FFCP PHASE1:Mm9::chr11:23795208..23795280,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216578 | |EntrezGene=216578 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=298 | |MCL_coexpression_id=298 | ||
|TSSclassifier=NA | |||
|UniProt=Q6PCL9,Q8BY05,Q8R1V7 | |UniProt=Q6PCL9,Q8BY05,Q8R1V7 | ||
|association_with_transcript=0bp_to_ENSMUST00000020513,ENSMUST00000102863,NM_172555,uc007ifp.2,uc007ifr.2,uc011xsg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000020513,ENSMUST00000102863,NM_172555,uc007ifp.2,uc007ifr.2,uc011xsg.1_5end | ||
|cluster_id=chr11:23795208..23795280,- | |||
|description=CAGE_peak_1_at_Papolg_5end | |description=CAGE_peak_1_at_Papolg_5end | ||
|id=chr11:23795208..23795280,- | |id=chr11:23795208..23795280,- | ||
|ontology_enrichment_celltype=CL:0000542!8.84e-07!13;CL:0000051!8.84e-07!13 | |ontology_enrichment_celltype=CL:0000542!8.84e-07!13;CL:0000051!8.84e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.84e-07,13;CL:0000051,8.84e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.08e-12!94;UBERON:0007811!5.33e-11!86;UBERON:0002370!4.89e-09!23;UBERON:0000974!4.89e-09!23;UBERON:0004807!4.89e-09!23;UBERON:0005058!4.89e-09!23;UBERON:0003351!4.89e-09!23;UBERON:0009113!4.89e-09!23;UBERON:0003295!4.89e-09!23;UBERON:0009722!4.89e-09!23;UBERON:0005562!4.89e-09!23;UBERON:0007690!4.89e-09!23;UBERON:0003408!8.77e-09!24;UBERON:0006562!1.28e-08!24;UBERON:0001557!1.28e-08!24;UBERON:0001042!1.28e-08!24;UBERON:0008814!1.28e-08!24;UBERON:0009145!1.28e-08!24;UBERON:0004177!3.49e-08!29;UBERON:0000065!1.88e-07!41;UBERON:0001004!2.37e-07!42 | |ontology_enrichment_uberon=UBERON:0000153!2.08e-12!94;UBERON:0007811!5.33e-11!86;UBERON:0002370!4.89e-09!23;UBERON:0000974!4.89e-09!23;UBERON:0004807!4.89e-09!23;UBERON:0005058!4.89e-09!23;UBERON:0003351!4.89e-09!23;UBERON:0009113!4.89e-09!23;UBERON:0003295!4.89e-09!23;UBERON:0009722!4.89e-09!23;UBERON:0005562!4.89e-09!23;UBERON:0007690!4.89e-09!23;UBERON:0003408!8.77e-09!24;UBERON:0006562!1.28e-08!24;UBERON:0001557!1.28e-08!24;UBERON:0001042!1.28e-08!24;UBERON:0008814!1.28e-08!24;UBERON:0009145!1.28e-08!24;UBERON:0004177!3.49e-08!29;UBERON:0000065!1.88e-07!41;UBERON:0001004!2.37e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.41e-10,43;UBERON:0007811,1.75e-09,36;UBERON:0002370,4.89e-09,23;UBERON:0000974,4.89e-09,23;UBERON:0004807,4.89e-09,23;UBERON:0005058,4.89e-09,23;UBERON:0003351,4.89e-09,23;UBERON:0009113,4.89e-09,23;UBERON:0003295,4.89e-09,23;UBERON:0009722,4.89e-09,23;UBERON:0005562,4.89e-09,23;UBERON:0007690,4.89e-09,23;UBERON:0003408,8.77e-09,24;UBERON:0006562,1.28e-08,24;UBERON:0001557,1.28e-08,24;UBERON:0001042,1.28e-08,24;UBERON:0008814,1.28e-08,24;UBERON:0009145,1.28e-08,24;UBERON:0004177,3.49e-08,29;UBERON:0005057,3.49e-08,29;UBERON:0000065,1.88e-07,41;UBERON:0001004,2.37e-07,42 | |||
|phase1_expression=15.2141404749554,12.2141392673776,12.2849794635175,31.4562779759103,19.5349334679075,10.5763941304491,13.783145795136,63.3995518098139,32.09982865058,35.577808000943,46.4000693891118,37.0940539328314,52.2162226290177,53.7635474876834,12.6581709489952,15.7930708564064,6.99561878128147,32.1771408665402,36.4724393391265,28.434106670468,21.941168858976,38.7234709683453,38.9187685817014,14.8792953197868,10.0940083669555,8.6134794617253,7.32295393470427,10.5580904016086,15.9619672343354,14.617747526076,11.5299865540758,12.065582795733,9.22597181376855,15.8481681015439,14.4425809875637,7.31432439577366,10.2084678131185,33.9010620896895,17.1893775795236,27.7467584306113,37.6468152339849,34.1522742479223,32.5291936530873,28.578577680456,29.0951792600007,30.4687608588391,3.9119567217402,2.39827672018491,2.19686182734472,4.47188767870852,4.4795654920116,0,20.3016953329861,16.6833292662609,32.2650047176765,10.2903774414379,15.1862723167541,10.3134418455488,13.5552028775931,10.5798195854407,6.33831403506179,3.38844532069132,1.77858959222228,0.449949858640699,2.96659908770092,2.8419204597844,2.09720077362883,1.53687322128622,18.0419925416751,17.010748229793,21.453146057841,9.42648248532552,14.1355866209033,20.4559634688973,18.0189485514284,17.4651569455904,17.6185409599022,24.6436562504412,21.3513081226178,15.5625819521629,15.7358746996145,24.4829284161677,10.6089539620525,17.4456409109821,17.72459674211,22.0971439105251,24.915044139843,17.8943467992289,11.1317504199781,9.8998743739889,15.3628179011889,12.0459342777394,0.679971333707751,4.31762553310254,11.695975514058,17.0250217096988,17.9768857768642,17.0430322578058,9.61208217030615,7.42013106471715,16.0561498545416,14.115912515575,25.4805239706646,35.5533351576666,7.79367747640371,7.09407623330276,6.57181778519218,18.2694207550496,73.7972968394439,20.6334573300106,12.6644288539279,17.9634632204163,12.2226213545711,19.1417753501831,16.8151851204058,12.5666591329675,12.8541383221874,22.846698393346,21.230653246797,15.2060838950565,15.6797478106879,14.5462575940567,31.6865994070808,35.7192572354088,24.5052646971742,18.6483650302272,11.7418822015802,5.99902730993408,8.25956475974921,31.6058249144176,40.7175536508578,31.0366249718775,30.5930803538407,29.407277592988,21.8177446787538,25.6341195647057,14.8685471221462,16.6705340617525,18.4487613656583,23.1486041475121,30.1879427673473,22.9902104433473,24.6685117833328,22.756427493193,25.10546818684,28.953700784376,21.1765897504987,25.3529303324235,21.3412313003514,28.9332302656763,28.8559843628876,16.6588756644957,23.0779216857246,18.805616992197,21.1955600500182,17.1169469463904,5.61770549850588,7.20574139921202,8.24074148247219,17.8128164380532,23.2180799381285,17.1058958387964,22.0172604094246,20.8570085652248,21.7516629171203,25.113666033044,16.6329508867764,14.5956677958962,15.9623054416076,22.6551100429151,20.7536152437391,18.8597983778679,20.1986106067767,18.1178665326502,32.1743621303115,30.5626698766475,36.6764849112016,14.0158800331678,27.5141843190452,26.0105072483691,18.1703120464152,14.5212137728807,16.9007313322101,14.6473732106671,16.6085171540579,13.0112174231969,14.0747716928151,13.9269530428806,13.2575579241002,12.5834717211591,19.8847005884719,17.922714592893,12.7077493638565,18.0512649923372,21.4144697778853,21.383389423758,17.2617713579187,12.3439043006961,17.0106284864252,19.0417090893687,17.1128613347099,12.7099078839455,8.89357881261447,19.520877368783,15.528160613943,14.3911751926306,14.4030686185837,13.9882752656402,13.2405442926338,13.2340223227373,13.619359049103,11.5315793538994,23.0029130443767,13.7692150637346,17.4741096944154,12.3763650194085,16.1457672169721,14.9557491622644,23.4636551511588,17.0542270593436,27.8670109715864,20.708900464573,20.6527418493882,22.4458384972033,19.9956658344252,16.7814937157707,27.7437853626896,21.7035395855799,22.0047580747332,31.297893110706,25.7300622980184,23.1438493730419,15.0791283939272,4.89515115436839,17.7035138286853,19.0396354950265,24.5642402681322,20.6292568402278,15.7377547561608,15.9056684138755,12.304820557234,12.4940398174924,16.8030250231583,12.9043150894378,16.2643032080148,15.0030561318081,11.334699646897,15.4895604692995,13.0444966722353,28.5975971615408,23.2781739741561,11.7523298420388,15.1484872198826,21.9410263553472,25.2215762845929,17.4802058031587,12.3952658355548,16.9744571780308,7.97315110778086,16.2940628410282,12.9214146584111,17.8131527443978,13.5469003786194,16.7499481705982,15.8127912862498,22.6898195146011,27.5756080660568,24.8484309763208,9.05510786479281,15.6466035573062,18.9754049997233,15.3397183137781,17.6067452044269,9.74287837166718,17.835049812842,19.0648863777438,14.9959310677374,24.8978241941635,21.7976976039472,21.5317141993516,16.9508728484454,18.5479216711919,22.7355052571284,21.6947603352296,18.9666677685616,16.9237231729842,18.8898417917106,20.1554248995019,23.5114071680163,18.7598102029349,17.3377998593732,17.7738344451046,15.4783970660955,27.6854479224383,20.5618395827738,22.1618219168265,16.308806464092,21.3270061934758,17.9057302271866,17.8020937227963,16.5306911450672,14.9200886930897,22.8122352993555,18.6401793926078,34.3852692597356,25.1187797353884,20.6823113071372,22.1674354712214,20.0197726390483,20.1057789334026,18.6598009446749,20.832701575032,35.3375990714646,55.3227636691554,32.2593607008809,47.0856569735986,13.7853146397312,14.4822449602406,22.4763023751585,27.0330310457897,35.1665997962839,32.3325759208716,29.9809740164392,43.4155734777035,30.5589294686549,38.2131241668626,46.9746985165607,47.1438024037614,51.3089600577088,17.2315091547561,9.98936790183291,14.8027863405635,12.5913462273059,19.5121489972512,18.0175176433135,25.2749241488826,17.7925754635625,10.5330141847426,31.6261031865557,40.9689460491387,35.5195218332426,21.4816477929609,31.5137959094495,29.4603619981983,23.6257875081132,34.2244114450408,38.5171047636574,30.5478583933574,28.8528826284011,27.9317411380722,21.683167930775,20.664070950805,11.319110781911,13.9721066422011,18.8909718631373,19.1612603232172,21.5015870426516,16.9307131881744,24.5874920893533,22.0692819421709,23.87858440482,19.59169663589,19.8726722586422,22.3858034903045,17.8461861955077,19.8696497077616,18.5438655361488,19.5774563778748,21.2578936478958,18.8124354528898,25.274236134416,22.8193874112756,23.5273451038327,18.1921406967104,19.5732930973867,21.5717163379031,17.654534799962,26.9348290395714,15.7784574105152,16.1547351095924,20.0523211153148,18.7473577835019,21.0268205969444,14.2392029424629,21.755639585423,18.9086527562503,14.7292015693009,12.7943023089319,16.2307484934295 | |phase1_expression=15.2141404749554,12.2141392673776,12.2849794635175,31.4562779759103,19.5349334679075,10.5763941304491,13.783145795136,63.3995518098139,32.09982865058,35.577808000943,46.4000693891118,37.0940539328314,52.2162226290177,53.7635474876834,12.6581709489952,15.7930708564064,6.99561878128147,32.1771408665402,36.4724393391265,28.434106670468,21.941168858976,38.7234709683453,38.9187685817014,14.8792953197868,10.0940083669555,8.6134794617253,7.32295393470427,10.5580904016086,15.9619672343354,14.617747526076,11.5299865540758,12.065582795733,9.22597181376855,15.8481681015439,14.4425809875637,7.31432439577366,10.2084678131185,33.9010620896895,17.1893775795236,27.7467584306113,37.6468152339849,34.1522742479223,32.5291936530873,28.578577680456,29.0951792600007,30.4687608588391,3.9119567217402,2.39827672018491,2.19686182734472,4.47188767870852,4.4795654920116,0,20.3016953329861,16.6833292662609,32.2650047176765,10.2903774414379,15.1862723167541,10.3134418455488,13.5552028775931,10.5798195854407,6.33831403506179,3.38844532069132,1.77858959222228,0.449949858640699,2.96659908770092,2.8419204597844,2.09720077362883,1.53687322128622,18.0419925416751,17.010748229793,21.453146057841,9.42648248532552,14.1355866209033,20.4559634688973,18.0189485514284,17.4651569455904,17.6185409599022,24.6436562504412,21.3513081226178,15.5625819521629,15.7358746996145,24.4829284161677,10.6089539620525,17.4456409109821,17.72459674211,22.0971439105251,24.915044139843,17.8943467992289,11.1317504199781,9.8998743739889,15.3628179011889,12.0459342777394,0.679971333707751,4.31762553310254,11.695975514058,17.0250217096988,17.9768857768642,17.0430322578058,9.61208217030615,7.42013106471715,16.0561498545416,14.115912515575,25.4805239706646,35.5533351576666,7.79367747640371,7.09407623330276,6.57181778519218,18.2694207550496,73.7972968394439,20.6334573300106,12.6644288539279,17.9634632204163,12.2226213545711,19.1417753501831,16.8151851204058,12.5666591329675,12.8541383221874,22.846698393346,21.230653246797,15.2060838950565,15.6797478106879,14.5462575940567,31.6865994070808,35.7192572354088,24.5052646971742,18.6483650302272,11.7418822015802,5.99902730993408,8.25956475974921,31.6058249144176,40.7175536508578,31.0366249718775,30.5930803538407,29.407277592988,21.8177446787538,25.6341195647057,14.8685471221462,16.6705340617525,18.4487613656583,23.1486041475121,30.1879427673473,22.9902104433473,24.6685117833328,22.756427493193,25.10546818684,28.953700784376,21.1765897504987,25.3529303324235,21.3412313003514,28.9332302656763,28.8559843628876,16.6588756644957,23.0779216857246,18.805616992197,21.1955600500182,17.1169469463904,5.61770549850588,7.20574139921202,8.24074148247219,17.8128164380532,23.2180799381285,17.1058958387964,22.0172604094246,20.8570085652248,21.7516629171203,25.113666033044,16.6329508867764,14.5956677958962,15.9623054416076,22.6551100429151,20.7536152437391,18.8597983778679,20.1986106067767,18.1178665326502,32.1743621303115,30.5626698766475,36.6764849112016,14.0158800331678,27.5141843190452,26.0105072483691,18.1703120464152,14.5212137728807,16.9007313322101,14.6473732106671,16.6085171540579,13.0112174231969,14.0747716928151,13.9269530428806,13.2575579241002,12.5834717211591,19.8847005884719,17.922714592893,12.7077493638565,18.0512649923372,21.4144697778853,21.383389423758,17.2617713579187,12.3439043006961,17.0106284864252,19.0417090893687,17.1128613347099,12.7099078839455,8.89357881261447,19.520877368783,15.528160613943,14.3911751926306,14.4030686185837,13.9882752656402,13.2405442926338,13.2340223227373,13.619359049103,11.5315793538994,23.0029130443767,13.7692150637346,17.4741096944154,12.3763650194085,16.1457672169721,14.9557491622644,23.4636551511588,17.0542270593436,27.8670109715864,20.708900464573,20.6527418493882,22.4458384972033,19.9956658344252,16.7814937157707,27.7437853626896,21.7035395855799,22.0047580747332,31.297893110706,25.7300622980184,23.1438493730419,15.0791283939272,4.89515115436839,17.7035138286853,19.0396354950265,24.5642402681322,20.6292568402278,15.7377547561608,15.9056684138755,12.304820557234,12.4940398174924,16.8030250231583,12.9043150894378,16.2643032080148,15.0030561318081,11.334699646897,15.4895604692995,13.0444966722353,28.5975971615408,23.2781739741561,11.7523298420388,15.1484872198826,21.9410263553472,25.2215762845929,17.4802058031587,12.3952658355548,16.9744571780308,7.97315110778086,16.2940628410282,12.9214146584111,17.8131527443978,13.5469003786194,16.7499481705982,15.8127912862498,22.6898195146011,27.5756080660568,24.8484309763208,9.05510786479281,15.6466035573062,18.9754049997233,15.3397183137781,17.6067452044269,9.74287837166718,17.835049812842,19.0648863777438,14.9959310677374,24.8978241941635,21.7976976039472,21.5317141993516,16.9508728484454,18.5479216711919,22.7355052571284,21.6947603352296,18.9666677685616,16.9237231729842,18.8898417917106,20.1554248995019,23.5114071680163,18.7598102029349,17.3377998593732,17.7738344451046,15.4783970660955,27.6854479224383,20.5618395827738,22.1618219168265,16.308806464092,21.3270061934758,17.9057302271866,17.8020937227963,16.5306911450672,14.9200886930897,22.8122352993555,18.6401793926078,34.3852692597356,25.1187797353884,20.6823113071372,22.1674354712214,20.0197726390483,20.1057789334026,18.6598009446749,20.832701575032,35.3375990714646,55.3227636691554,32.2593607008809,47.0856569735986,13.7853146397312,14.4822449602406,22.4763023751585,27.0330310457897,35.1665997962839,32.3325759208716,29.9809740164392,43.4155734777035,30.5589294686549,38.2131241668626,46.9746985165607,47.1438024037614,51.3089600577088,17.2315091547561,9.98936790183291,14.8027863405635,12.5913462273059,19.5121489972512,18.0175176433135,25.2749241488826,17.7925754635625,10.5330141847426,31.6261031865557,40.9689460491387,35.5195218332426,21.4816477929609,31.5137959094495,29.4603619981983,23.6257875081132,34.2244114450408,38.5171047636574,30.5478583933574,28.8528826284011,27.9317411380722,21.683167930775,20.664070950805,11.319110781911,13.9721066422011,18.8909718631373,19.1612603232172,21.5015870426516,16.9307131881744,24.5874920893533,22.0692819421709,23.87858440482,19.59169663589,19.8726722586422,22.3858034903045,17.8461861955077,19.8696497077616,18.5438655361488,19.5774563778748,21.2578936478958,18.8124354528898,25.274236134416,22.8193874112756,23.5273451038327,18.1921406967104,19.5732930973867,21.5717163379031,17.654534799962,26.9348290395714,15.7784574105152,16.1547351095924,20.0523211153148,18.7473577835019,21.0268205969444,14.2392029424629,21.755639585423,18.9086527562503,14.7292015693009,12.7943023089319,16.2307484934295 | ||
|short_description=p1@Papolg | |short_description=p1@Papolg | ||
}} | }} |
Latest revision as of 05:55, 27 September 2015
Short description: | p1@Papolg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Papolg_5end |
Coexpression cluster: | MCL_coexpression_mm9:298 |
Association with transcript: | 0bp_to_ENSMUST00000020513, ENSMUST00000102863, NM_172555, uc007ifp.2, uc007ifr.2, uc011xsg.1_5end |
EntrezGene: | Papolg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.84e-07 | 13 |
common lymphoid progenitor | 8.84e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 5.41e-10 | 43 |
craniocervical region | 1.75e-09 | 36 |
thymus | 4.89e-09 | 23 |
neck | 4.89e-09 | 23 |
respiratory system epithelium | 4.89e-09 | 23 |
hemolymphoid system gland | 4.89e-09 | 23 |
pharyngeal epithelium | 4.89e-09 | 23 |
thymic region | 4.89e-09 | 23 |
pharyngeal gland | 4.89e-09 | 23 |
entire pharyngeal arch endoderm | 4.89e-09 | 23 |
thymus primordium | 4.89e-09 | 23 |
early pharyngeal endoderm | 4.89e-09 | 23 |
gland of gut | 8.77e-09 | 24 |
pharynx | 1.28e-08 | 24 |
upper respiratory tract | 1.28e-08 | 24 |
chordate pharynx | 1.28e-08 | 24 |
pharyngeal arch system | 1.28e-08 | 24 |
pharyngeal region of foregut | 1.28e-08 | 24 |
hemopoietic organ | 3.49e-08 | 29 |
immune organ | 3.49e-08 | 29 |
respiratory tract | 1.88e-07 | 41 |
respiratory system | 2.37e-07 | 42 |