FFCP PHASE1:Mm9::chr9:7872814..7872876,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:7872814..7872876,- to FFCP PHASE1:Mm9::chr9:7872814..7872876,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11796 | |EntrezGene=11796 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2768 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000161099_5end | |||
|cluster_id=chr9:7872814..7872876,- | |||
|description=CAGE_peak_1_at_Birc3_5end | |||
|id=chr9:7872814..7872876,- | |||
|ontology_enrichment_celltype=CL:0000838!1.59e-07!12;CL:0000063!1.62e-07!66;CL:0000988!1.64e-07!32;CL:0002032!1.64e-07!32;CL:0000037!1.64e-07!32;CL:0000566!1.64e-07!32;CL:0000837!1.64e-07!32;CL:0000084!6.96e-07!11;CL:0000827!6.96e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.27e-08,12;CL:0000988,6.10e-08,32;CL:0002032,6.10e-08,32;CL:0000037,6.10e-08,32;CL:0000837,6.10e-08,32;CL:0000084,2.60e-07,11;CL:0000827,2.60e-07,11;CL:0000542,7.00e-07,13;CL:0000051,7.00e-07,13;CL:0002031,8.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-18!130;UBERON:0000925!1.06e-18!130;UBERON:0006595!1.06e-18!130;UBERON:0001007!2.75e-18!128;UBERON:0001555!2.75e-18!128;UBERON:0007026!2.75e-18!128;UBERON:0004921!3.89e-17!126;UBERON:0004185!3.89e-17!126;UBERON:0002405!1.11e-12!70;UBERON:0005911!3.01e-11!69;UBERON:0002193!5.17e-11!48;UBERON:0003929!1.09e-10!55;UBERON:0000490!1.42e-10!66;UBERON:0000077!1.86e-09!97;UBERON:0002390!2.19e-09!45;UBERON:0003061!2.19e-09!45;UBERON:0004923!5.12e-09!24;UBERON:0003104!6.87e-09!131;UBERON:0009142!6.87e-09!131;UBERON:0000926!1.29e-08!193;UBERON:0004120!1.29e-08!193;UBERON:0006603!1.29e-08!193;UBERON:0005057!1.57e-08!51;UBERON:0001041!1.74e-08!92;UBERON:0000344!1.53e-07!15;UBERON:0004177!4.00e-07!29;UBERON:0005409!8.32e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.28e-21,118;UBERON:0000925,4.28e-21,118;UBERON:0006595,4.28e-21,118;UBERON:0001007,1.16e-20,116;UBERON:0001555,1.16e-20,116;UBERON:0007026,1.16e-20,116;UBERON:0004921,2.20e-19,114;UBERON:0005911,3.85e-12,69;UBERON:0002193,1.05e-11,48;UBERON:0002405,1.05e-11,48;UBERON:0003929,1.29e-11,55;UBERON:0000490,2.68e-11,66;UBERON:0002390,5.95e-10,45;UBERON:0003061,5.95e-10,45;UBERON:0001041,1.56e-09,80;UBERON:0004923,2.23e-09,24;UBERON:0000077,5.79e-09,35;UBERON:0000160,9.59e-09,31;UBERON:0005409,2.41e-08,47;UBERON:0000344,5.08e-08,15;UBERON:0004177,1.34e-07,29;UBERON:0005057,1.34e-07,29;UBERON:0001004,3.19e-07,42;UBERON:0000065,6.66e-07,41;UBERON:0003408,7.07e-07,24;UBERON:0001242,8.97e-07,13;UBERON:0001262,8.97e-07,13;UBERON:0004786,8.97e-07,13 | |||
|phase1_expression=0.160148847104794,34.8975407639361,40.4949323056687,15.4256747766483,19.0340377379612,22.6637017081051,21.4923629347884,25.9537880117568,33.9300820385517,34.1734208430111,12.3276937122364,10.6096971463797,8.9024379564227,12.5011175459166,5.99597571268193,8.30148596298286,0.699561878128147,43.6915099021159,40.8601012145102,42.8633548316011,2.04103896362567,6.15603897445489,6.52999472847338,19.8390604263824,21.7938817013812,20.6723507081407,26.2764817657036,22.4090081993325,6.65081968097309,4.78857246543868,14.8559442139054,0.635030673459631,0.61506478758457,0,1.73310971850765,2.65975432573588,1.83752420636132,8.78916424547506,10.9386948233332,13.088093599345,15.8822501768374,10.9287277593351,10.1957174136542,1.38486499773135,0.912392380975631,2.75320128242522,0,0,0.439372365468944,0,0,0,26.6774343631801,13.7818806982155,11.7632829699862,1.02903774414379,2.86533439938757,1.54701627683233,0,0,0,0,0,1.3498495759221,1.97773272513395,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0,0,0,0.605809546665472,0.226714680320357,8.11620568364698,2.58127163094416,0.679971333707751,1.61910957491345,0,1.34408066129201,4.0728881838208,0.511290967734173,0.779358013808606,0.35333957451034,0.14084341977668,1.28326477414318,2.54805239706646,0,2.38140145112336,1.26679932737549,3.0331466700887,4.22480354960522,70.1721664683835,2.52351636410202,0,1.21786191324856,0.922461989024234,2.41156224884196,2.11659672844269,1.25666591329675,7.41584903203122,5.06097749219691,8.84610551949874,1.13236794963186,3.97514733228708,4.363877278217,5.59175283654366,0,0.41889341362691,12.517395705221,10.0644704584973,6.59893004092748,7.37007317023775,0.299581278809645,0.457500602818626,0,0,0.511430914660661,0.62336413367868,0.162241263067758,0.81471491080253,5.84712761867437,3.0326731012041,0.841767423545896,0.260240885925407,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0.351902248327898,0,0,1.0447564995665,1.4404749548556,0.199034266818493,2.1066395619397,4.11756651383544,6.53576048609863,1.24275463521301,0.234526059981096,0.36012412292203,0.946978942340841,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,0.730999937126662,1.75640092232841,2.28150911892632,0.210289948564127,0.205809224758569,22.1380584599145,9.52022039988759,0,0,1.67527699718721,1.00841762311671,3.7804267453628,2.66315876557583,11.8632265386128,1.64698954724011,3.51869292320377,3.78017296878187,2.14460495831032,7.19055526923377,8.21324589523838,9.55878111620963,0,0.342745537829186,0,0.814605311381257,0.775809948670503,1.1221731182451,1.13825766823663,1.47610147979602,2.511979645462,1.72756029490521,7.11486305009157,1.66845105716094,1.37591296579242,1.34917267430912,1.42002084971952,3.85883455603867,3.31013607315846,3.45235364940973,5.5125977103512,1.92192989231657,17.2521847832825,3.34926852901653,2.49630138491648,3.03094653536534,3.22915344339442,3.37710464954357,7.39012760666419,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,2.51259386162724,3.57065461329021,3.51240566144038,3.31033802623001,2.6575762757853,3.02964060449226,8.1931657357869,8.97961905702657,6.07526046042349,22.6186925908908,19.0366989336548,1.47529281905711,2.48343071674259,0.481651769963376,0.35163505977661,0.491804836130026,1.76729649043061,0.631016438832513,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,1.27746076687442,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,1.32023555829129,1.47650946440386,3.68922177532713,2.84271122485043,1.45413491791002,0.356497378384721,3.16036757935816,1.05418608574999,3.09406629744561,2.04263763452273,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,2.58138878870081,2.96564899209348,4.6310963591542,4.78170133530292,0.968786560175433,1.93001359770099,0.716234064018819,1.14898629821543,8.74442509889552,0.370850604021019,11.619219894254,0.619160603889667,2.22233432843654,5.08594833912666,8.61173634642459,15.7856939512501,13.2583175395207,15.954465564897,11.8851977471804,2.86401185404534,0.158167996790568,1.01659733563424,0.540026704109006,0.627264888043406,2.62035076495413,1.61837215661785,1.1571483801547,2.35580347785627,10.1099679167598,6.21339313086926,0.56369293868419,1.34564891439581,1.65458490457098,0.777804753376191,1.6790777052105,1.18269287843545,1.29092962510329,1.0416350787516,0.629156066554265,0.724752362478018,1.15212002503146,5.05617793005085,2.02725215290164,2.97861775777999,3.24802057444488,3.04345382634718,4.37098980518783,3.4856680360791,2.65841148914239,4.03865799792591,3.20068587950999,4.2346997757473,5.36018344068638,5.8689223400601,6.54510652216786,2.49403421976732,0.221985953374065,0,1.34307693091263,3.09103350451505,1.87682475451182,5.49454872801795,4.28736758158132,2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| |phase1_expression=0.160148847104794,34.8975407639361,40.4949323056687,15.4256747766483,19.0340377379612,22.6637017081051,21.4923629347884,25.9537880117568,33.9300820385517,34.1734208430111,12.3276937122364,10.6096971463797,8.9024379564227,12.5011175459166,5.99597571268193,8.30148596298286,0.699561878128147,43.6915099021159,40.8601012145102,42.8633548316011,2.04103896362567,6.15603897445489,6.52999472847338,19.8390604263824,21.7938817013812,20.6723507081407,26.2764817657036,22.4090081993325,6.65081968097309,4.78857246543868,14.8559442139054,0.635030673459631,0.61506478758457,0,1.73310971850765,2.65975432573588,1.83752420636132,8.78916424547506,10.9386948233332,13.088093599345,15.8822501768374,10.9287277593351,10.1957174136542,1.38486499773135,0.912392380975631,2.75320128242522,0,0,0.439372365468944,0,0,0,26.6774343631801,13.7818806982155,11.7632829699862,1.02903774414379,2.86533439938757,1.54701627683233,0,0,0,0,0,1.3498495759221,1.97773272513395,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0,0,0,0.605809546665472,0.226714680320357,8.11620568364698,2.58127163094416,0.679971333707751,1.61910957491345,0,1.34408066129201,4.0728881838208,0.511290967734173,0.779358013808606,0.35333957451034,0.14084341977668,1.28326477414318,2.54805239706646,0,2.38140145112336,1.26679932737549,3.0331466700887,4.22480354960522,70.1721664683835,2.52351636410202,0,1.21786191324856,0.922461989024234,2.41156224884196,2.11659672844269,1.25666591329675,7.41584903203122,5.06097749219691,8.84610551949874,1.13236794963186,3.97514733228708,4.363877278217,5.59175283654366,0,0.41889341362691,12.517395705221,10.0644704584973,6.59893004092748,7.37007317023775,0.299581278809645,0.457500602818626,0,0,0.511430914660661,0.62336413367868,0.162241263067758,0.81471491080253,5.84712761867437,3.0326731012041,0.841767423545896,0.260240885925407,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0.351902248327898,0,0,1.0447564995665,1.4404749548556,0.199034266818493,2.1066395619397,4.11756651383544,6.53576048609863,1.24275463521301,0.234526059981096,0.36012412292203,0.946978942340841,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,0.730999937126662,1.75640092232841,2.28150911892632,0.210289948564127,0.205809224758569,22.1380584599145,9.52022039988759,0,0,1.67527699718721,1.00841762311671,3.7804267453628,2.66315876557583,11.8632265386128,1.64698954724011,3.51869292320377,3.78017296878187,2.14460495831032,7.19055526923377,8.21324589523838,9.55878111620963,0,0.342745537829186,0,0.814605311381257,0.775809948670503,1.1221731182451,1.13825766823663,1.47610147979602,2.511979645462,1.72756029490521,7.11486305009157,1.66845105716094,1.37591296579242,1.34917267430912,1.42002084971952,3.85883455603867,3.31013607315846,3.45235364940973,5.5125977103512,1.92192989231657,17.2521847832825,3.34926852901653,2.49630138491648,3.03094653536534,3.22915344339442,3.37710464954357,7.39012760666419,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,2.51259386162724,3.57065461329021,3.51240566144038,3.31033802623001,2.6575762757853,3.02964060449226,8.1931657357869,8.97961905702657,6.07526046042349,22.6186925908908,19.0366989336548,1.47529281905711,2.48343071674259,0.481651769963376,0.35163505977661,0.491804836130026,1.76729649043061,0.631016438832513,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,1.27746076687442,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,1.32023555829129,1.47650946440386,3.68922177532713,2.84271122485043,1.45413491791002,0.356497378384721,3.16036757935816,1.05418608574999,3.09406629744561,2.04263763452273,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,2.58138878870081,2.96564899209348,4.6310963591542,4.78170133530292,0.968786560175433,1.93001359770099,0.716234064018819,1.14898629821543,8.74442509889552,0.370850604021019,11.619219894254,0.619160603889667,2.22233432843654,5.08594833912666,8.61173634642459,15.7856939512501,13.2583175395207,15.954465564897,11.8851977471804,2.86401185404534,0.158167996790568,1.01659733563424,0.540026704109006,0.627264888043406,2.62035076495413,1.61837215661785,1.1571483801547,2.35580347785627,10.1099679167598,6.21339313086926,0.56369293868419,1.34564891439581,1.65458490457098,0.777804753376191,1.6790777052105,1.18269287843545,1.29092962510329,1.0416350787516,0.629156066554265,0.724752362478018,1.15212002503146,5.05617793005085,2.02725215290164,2.97861775777999,3.24802057444488,3.04345382634718,4.37098980518783,3.4856680360791,2.65841148914239,4.03865799792591,3.20068587950999,4.2346997757473,5.36018344068638,5.8689223400601,6.54510652216786,2.49403421976732,0.221985953374065,0,1.34307693091263,3.09103350451505,1.87682475451182,5.49454872801795,4.28736758158132,2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| ||
|short_description=p1@Birc3 | |||
}} | }} |
Latest revision as of 04:36, 27 September 2015
Short description: | p1@Birc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Birc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2768 |
Association with transcript: | 0bp_to_ENSMUST00000161099_5end |
EntrezGene: | Birc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.27e-08 | 12 |
hematopoietic cell | 6.10e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.10e-08 | 32 |
hematopoietic stem cell | 6.10e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.10e-08 | 32 |
T cell | 2.60e-07 | 11 |
pro-T cell | 2.60e-07 | 11 |
lymphocyte | 7.00e-07 | 13 |
common lymphoid progenitor | 7.00e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 8.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.28e-21 | 118 |
endoderm | 4.28e-21 | 118 |
presumptive endoderm | 4.28e-21 | 118 |
digestive system | 1.16e-20 | 116 |
digestive tract | 1.16e-20 | 116 |
primitive gut | 1.16e-20 | 116 |
subdivision of digestive tract | 2.20e-19 | 114 |
endo-epithelium | 3.85e-12 | 69 |
hemolymphoid system | 1.05e-11 | 48 |
immune system | 1.05e-11 | 48 |
gut epithelium | 1.29e-11 | 55 |
unilaminar epithelium | 2.68e-11 | 66 |
hematopoietic system | 5.95e-10 | 45 |
blood island | 5.95e-10 | 45 |
foregut | 1.56e-09 | 80 |
organ component layer | 2.23e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 5.79e-09 | 35 |
intestine | 9.59e-09 | 31 |
gastrointestinal system | 2.41e-08 | 47 |
mucosa | 5.08e-08 | 15 |
hemopoietic organ | 1.34e-07 | 29 |
immune organ | 1.34e-07 | 29 |
respiratory system | 3.19e-07 | 42 |
respiratory tract | 6.66e-07 | 41 |
gland of gut | 7.07e-07 | 24 |
intestinal mucosa | 8.97e-07 | 13 |
wall of intestine | 8.97e-07 | 13 |
gastrointestinal system mucosa | 8.97e-07 | 13 |