FFCP PHASE1:Mm9::chr18:35713055..35713075,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:35713055..35713075,+
|short_description=p1@Mir1949,p1@Snhg4,p1@Snora74a
|description=CAGE_peak_1_at_Mir1949_5end,CAGE_peak_1_at_Snhg4_5end,CAGE_peak_1_at_S...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100503380,436583,100316700 | |EntrezGene=100503380,436583,100316700 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000166243,NR_038073,uc008eme.1,uc008emf.1_5end | |||
|cluster_id=chr18:35713055..35713075,+ | |||
|description=CAGE_peak_1_at_Mir1949_5end,CAGE_peak_1_at_Snhg4_5end,CAGE_peak_1_at_Snora74a_5end | |||
|id=chr18:35713055..35713075,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.20e-11!32;CL:0002032!2.20e-11!32;CL:0000037!2.20e-11!32;CL:0000566!2.20e-11!32;CL:0000837!2.20e-11!32;CL:0002031!1.26e-07!25;CL:0000542!3.32e-07!13;CL:0000051!3.32e-07!13;CL:0000838!5.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.20e-11,32;CL:0002032,2.20e-11,32;CL:0000037,2.20e-11,32;CL:0000837,2.20e-11,32;CL:0002031,1.26e-07,25;CL:0000542,3.32e-07,13;CL:0000051,3.32e-07,13;CL:0000838,5.01e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.76e-07!29;UBERON:0002390!9.07e-07!45;UBERON:0003061!9.07e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.76e-07,29;UBERON:0005057,1.76e-07,29;UBERON:0002390,9.07e-07,45;UBERON:0003061,9.07e-07,45 | |||
|phase1_expression=16.8156289460034,3.83872948403297,3.63999391511629,1.51232105653415,5.00895729946347,12.255186849568,19.8570744506197,22.3383349553927,95.7363310631334,99.2433591605252,158.034184672141,154.837760609948,26.7073138692681,19.7570109466934,40.6393909415109,58.3128770082699,54.5658264939954,36.2781490161973,32.3590063309544,26.3121584114779,10.3752813984305,53.8156955508798,66.0835466521506,15.6792574337539,16.9762867989706,5.7423196411502,12.9228598847722,11.8509177977239,16.1519906537918,20.1624103807945,27.4945833212578,133.991472099982,115.632180065899,79.2408405077194,67.302427402047,64.6652770444535,70.8467666230421,5.4409111995798,7.0320181007142,4.71171369576418,1.76469446409304,4.78131839470912,6.311634589405,11.4566104357775,12.3679856087808,13.0318194034794,9.38869613217647,11.5553332881637,8.5677611266444,6.22175677037707,12.3188051030319,10.062679505548,32.7176081812586,28.2891235384424,29.9123481236793,15.9500850342287,11.1748041576115,6.70373719960675,10.5204559646991,14.2827564403449,13.9442908771359,10.165335962074,3.55717918444456,6.29929802096979,7.9109309005358,4.9733608046227,9.28760342607055,4.61061966385865,14.101787273953,17.1457541681247,15.3537221786509,11.4260393761521,15.0190607847097,15.0663683034393,12.172374819316,14.7075005857603,8.8092704799511,18.2592893461818,20.7368819895929,13.9799464994005,13.7231465403614,17.7110545989298,17.0301629390842,25.8870800614573,20.4749652020926,13.258286346315,22.6370972470574,17.5215479075783,31.274917846605,16.7013147835996,11.8844440367688,6.88339101585109,10.879541339324,1.07940638327563,3.89865850468601,6.2723764193627,8.98844288843212,20.9629296771011,22.6013824004496,19.0803370235584,15.7744630149882,14.115912515575,0,7.11066703153331,22.0820861831438,14.6948721975557,17.6933555755174,9.59144589640104,15.5362730188303,11.2816025689267,17.868988656912,14.9188084372949,11.5307748628029,15.5244319769201,12.9347577849275,7.41432888845085,3.21353458054686,8.6759614151947,13.2691582792481,19.0884882937943,18.1090045137523,26.6681389224372,9.31958806090611,10.8328894894272,11.3101221679266,11.7510245395952,104.478788569162,132.578503549543,99.8771984794289,20.3715269590559,17.3850229071078,17.591609295801,19.6421481817272,21.4800984157478,20.5710164113964,22.064811777215,16.9053343991525,18.2878246796837,27.2940579108369,7.57590681191306,13.4024056251585,10.5754968039398,11.343914177737,12.9606143338715,10.6817303667585,12.0426897067759,9.7449793542118,8.2785078636485,9.26942369611222,15.8849107340968,18.4748680372146,18.1932457914887,21.1315909411454,17.0643561595862,21.4013421864261,21.4957008163973,89.1810747887808,69.7412828280878,44.8978329045036,17.8128164380532,19.2311369184499,15.3052752241863,16.0986420197943,17.9055450890137,18.9748548851475,16.0448421877781,13.6819434713806,18.6824547787471,14.9749463421267,15.1034066952768,11.5928397650574,11.2573990317506,10.5384055339704,7.91817870686193,21.2392848049769,20.1693040263397,2.97376904685418,14.2803305998314,21.9686898051291,22.5269571704625,25.7734922644187,23.5969723809311,12.008414367623,11.6037631928661,13.2868137232463,10.7054320570607,13.8234364840148,10.7436494902221,15.0122347081723,12.5834717211591,17.7233200897249,18.1218558661474,18.7771221943551,23.3066965723847,20.2873924211545,19.5505274731502,19.5892012039302,15.2194729161991,14.6076400757034,10.1851002105925,14.4438829614065,15.4246454902251,6.52195779591728,41.2107411118752,38.1324450519614,43.1735255778919,27.3861163874479,28.7000820105376,20.624693994295,18.1248566594011,27.2387180982059,16.1991233780968,5.75072826109418,7.44281895337007,7.80094182786401,4.04126204715379,5.20252499213545,4.3419916922703,7.944387177164,24.0654092948516,20.8595169845793,19.860175035697,12.2038929110021,10.7204004762762,5.2369600994923,8.19561321002755,10.2462843669024,10.85176979279,6.218735977642,8.68475567993411,7.59813920209941,5.06271705035291,6.03165135757089,9.79030230873677,12.7858710984949,31.7327258250442,18.1422166686205,17.4645413022383,18.0328439914343,13.6334300690361,15.7754109708128,16.0079885161622,13.5716740571663,15.0550342710108,14.4819138153556,13.0215204162863,12.1443210502468,15.1973046113882,12.6492088942888,19.2792789853084,17.7425106510336,12.9987890677096,20.1979829598434,18.9715641418416,2.65490276679926,14.8096188054539,27.2091201268276,16.597247018519,10.6308681437078,15.6791925451403,13.6966995379157,18.5402202033528,18.8943610543902,25.9150141507369,5.27093042874994,10.3135543248187,38.469675450178,11.7039711120352,7.24408629183425,8.14480733120051,12.945837055886,9.0968096977056,9.87294123612726,4.56697423671899,12.9069439435041,3.81297727554876,14.9959310677374,16.9832840529724,18.4069446433332,22.9792243976274,22.0838836405802,21.6665987663481,13.9910801582328,14.2777482548092,20.3336348149445,21.2578474002119,33.5202094539178,35.4132699168819,32.9433088807671,31.3426097292936,59.8324073578371,62.5582991886751,55.8327894169872,19.0934123603023,25.3068794864908,18.2987520414164,24.625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| |phase1_expression=16.8156289460034,3.83872948403297,3.63999391511629,1.51232105653415,5.00895729946347,12.255186849568,19.8570744506197,22.3383349553927,95.7363310631334,99.2433591605252,158.034184672141,154.837760609948,26.7073138692681,19.7570109466934,40.6393909415109,58.3128770082699,54.5658264939954,36.2781490161973,32.3590063309544,26.3121584114779,10.3752813984305,53.8156955508798,66.0835466521506,15.6792574337539,16.9762867989706,5.7423196411502,12.9228598847722,11.8509177977239,16.1519906537918,20.1624103807945,27.4945833212578,133.991472099982,115.632180065899,79.2408405077194,67.302427402047,64.6652770444535,70.8467666230421,5.4409111995798,7.0320181007142,4.71171369576418,1.76469446409304,4.78131839470912,6.311634589405,11.4566104357775,12.3679856087808,13.0318194034794,9.38869613217647,11.5553332881637,8.5677611266444,6.22175677037707,12.3188051030319,10.062679505548,32.7176081812586,28.2891235384424,29.9123481236793,15.9500850342287,11.1748041576115,6.70373719960675,10.5204559646991,14.2827564403449,13.9442908771359,10.165335962074,3.55717918444456,6.29929802096979,7.9109309005358,4.9733608046227,9.28760342607055,4.61061966385865,14.101787273953,17.1457541681247,15.3537221786509,11.4260393761521,15.0190607847097,15.0663683034393,12.172374819316,14.7075005857603,8.8092704799511,18.2592893461818,20.7368819895929,13.9799464994005,13.7231465403614,17.7110545989298,17.0301629390842,25.8870800614573,20.4749652020926,13.258286346315,22.6370972470574,17.5215479075783,31.274917846605,16.7013147835996,11.8844440367688,6.88339101585109,10.879541339324,1.07940638327563,3.89865850468601,6.2723764193627,8.98844288843212,20.9629296771011,22.6013824004496,19.0803370235584,15.7744630149882,14.115912515575,0,7.11066703153331,22.0820861831438,14.6948721975557,17.6933555755174,9.59144589640104,15.5362730188303,11.2816025689267,17.868988656912,14.9188084372949,11.5307748628029,15.5244319769201,12.9347577849275,7.41432888845085,3.21353458054686,8.6759614151947,13.2691582792481,19.0884882937943,18.1090045137523,26.6681389224372,9.31958806090611,10.8328894894272,11.3101221679266,11.7510245395952,104.478788569162,132.578503549543,99.8771984794289,20.3715269590559,17.3850229071078,17.591609295801,19.6421481817272,21.4800984157478,20.5710164113964,22.064811777215,16.9053343991525,18.2878246796837,27.2940579108369,7.57590681191306,13.4024056251585,10.5754968039398,11.343914177737,12.9606143338715,10.6817303667585,12.0426897067759,9.7449793542118,8.2785078636485,9.26942369611222,15.8849107340968,18.4748680372146,18.1932457914887,21.1315909411454,17.0643561595862,21.4013421864261,21.4957008163973,89.1810747887808,69.7412828280878,44.8978329045036,17.8128164380532,19.2311369184499,15.3052752241863,16.0986420197943,17.9055450890137,18.9748548851475,16.0448421877781,13.6819434713806,18.6824547787471,14.9749463421267,15.1034066952768,11.5928397650574,11.2573990317506,10.5384055339704,7.91817870686193,21.2392848049769,20.1693040263397,2.97376904685418,14.2803305998314,21.9686898051291,22.5269571704625,25.7734922644187,23.5969723809311,12.008414367623,11.6037631928661,13.2868137232463,10.7054320570607,13.8234364840148,10.7436494902221,15.0122347081723,12.5834717211591,17.7233200897249,18.1218558661474,18.7771221943551,23.3066965723847,20.2873924211545,19.5505274731502,19.5892012039302,15.2194729161991,14.6076400757034,10.1851002105925,14.4438829614065,15.4246454902251,6.52195779591728,41.2107411118752,38.1324450519614,43.1735255778919,27.3861163874479,28.7000820105376,20.624693994295,18.1248566594011,27.2387180982059,16.1991233780968,5.75072826109418,7.44281895337007,7.80094182786401,4.04126204715379,5.20252499213545,4.3419916922703,7.944387177164,24.0654092948516,20.8595169845793,19.860175035697,12.2038929110021,10.7204004762762,5.2369600994923,8.19561321002755,10.2462843669024,10.85176979279,6.218735977642,8.68475567993411,7.59813920209941,5.06271705035291,6.03165135757089,9.79030230873677,12.7858710984949,31.7327258250442,18.1422166686205,17.4645413022383,18.0328439914343,13.6334300690361,15.7754109708128,16.0079885161622,13.5716740571663,15.0550342710108,14.4819138153556,13.0215204162863,12.1443210502468,15.1973046113882,12.6492088942888,19.2792789853084,17.7425106510336,12.9987890677096,20.1979829598434,18.9715641418416,2.65490276679926,14.8096188054539,27.2091201268276,16.597247018519,10.6308681437078,15.6791925451403,13.6966995379157,18.5402202033528,18.8943610543902,25.9150141507369,5.27093042874994,10.3135543248187,38.469675450178,11.7039711120352,7.24408629183425,8.14480733120051,12.945837055886,9.0968096977056,9.87294123612726,4.56697423671899,12.9069439435041,3.81297727554876,14.9959310677374,16.9832840529724,18.4069446433332,22.9792243976274,22.0838836405802,21.6665987663481,13.9910801582328,14.2777482548092,20.3336348149445,21.2578474002119,33.5202094539178,35.4132699168819,32.9433088807671,31.3426097292936,59.8324073578371,62.5582991886751,55.8327894169872,19.0934123603023,25.3068794864908,18.2987520414164,24.625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| ||
|short_description=p1@Mir1949,p1@Snhg4,p1@Snora74a | |||
}} | }} |
Latest revision as of 04:42, 27 September 2015
Short description: | p1@Mir1949, p1@Snhg4, p1@Snora74a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir1949_5end, CAGE_peak_1_at_Snhg4_5end, CAGE_peak_1_at_Snora74a_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000166243, NR_038073, uc008eme.1, uc008emf.1_5end |
EntrezGene: | 100503380,436583,100316700 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.20e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.20e-11 | 32 |
hematopoietic stem cell | 2.20e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.20e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.26e-07 | 25 |
lymphocyte | 3.32e-07 | 13 |
common lymphoid progenitor | 3.32e-07 | 13 |
lymphoid lineage restricted progenitor cell | 5.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.76e-07 | 29 |
immune organ | 1.76e-07 | 29 |
hematopoietic system | 9.07e-07 | 45 |
blood island | 9.07e-07 | 45 |