FFCP PHASE1:Mm9::chr7:96781461..96781503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:96781461..96781503,+
|short_description=p5@Me3
|description=CAGE_peak_5_at_Me3_5end
|association_with_transcript=65bp_to_ENSMUST00000159167_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109264 | |EntrezGene=109264 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=841 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENSMUST00000159167_5end | |||
|cluster_id=chr7:96781461..96781503,+ | |||
|description=CAGE_peak_5_at_Me3_5end | |||
|id=chr7:96781461..96781503,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.54e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.32e-11!63;UBERON:0003103!1.01e-10!43;UBERON:0001049!1.09e-10!52;UBERON:0005068!1.09e-10!52;UBERON:0006241!1.09e-10!52;UBERON:0007135!1.09e-10!52;UBERON:0001017!1.41e-10!73;UBERON:0005743!1.41e-10!73;UBERON:0004121!3.38e-10!102;UBERON:0000924!3.38e-10!102;UBERON:0006601!3.38e-10!102;UBERON:0000073!6.23e-10!75;UBERON:0001016!6.23e-10!75;UBERON:0002346!8.84e-10!71;UBERON:0003075!8.84e-10!71;UBERON:0007284!8.84e-10!71;UBERON:0000955!9.88e-10!50;UBERON:0006238!9.88e-10!50;UBERON:0002616!3.04e-09!49;UBERON:0004111!2.81e-08!122;UBERON:0000025!8.17e-08!114;UBERON:0003076!1.06e-07!12;UBERON:0003057!1.06e-07!12;UBERON:0000489!2.47e-07!21;UBERON:0004535!3.12e-07!23;UBERON:0001009!3.12e-07!23;UBERON:0002020!4.07e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.95e-13,73;UBERON:0000073,7.57e-13,54;UBERON:0010314,1.16e-12,92;UBERON:0001016,3.45e-12,75;UBERON:0001049,6.45e-12,52;UBERON:0005068,6.45e-12,52;UBERON:0006241,6.45e-12,52;UBERON:0007135,6.45e-12,52;UBERON:0004121,1.37e-11,95;UBERON:0000924,1.37e-11,95;UBERON:0006601,1.37e-11,95;UBERON:0003103,2.68e-11,43;UBERON:0003076,7.44e-11,12;UBERON:0003057,7.44e-11,12;UBERON:0002346,1.35e-10,64;UBERON:0003075,1.35e-10,64;UBERON:0007284,1.35e-10,64;UBERON:0000955,4.74e-09,47;UBERON:0006238,4.74e-09,47;UBERON:0010371,1.50e-08,73;UBERON:0002616,1.98e-08,46;UBERON:0000489,2.18e-08,21;UBERON:0002020,5.42e-08,34;UBERON:0000025,2.27e-07,114;UBERON:0004111,2.84e-07,122 | |||
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| ||
|short_description=p5@Me3 | |||
}} | }} |
Latest revision as of 05:24, 27 September 2015
Short description: | p5@Me3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Me3_5end |
Coexpression cluster: | MCL_coexpression_mm9:841 |
Association with transcript: | 65bp_to_ENSMUST00000159167_5end |
EntrezGene: | Me3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.54e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.95e-13 | 73 |
regional part of nervous system | 7.57e-13 | 54 |
structure with developmental contribution from neural crest | 1.16e-12 | 92 |
nervous system | 3.45e-12 | 75 |
neural tube | 6.45e-12 | 52 |
neural rod | 6.45e-12 | 52 |
future spinal cord | 6.45e-12 | 52 |
neural keel | 6.45e-12 | 52 |
ectoderm-derived structure | 1.37e-11 | 95 |
ectoderm | 1.37e-11 | 95 |
presumptive ectoderm | 1.37e-11 | 95 |
compound organ | 2.68e-11 | 43 |
posterior neural tube | 7.44e-11 | 12 |
chordal neural plate | 7.44e-11 | 12 |
neurectoderm | 1.35e-10 | 64 |
neural plate | 1.35e-10 | 64 |
presumptive neural plate | 1.35e-10 | 64 |
brain | 4.74e-09 | 47 |
future brain | 4.74e-09 | 47 |
ecto-epithelium | 1.50e-08 | 73 |
regional part of brain | 1.98e-08 | 46 |
cavitated compound organ | 2.18e-08 | 21 |
gray matter | 5.42e-08 | 34 |
tube | 2.27e-07 | 114 |
anatomical conduit | 2.84e-07 | 122 |