FFCP PHASE1:Mm9::chr4:62329898..62329949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50780 | |EntrezGene=50780 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000124082_5end | |association_with_transcript=0bp_to_ENSMUST00000124082_5end | ||
|cluster_id=chr4:62329898..62329949,+ | |||
|description=CAGE_peak_5_at_Rgs3_5end | |description=CAGE_peak_5_at_Rgs3_5end | ||
|id=chr4:62329898..62329949,+ | |id=chr4:62329898..62329949,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.23e-10!9;CL:0002251!2.23e-10!9;CL:0000239!4.32e-08!6;CL:0000677!4.32e-08!6;CL:0000212!4.32e-08!6;CL:0000584!4.32e-08!6 | |ontology_enrichment_celltype=CL:0002563!2.23e-10!9;CL:0002251!2.23e-10!9;CL:0000239!4.32e-08!6;CL:0000677!4.32e-08!6;CL:0000212!4.32e-08!6;CL:0000584!4.32e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.24e-17,9;CL:0002251,4.24e-17,9;CL:0000239,4.51e-13,6;CL:0000677,4.51e-13,6;CL:0000584,4.51e-13,6;CL:0000075,4.56e-11,7;CL:0002076,1.72e-09,15;CL:0000066,2.28e-09,25;CL:0000682,3.91e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.16e-21!59;UBERON:0000160!4.95e-20!43;UBERON:0000344!1.12e-16!15;UBERON:0001242!1.15e-14!13;UBERON:0000060!1.15e-14!13;UBERON:0001262!1.15e-14!13;UBERON:0004786!1.15e-14!13;UBERON:0004119!2.55e-11!130;UBERON:0000925!2.55e-11!130;UBERON:0006595!2.55e-11!130;UBERON:0001007!3.78e-11!128;UBERON:0001555!3.78e-11!128;UBERON:0007026!3.78e-11!128;UBERON:0004923!1.48e-10!24;UBERON:0003350!2.23e-10!9;UBERON:0004808!2.23e-10!9;UBERON:0001277!2.23e-10!9;UBERON:0004921!5.66e-10!126;UBERON:0004185!5.66e-10!126;UBERON:0000485!5.57e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-49,31;UBERON:0005409,1.46e-44,47;UBERON:0000344,3.13e-28,15;UBERON:0001242,1.14e-24,13;UBERON:0001262,1.14e-24,13;UBERON:0004786,1.14e-24,13;UBERON:0003350,4.24e-17,9;UBERON:0004808,4.24e-17,9;UBERON:0001277,4.24e-17,9;UBERON:0004923,3.86e-16,24;UBERON:0001007,3.71e-15,116;UBERON:0001555,3.71e-15,116;UBERON:0007026,3.71e-15,116;UBERON:0004119,9.52e-15,118;UBERON:0000925,9.52e-15,118;UBERON:0006595,9.52e-15,118;UBERON:0000485,1.23e-13,11;UBERON:0004921,2.92e-13,114;UBERON:0002108,8.64e-09,4;UBERON:0000331,5.39e-07,3;UBERON:0002116,5.39e-07,3;UBERON:0001204,5.39e-07,3;UBERON:0001168,5.39e-07,3 | |||
|phase1_expression=0,70.8420077507903,65.9748897114827,86.2023002224466,83.1486911710936,16.1164101035414,17.2873354040689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,19.5190755807956,17.8939239232393,48.2354849856617,24.1226717849082,28.2267314818515,39.7148946663821,28.2273745331122,14.1907526819395,0,0,0,1.44425809875637,2.82598897109437,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,9.31958806090611,0,0,43.4276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,84.5872084438523,56.5924212659985,0,0,3.22168653305233,4.63872106633688,9.33987784148455,8.94060442729028,37.9623249235609,13.5053142873689,6.03204501120647,4.37704238490532,6.62877896205008,33.2563181202062,21.8299430373441,29.8711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,24.7758711135373,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0.86404272657441,1.88179466413022,2.83871332870031,0.944050424693745,1.23980183588004,1.83229159388821,2.85152941241944,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,1.2673964994512,1.13175804831646,0.468207537349412,0.704276676453562,0.689225627467359,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.564656282491984,0.423073039458382,0,0,1.22223702461276,1.12228454331548,1.06771516311757,0.492522411877817,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,70.8420077507903,65.9748897114827,86.2023002224466,83.1486911710936,16.1164101035414,17.2873354040689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,19.5190755807956,17.8939239232393,48.2354849856617,24.1226717849082,28.2267314818515,39.7148946663821,28.2273745331122,14.1907526819395,0,0,0,1.44425809875637,2.82598897109437,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,9.31958806090611,0,0,43.4276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,84.5872084438523,56.5924212659985,0,0,3.22168653305233,4.63872106633688,9.33987784148455,8.94060442729028,37.9623249235609,13.5053142873689,6.03204501120647,4.37704238490532,6.62877896205008,33.2563181202062,21.8299430373441,29.8711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,24.7758711135373,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0.86404272657441,1.88179466413022,2.83871332870031,0.944050424693745,1.23980183588004,1.83229159388821,2.85152941241944,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,1.2673964994512,1.13175804831646,0.468207537349412,0.704276676453562,0.689225627467359,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.564656282491984,0.423073039458382,0,0,1.22223702461276,1.12228454331548,1.06771516311757,0.492522411877817,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p5@Rgs3 | |short_description=p5@Rgs3 | ||
}} | }} |
Latest revision as of 04:07, 27 September 2015
Short description: | p5@Rgs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rgs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000124082_5end |
EntrezGene: | Rgs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.24e-17 | 9 |
epithelial cell of alimentary canal | 4.24e-17 | 9 |
brush border epithelial cell | 4.51e-13 | 6 |
gut absorptive cell | 4.51e-13 | 6 |
enterocyte | 4.51e-13 | 6 |
columnar/cuboidal epithelial cell | 4.56e-11 | 7 |
endo-epithelial cell | 1.72e-09 | 15 |
epithelial cell | 2.28e-09 | 25 |
M cell of gut | 3.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.70e-49 | 31 |
gastrointestinal system | 1.46e-44 | 47 |
mucosa | 3.13e-28 | 15 |
intestinal mucosa | 1.14e-24 | 13 |
wall of intestine | 1.14e-24 | 13 |
gastrointestinal system mucosa | 1.14e-24 | 13 |
epithelium of mucosa | 4.24e-17 | 9 |
gastrointestinal system epithelium | 4.24e-17 | 9 |
intestinal epithelium | 4.24e-17 | 9 |
organ component layer | 3.86e-16 | 24 |
digestive system | 3.71e-15 | 116 |
digestive tract | 3.71e-15 | 116 |
primitive gut | 3.71e-15 | 116 |
endoderm-derived structure | 9.52e-15 | 118 |
endoderm | 9.52e-15 | 118 |
presumptive endoderm | 9.52e-15 | 118 |
simple columnar epithelium | 1.23e-13 | 11 |
subdivision of digestive tract | 2.92e-13 | 114 |
small intestine | 8.64e-09 | 4 |
ileal mucosa | 5.39e-07 | 3 |
ileum | 5.39e-07 | 3 |
mucosa of small intestine | 5.39e-07 | 3 |
wall of small intestine | 5.39e-07 | 3 |