FFCP PHASE1:Mm9::chr9:78104927..78104933,+: Difference between revisions
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{{FFCP|EntrezGene=100042295|HGNC=|MCL_coexpression_id=550|UniProt=Q6P8Q0|association_with_transcript=-2bp_to_NM_001243092_5end|description=CAGE_peak_1_at_Gm3776_5end|id=chr9:78104927..78104933,+|ontology_enrichment_celltype=CL:0000066!3.01e-12!25;CL:0000223!4.39e-10!20;CL:0002563!5.03e-10!9;CL:0002251!5.03e-10!9;CL:0002076!5.39e-10!15;CL:0000239!8.12e-10!6;CL:0000677!8.12e-10!6;CL:0000212!8.12e-10!6;CL:0000584!8.12e-10!6;CL:0000075!3.05e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,5.80e-19,6;CL:0000677,5.80e-19,6;CL:0000584,5.80e-19,6;CL:0000075,3.60e-16,7;CL:0000066,8.73e-14,25;CL:0002563,1.93e-12,9;CL:0002251,1.93e-12,9;CL:0000682,1.12e-10,3;CL:0000223,3.41e-09,20;CL:0002076,3.30e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.50e-18!15;UBERON:0001242!7.10e-15!13;UBERON:0000060!7.10e-15!13;UBERON:0001262!7.10e-15!13;UBERON:0004786!7.10e-15!13;UBERON:0005409!5.83e-13!59;UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0000160!1.26e-10!43;UBERON:0004119!2.74e-10!130;UBERON:0000925!2.74e-10!130;UBERON:0006595!2.74e-10!130;UBERON:0003350!5.03e-10!9;UBERON:0004808!5.03e-10!9;UBERON:0001277!5.03e-10!9;UBERON:0004923!1.24e-09!24;UBERON:0004921!3.44e-09!126;UBERON:0004185!3.44e-09!126;UBERON:0000485!7.28e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.42e-24,15;UBERON:0001242,1.63e-18,13;UBERON:0001262,1.63e-18,13;UBERON:0004786,1.63e-18,13;UBERON:0004923,2.08e-14,24;UBERON:0003350,1.93e-12,9;UBERON:0004808,1.93e-12,9;UBERON:0001277,1.93e-12,9;UBERON:0000160,2.82e-12,31;UBERON:0005409,6.98e-12,47;UBERON:0000485,4.60e-10,11;UBERON:0001007,8.08e-10,116;UBERON:0001555,8.08e-10,116;UBERON:0007026,8.08e-10,116;UBERON:0004119,1.42e-09,118;UBERON:0000925,1.42e-09,118;UBERON:0006595,1.42e-09,118;UBERON:0001962,4.37e-08,2;UBERON:0001961,4.37e-08,2;UBERON:0001744,4.37e-08,2;UBERON:0004921,8.90e-08,114|phase1_expression=0,5.23463111459042,7.27998783023258,22.9872800593191,20.0358291978539,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9576813747824,24.5467930741872,6.31655160526522,12.4920978886132,10.1271479362368,1.33016393619462,0.252030129759931,4.8780712344167,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0,0,2.58127163094416,17.6792546764015,2.69851595818909,0,0,1.40444420131752,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,2.64450566663544,0,0,0.38660238396628,0.201683524623343,0,0.951128130562796,0,0.494096864172033,0,0.198956472041151,0,0,0.864552199498777,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,1.25578189465339,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.648032044930808,1.25452977608681,0.655087691238533,0.269728692769641,0.330613822901344,4.71160695571253,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.81384306892169,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421|short_description=p1@Gm3776}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100042295 | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P8Q0 | |||
|association_with_transcript=-2bp_to_NM_001243092_5end | |||
|cluster_id=chr9:78104927..78104933,+ | |||
|description=CAGE_peak_1_at_Gm3776_5end | |||
|id=chr9:78104927..78104933,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.01e-12!25;CL:0000223!4.39e-10!20;CL:0002563!5.03e-10!9;CL:0002251!5.03e-10!9;CL:0002076!5.39e-10!15;CL:0000239!8.12e-10!6;CL:0000677!8.12e-10!6;CL:0000212!8.12e-10!6;CL:0000584!8.12e-10!6;CL:0000075!3.05e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.80e-19,6;CL:0000677,5.80e-19,6;CL:0000584,5.80e-19,6;CL:0000075,3.60e-16,7;CL:0000066,8.73e-14,25;CL:0002563,1.93e-12,9;CL:0002251,1.93e-12,9;CL:0000682,1.12e-10,3;CL:0000223,3.41e-09,20;CL:0002076,3.30e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.50e-18!15;UBERON:0001242!7.10e-15!13;UBERON:0000060!7.10e-15!13;UBERON:0001262!7.10e-15!13;UBERON:0004786!7.10e-15!13;UBERON:0005409!5.83e-13!59;UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0000160!1.26e-10!43;UBERON:0004119!2.74e-10!130;UBERON:0000925!2.74e-10!130;UBERON:0006595!2.74e-10!130;UBERON:0003350!5.03e-10!9;UBERON:0004808!5.03e-10!9;UBERON:0001277!5.03e-10!9;UBERON:0004923!1.24e-09!24;UBERON:0004921!3.44e-09!126;UBERON:0004185!3.44e-09!126;UBERON:0000485!7.28e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.42e-24,15;UBERON:0001242,1.63e-18,13;UBERON:0001262,1.63e-18,13;UBERON:0004786,1.63e-18,13;UBERON:0004923,2.08e-14,24;UBERON:0003350,1.93e-12,9;UBERON:0004808,1.93e-12,9;UBERON:0001277,1.93e-12,9;UBERON:0000160,2.82e-12,31;UBERON:0005409,6.98e-12,47;UBERON:0000485,4.60e-10,11;UBERON:0001007,8.08e-10,116;UBERON:0001555,8.08e-10,116;UBERON:0007026,8.08e-10,116;UBERON:0004119,1.42e-09,118;UBERON:0000925,1.42e-09,118;UBERON:0006595,1.42e-09,118;UBERON:0001962,4.37e-08,2;UBERON:0001961,4.37e-08,2;UBERON:0001744,4.37e-08,2;UBERON:0004921,8.90e-08,114 | |||
|phase1_expression=0,5.23463111459042,7.27998783023258,22.9872800593191,20.0358291978539,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9576813747824,24.5467930741872,6.31655160526522,12.4920978886132,10.1271479362368,1.33016393619462,0.252030129759931,4.8780712344167,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0,0,2.58127163094416,17.6792546764015,2.69851595818909,0,0,1.40444420131752,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,2.64450566663544,0,0,0.38660238396628,0.201683524623343,0,0.951128130562796,0,0.494096864172033,0,0.198956472041151,0,0,0.864552199498777,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,1.25578189465339,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.648032044930808,1.25452977608681,0.655087691238533,0.269728692769641,0.330613822901344,4.71160695571253,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.81384306892169,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p1@Gm3776 | |||
}} |
Latest revision as of 04:16, 27 September 2015
Short description: | p1@Gm3776 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm3776_5end |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | -2bp_to_NM_001243092_5end |
EntrezGene: | Gm3776 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.80e-19 | 6 |
gut absorptive cell | 5.80e-19 | 6 |
enterocyte | 5.80e-19 | 6 |
columnar/cuboidal epithelial cell | 3.60e-16 | 7 |
epithelial cell | 8.73e-14 | 25 |
intestinal epithelial cell | 1.93e-12 | 9 |
epithelial cell of alimentary canal | 1.93e-12 | 9 |
M cell of gut | 1.12e-10 | 3 |
endodermal cell | 3.41e-09 | 20 |
endo-epithelial cell | 3.30e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.42e-24 | 15 |
intestinal mucosa | 1.63e-18 | 13 |
wall of intestine | 1.63e-18 | 13 |
gastrointestinal system mucosa | 1.63e-18 | 13 |
organ component layer | 2.08e-14 | 24 |
epithelium of mucosa | 1.93e-12 | 9 |
gastrointestinal system epithelium | 1.93e-12 | 9 |
intestinal epithelium | 1.93e-12 | 9 |
intestine | 2.82e-12 | 31 |
gastrointestinal system | 6.98e-12 | 47 |
simple columnar epithelium | 4.60e-10 | 11 |
digestive system | 8.08e-10 | 116 |
digestive tract | 8.08e-10 | 116 |
primitive gut | 8.08e-10 | 116 |
endoderm-derived structure | 1.42e-09 | 118 |
endoderm | 1.42e-09 | 118 |
presumptive endoderm | 1.42e-09 | 118 |
gut-associated lymphoid tissue | 4.37e-08 | 2 |
mucosa-associated lymphoid tissue | 4.37e-08 | 2 |
lymphoid tissue | 4.37e-08 | 2 |
subdivision of digestive tract | 8.90e-08 | 114 |