FFCP PHASE1:Mm9::chr9:85736331..85736368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21983 | |EntrezGene=21983 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0L0 | |UniProt=Q9Z0L0 | ||
|association_with_transcript=-90bp_to_ENSMUST00000098500,NM_001164792,uc009qxa.2_5end | |association_with_transcript=-90bp_to_ENSMUST00000098500,NM_001164792,uc009qxa.2_5end | ||
|cluster_id=chr9:85736331..85736368,+ | |||
|description=CAGE_peak_6_at_Tpbg_5end | |description=CAGE_peak_6_at_Tpbg_5end | ||
|id=chr9:85736331..85736368,+ | |id=chr9:85736331..85736368,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.87e-16!44;CL:0000133!3.87e-16!44;CL:0000055!4.55e-16!50;CL:0000117!5.02e-16!23;CL:0000337!5.02e-16!23;CL:0002319!2.49e-15!43;CL:0002321!7.62e-13!70;CL:0000220!7.62e-13!70;CL:0000393!4.26e-12!39;CL:0000211!4.26e-12!39;CL:0000540!7.74e-11!33;CL:0000047!7.74e-11!33;CL:0000031!7.74e-11!33;CL:0000404!7.74e-11!33;CL:0000144!1.39e-08!121;CL:0000012!1.39e-08!121;CL:0000548!1.45e-07!115;CL:0000004!1.45e-07!115;CL:0000255!1.45e-07!115;CL:0002371!5.17e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.97e-12,2;CL:0002604,2.97e-12,2;CL:0002611,3.38e-12,2;CL:0002453,2.51e-11,8;CL:0002319,2.35e-09,43;CL:0000221,4.06e-09,44;CL:0000133,4.06e-09,44;CL:0000333,4.22e-09,10;CL:0000095,4.22e-09,10;CL:0000243,4.22e-09,10;CL:0000123,4.22e-09,10;CL:0000125,4.22e-09,10;CL:0000030,4.22e-09,10;CL:0000339,4.22e-09,10;CL:0000128,5.12e-09,6;CL:0000126,5.12e-09,6;CL:0000127,5.12e-09,6;CL:0002612,3.05e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.67e-19!75;UBERON:0001016!3.67e-19!75;UBERON:0001017!3.97e-18!73;UBERON:0005743!3.97e-18!73;UBERON:0001049!2.22e-17!52;UBERON:0005068!2.22e-17!52;UBERON:0006241!2.22e-17!52;UBERON:0007135!2.22e-17!52;UBERON:0000955!3.43e-14!50;UBERON:0006238!3.43e-14!50;UBERON:0002020!4.75e-14!34;UBERON:0002616!1.29e-13!49;UBERON:0004121!1.97e-12!102;UBERON:0000924!1.97e-12!102;UBERON:0006601!1.97e-12!102;UBERON:0003080!1.71e-11!40;UBERON:0002780!6.93e-11!39;UBERON:0001890!6.93e-11!39;UBERON:0006240!6.93e-11!39;UBERON:0002346!4.60e-10!71;UBERON:0003075!4.60e-10!71;UBERON:0007284!4.60e-10!71;UBERON:0002791!7.19e-10!29;UBERON:0003528!7.19e-10!29;UBERON:0001893!7.19e-10!29;UBERON:0000033!7.92e-10!63;UBERON:0003056!9.72e-08!49;UBERON:0007811!1.10e-07!86;UBERON:0003076!5.03e-07!12;UBERON:0003057!5.03e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.22e-18,5;UBERON:0002315,5.22e-18,5;UBERON:0002240,4.69e-15,6;UBERON:0005174,4.69e-15,6;UBERON:0001137,4.69e-15,6;UBERON:0002256,3.38e-12,2;UBERON:0003076,1.61e-11,12;UBERON:0003057,1.61e-11,12;UBERON:0002020,1.53e-09,34;UBERON:0002257,3.05e-08,3;UBERON:0001049,1.56e-07,52;UBERON:0005068,1.56e-07,52;UBERON:0006241,1.56e-07,52;UBERON:0007135,1.56e-07,52;UBERON:0000073,3.26e-07,54 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,1.56478268869608,0.872100625521786,1.5378032791413,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,1.42825492201902,2.87129103237098,0.122490799214954,0.383381884072945,0.919218786610021,0,0.638436690425939,0.307213066512487,1.45074916503213,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0.589257170947335,1.28134512719193,1.67759501242771,0.454357159999104,0.151143120213571,0,0,0,0,0,0,0,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.7972268675888,0.599902730993408,1.01656181658452,0.449371918214468,0,0.376963056338593,0.173824320192276,0.511430914660661,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,1.3114795630134,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,11.8984900995699,12.8755336137765,16.5839968565309,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,1.03552062350364,0,0.798049746802062,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,1.56478268869608,0.872100625521786,1.5378032791413,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,1.42825492201902,2.87129103237098,0.122490799214954,0.383381884072945,0.919218786610021,0,0.638436690425939,0.307213066512487,1.45074916503213,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0.589257170947335,1.28134512719193,1.67759501242771,0.454357159999104,0.151143120213571,0,0,0,0,0,0,0,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.7972268675888,0.599902730993408,1.01656181658452,0.449371918214468,0,0.376963056338593,0.173824320192276,0.511430914660661,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,1.3114795630134,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,11.8984900995699,12.8755336137765,16.5839968565309,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,1.03552062350364,0,0.798049746802062,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p6@Tpbg | |short_description=p6@Tpbg | ||
}} | }} |
Latest revision as of 05:29, 27 September 2015
Short description: | p6@Tpbg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tpbg_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | -90bp_to_ENSMUST00000098500, NM_001164792, uc009qxa.2_5end |
EntrezGene: | Tpbg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.97e-12 | 2 |
astrocyte of the hippocampus | 2.97e-12 | 2 |
neuron of the dorsal spinal cord | 3.38e-12 | 2 |
oligodendrocyte precursor cell | 2.51e-11 | 8 |
neural cell | 2.35e-09 | 43 |
ectodermal cell | 4.06e-09 | 44 |
neurectodermal cell | 4.06e-09 | 44 |
migratory neural crest cell | 4.22e-09 | 10 |
neuron associated cell | 4.22e-09 | 10 |
glial cell (sensu Vertebrata) | 4.22e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 4.22e-09 | 10 |
glial cell | 4.22e-09 | 10 |
glioblast | 4.22e-09 | 10 |
glioblast (sensu Vertebrata) | 4.22e-09 | 10 |
oligodendrocyte | 5.12e-09 | 6 |
macroglial cell | 5.12e-09 | 6 |
astrocyte | 5.12e-09 | 6 |
neuron of the ventral spinal cord | 3.05e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.22e-18 | 5 |
gray matter of spinal cord | 5.22e-18 | 5 |
spinal cord | 4.69e-15 | 6 |
dorsal region element | 4.69e-15 | 6 |
dorsum | 4.69e-15 | 6 |
dorsal horn of spinal cord | 3.38e-12 | 2 |
posterior neural tube | 1.61e-11 | 12 |
chordal neural plate | 1.61e-11 | 12 |
gray matter | 1.53e-09 | 34 |
ventral horn of spinal cord | 3.05e-08 | 3 |
neural tube | 1.56e-07 | 52 |
neural rod | 1.56e-07 | 52 |
future spinal cord | 1.56e-07 | 52 |
neural keel | 1.56e-07 | 52 |
regional part of nervous system | 3.26e-07 | 54 |