FFCP PHASE1:Mm9::chr1:53842008..53842033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=98267 | |EntrezGene=98267 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1272 | |MCL_coexpression_id=1272 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BG48 | |UniProt=Q8BG48 | ||
|association_with_transcript=25bp_to_NM_133810,uc007azj.2_5end | |association_with_transcript=25bp_to_NM_133810,uc007azj.2_5end | ||
|cluster_id=chr1:53842008..53842033,- | |||
|description=CAGE_peak_1_at_Stk17b_5end | |description=CAGE_peak_1_at_Stk17b_5end | ||
|id=chr1:53842008..53842033,- | |id=chr1:53842008..53842033,- | ||
|ontology_enrichment_celltype=CL:0000063!2.83e-09!66;CL:0000988!1.03e-08!32;CL:0002032!1.03e-08!32;CL:0000037!1.03e-08!32;CL:0000566!1.03e-08!32;CL:0000837!1.03e-08!32;CL:0000838!7.25e-08!12;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0002031!3.67e-07!25 | |ontology_enrichment_celltype=CL:0000063!2.83e-09!66;CL:0000988!1.03e-08!32;CL:0002032!1.03e-08!32;CL:0000037!1.03e-08!32;CL:0000566!1.03e-08!32;CL:0000837!1.03e-08!32;CL:0000838!7.25e-08!12;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0002031!3.67e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.01e-08,32;CL:0002032,1.01e-08,32;CL:0000037,1.01e-08,32;CL:0000837,1.01e-08,32;CL:0000838,7.25e-08,12;CL:0000084,3.57e-07,11;CL:0000827,3.57e-07,11;CL:0002031,3.61e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.43e-13!48;UBERON:0002390!1.12e-11!45;UBERON:0003061!1.12e-11!45;UBERON:0002405!1.97e-10!70;UBERON:0004119!9.69e-10!130;UBERON:0000925!9.69e-10!130;UBERON:0006595!9.69e-10!130;UBERON:0001007!1.50e-09!128;UBERON:0001555!1.50e-09!128;UBERON:0007026!1.50e-09!128;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0004923!2.16e-08!24;UBERON:0004177!2.65e-08!29;UBERON:0003081!6.51e-08!88;UBERON:0000344!2.71e-07!15;UBERON:0003929!9.40e-07!55 | |ontology_enrichment_uberon=UBERON:0002193!2.43e-13!48;UBERON:0002390!1.12e-11!45;UBERON:0003061!1.12e-11!45;UBERON:0002405!1.97e-10!70;UBERON:0004119!9.69e-10!130;UBERON:0000925!9.69e-10!130;UBERON:0006595!9.69e-10!130;UBERON:0001007!1.50e-09!128;UBERON:0001555!1.50e-09!128;UBERON:0007026!1.50e-09!128;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0004923!2.16e-08!24;UBERON:0004177!2.65e-08!29;UBERON:0003081!6.51e-08!88;UBERON:0000344!2.71e-07!15;UBERON:0003929!9.40e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.43e-13,48;UBERON:0002405,2.43e-13,48;UBERON:0002390,1.12e-11,45;UBERON:0003061,1.12e-11,45;UBERON:0004119,1.26e-11,118;UBERON:0000925,1.26e-11,118;UBERON:0006595,1.26e-11,118;UBERON:0001007,1.96e-11,116;UBERON:0001555,1.96e-11,116;UBERON:0007026,1.96e-11,116;UBERON:0004921,1.52e-10,114;UBERON:0000077,9.97e-09,35;UBERON:0004923,2.16e-08,24;UBERON:0004177,2.65e-08,29;UBERON:0005057,2.65e-08,29;UBERON:0003081,1.66e-07,87;UBERON:0000344,2.71e-07,15;UBERON:0003929,9.40e-07,55 | |||
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| ||
|short_description=p1@Stk17b | |short_description=p1@Stk17b | ||
}} | }} |
Latest revision as of 05:23, 27 September 2015
Short description: | p1@Stk17b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stk17b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1272 |
Association with transcript: | 25bp_to_NM_133810, uc007azj.2_5end |
EntrezGene: | Stk17b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.01e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.01e-08 | 32 |
hematopoietic stem cell | 1.01e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.01e-08 | 32 |
lymphoid lineage restricted progenitor cell | 7.25e-08 | 12 |
T cell | 3.57e-07 | 11 |
pro-T cell | 3.57e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 3.61e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.43e-13 | 48 |
immune system | 2.43e-13 | 48 |
hematopoietic system | 1.12e-11 | 45 |
blood island | 1.12e-11 | 45 |
endoderm-derived structure | 1.26e-11 | 118 |
endoderm | 1.26e-11 | 118 |
presumptive endoderm | 1.26e-11 | 118 |
digestive system | 1.96e-11 | 116 |
digestive tract | 1.96e-11 | 116 |
primitive gut | 1.96e-11 | 116 |
subdivision of digestive tract | 1.52e-10 | 114 |
mixed endoderm/mesoderm-derived structure | 9.97e-09 | 35 |
organ component layer | 2.16e-08 | 24 |
hemopoietic organ | 2.65e-08 | 29 |
immune organ | 2.65e-08 | 29 |
lateral plate mesoderm | 1.66e-07 | 87 |
mucosa | 2.71e-07 | 15 |
gut epithelium | 9.40e-07 | 55 |