenic plate | 3.19e-10 | 18 |
heart rudiment | 3.19e-10 | 18 |
cardiovascular system | 5.19e-10 | 23 |
circulatory system | 5.19e-10 | 23 |
gut epithelium | 2.80e-09 | 55 |