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FFCP PHASE1:Mm9::chr15:85166831..85166847,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54138
|EntrezGene=54138
|HGNC=
|HGNC=
|MCL_coexpression_id=3016
|TSSclassifier=NA
|UniProt=P28658
|UniProt=P28658
|association_with_transcript=20bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end
|association_with_transcript=20bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end
|cluster_id=chr15:85166831..85166847,+
|description=CAGE_peak_4_at_Atxn10_5end
|description=CAGE_peak_4_at_Atxn10_5end
|id=chr15:85166831..85166847,+
|id=chr15:85166831..85166847,+
|ontology_enrichment_celltype=CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0000055!4.03e-08!50;CL:0000540!4.18e-08!33;CL:0000047!4.18e-08!33;CL:0000031!4.18e-08!33;CL:0000404!4.18e-08!33;CL:0002319!4.32e-08!43
|ontology_enrichment_celltype=CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0000055!4.03e-08!50;CL:0000540!4.18e-08!33;CL:0000047!4.18e-08!33;CL:0000031!4.18e-08!33;CL:0000404!4.18e-08!33;CL:0002319!4.32e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000393,9.30e-09,39;CL:0000211,9.30e-09,39;CL:0000221,3.40e-08,44;CL:0000133,3.40e-08,44;CL:0000540,4.16e-08,33;CL:0000047,4.16e-08,33;CL:0000031,4.16e-08,33;CL:0000404,4.16e-08,33;CL:0002319,4.29e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.28e-16!75;UBERON:0001016!1.28e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!3.69e-12!102;UBERON:0000924!3.69e-12!102;UBERON:0006601!3.69e-12!102;UBERON:0001049!2.12e-11!52;UBERON:0005068!2.12e-11!52;UBERON:0006241!2.12e-11!52;UBERON:0007135!2.12e-11!52;UBERON:0000955!6.10e-11!50;UBERON:0006238!6.10e-11!50;UBERON:0002616!1.61e-10!49;UBERON:0002346!2.28e-10!71;UBERON:0003075!2.28e-10!71;UBERON:0007284!2.28e-10!71;UBERON:0002020!1.00e-09!34;UBERON:0000033!1.83e-09!63;UBERON:0007811!2.17e-09!86;UBERON:0003080!8.68e-09!40;UBERON:0000153!9.47e-09!94;UBERON:0002780!2.25e-08!39;UBERON:0001890!2.25e-08!39;UBERON:0006240!2.25e-08!39;UBERON:0003056!5.89e-08!49;UBERON:0002791!6.71e-08!29;UBERON:0003528!6.71e-08!29;UBERON:0001893!6.71e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.26e-16,75;UBERON:0001017,2.07e-15,73;UBERON:0004121,1.17e-12,95;UBERON:0000924,1.17e-12,95;UBERON:0006601,1.17e-12,95;UBERON:0000073,2.13e-12,54;UBERON:0001049,2.10e-11,52;UBERON:0005068,2.10e-11,52;UBERON:0006241,2.10e-11,52;UBERON:0007135,2.10e-11,52;UBERON:0002346,3.88e-11,64;UBERON:0003075,3.88e-11,64;UBERON:0007284,3.88e-11,64;UBERON:0002020,9.94e-10,34;UBERON:0000955,1.79e-09,47;UBERON:0006238,1.79e-09,47;UBERON:0002616,4.55e-09,46;UBERON:0003080,8.63e-09,40;UBERON:0010371,9.92e-09,73;UBERON:0010314,1.08e-08,92;UBERON:0002780,2.23e-08,39;UBERON:0001890,2.23e-08,39;UBERON:0006240,2.23e-08,39;UBERON:0003056,5.86e-08,49;UBERON:0003528,6.67e-08,29;UBERON:0002791,6.67e-08,29;UBERON:0001893,6.67e-08,29
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93612,1.03691978633434,3.72803587852155,6.20062232552609,5.83114529571517,5.12921320417003,4.083474955225,4.52059382172059,1.85851738039856,6.45464812551647,3.9061315453185,6.08184197669123,2.65742532908607,3.74439008135225,6.32022241256356,8.71718425747706,10.681939545142,11.433032422046,9.667441566044,7.9472541912506,7.45211787023807,9.00906115764921,7.97634954590366,10.36412570508,6.45287584875779,5.84747284438514,4.81059208201647,7.48012173962041,1.58711268530648,52.8326569030274,29.0672895414701,48.3507695128546,2.89784391048286,7.50729901804728,2.74727436400898,3.64426244434412,6.52043735245972,19.2015626489803,16.1113832777512,14.8952833494243,18.5601436931183,12.3314853558716,9.82012066606611,12.1504050041725,18.0128481289688,8.60970577069989,14.497288729051,8.71813719707084,5.1873233542134,8.87814749921498,5.34834777550247,4.19226325255965,4.41224420280034,4.66718128383392,4.12070114477788,4.81378814387723,3.53776096469316,4.81610669791456,3.9611531691076,3.09016974650612,3.13723246783859,2.64203157195821,4.76293691283074,3.01299247456624,2.89363830695558,2.88460130562315,3.97437084362873,4.11443102862498,3.37204031702741,5.00715998889374,3.92435324907287,4.89368778159719,2.62305284464197,4.20734337607377,4.20911538300549,5.43216455383447,3.92799590160417,4.50813068871862,3.15214343601803,0.818462086339379,3.71848418846318,4.05103883060397,3.99696924700713,3.27504251823572,10.9584237564632,10.9034349279241,7.72069966918304,3.47801753430632
|phase1_expression=8.48788889655408,0,0.454999239389536,0,0,1.00727563147134,1.63528848416868,4.9066862907799,5.34997144176334,6.78787126333781,2.05461561870606,2.71225340584144,3.76641605848653,3.58423649917889,0.999329285446988,0.809901069559304,1.39912375625629,3.3123527362615,2.33094537129756,1.69755860719212,3.06155844543851,14.9929336313337,17.7615856614476,2.55987876469451,1.83527424853736,0,0.86152399231815,0.861884930743556,0.190023419456374,1.00812051903972,1.99557459589774,1.27006134691926,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.612508068787107,44.3643528581122,46.880120671428,30.3643771504803,71.1760100517527,43.0318655523821,26.7030694167134,5.28766635497425,5.5757312170733,9.17733760808408,4.69434806608824,4.36050312760893,10.3252505885202,5.8328969722285,4.75953833526233,10.062679505548,2.68452169692378,5.07753499407941,7.39406358113421,13.6347501099052,10.601737277734,7.21940929188419,7.48570905180512,5.28990979272033,10.1413024560989,9.82649143000483,3.55717918444456,3.1496490104849,0.988866362566974,1.4209602298922,3.29560121570245,4.61061966385865,6.53244557543409,6.61529097825284,6.94072372459561,12.2829923293636,13.693849539,6.36952155917761,5.55903731905771,4.5960939330501,20.9220173898839,17.8762273319263,18.7399970572617,8.83638127792299,9.78917786545783,9.37644067002168,22.8930059181132,16.3201156909187,16.0438160165651,13.5529149317887,11.6744778255264,13.4207600994216,31.5020964266046,31.0599112038888,3.47837386442013,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,1.34408066129201,1.68533304158102,8.01022516116871,10.9110121933205,9.54016851177919,7.74638808771743,3.84979432242953,0,28.4426681261332,16.4533191168523,10.1343946190039,18.704404465547,1.59857431606684,2.07150306917737,3.85949561568544,6.93941307064543,6.08930956624282,5.76538743140146,5.42601505989441,9.05433044944927,1.50799909595611,59.0795972885154,1.01219549843938,2.65383165584962,5.50007289821191,1.98757366614354,1.93950101254089,0,4.09893115816166,8.16842156572475,1.02182822083437,18.2118989248999,17.3971791988088,16.7732699736445,15.8778077769112,8.23501085073528,7.53926112677186,13.5582969749976,10.4843337505436,19.5320761885986,19.4689515681309,8.1471491080253,3.98102305952298,4.29628689337247,1.26265113531884,7.67710613479952,7.12696523743766,5.22180176435513,4.52114453507145,8.64063539221864,7.17436833595159,5.99691037182265,5.17406741478031,10.3472636607764,6.99692496620931,4.39877810409872,8.11024209982027,5.83899223373756,4.179025998266,2.05782136407943,6.76716507182877,9.83098462238529,11.5806558201622,13.0715209721973,12.6346721246656,8.20841209933837,9.36322719597277,7.10234206755631,5.1158700254325,5.39934895105824,5.8133486187602,4.82892122519315,5.13767506415546,2.30383789878873,2.79084688934462,2.99954595319666,1.60819986167866,1.09775057645525,1.34206418760372,14.2997165023607,17.1850702673405,0,1.05780226665418,8.10495352033889,7.89604684325491,6.82997545007095,4.84040459096022,3.11329261382818,3.80451252225118,1.42358718463353,4.44687177754829,3.51869292320377,4.17808591286417,4.09424582950152,0,0.864552199498777,0.597423819763102,16.1217715810119,6.39791670614481,7.88954149711563,6.10953983535943,3.10323979468201,9.32806404541237,4.48979413582227,0.885660887877613,1.8839847340965,1.72756029490521,1.1858105083486,3.17005700860579,4.32429789249047,3.37293168577281,4.46292267054706,5.06472035480075,4.83789118384698,4.02774592431135,14.4300351829781,3.0201755450689,7.18841032636773,5.58211421502755,1.5601883655728,1.01031551178845,1.07638448113147,1.92977408545347,4.80358294433172,11.7484675297701,10.5927234687317,8.31750920298422,8.91822943496308,6.86775655511445,5.47500374037832,11.5128852236101,8.98520321405289,10.4088404134924,7.01600982092943,4.7520361267564,5.35323443784276,7.37710198765709,3.01582567878545,5.98296252200581,0.983528546038072,4.13905119457099,29.8624097377293,21.332526959781,16.0656246469142,1.51482556322624,10.0962630213202,7.41833614163613,9.47862950024315,10.2756583119597,9.80314165962534,9.05844898524264,8.50102473517278,10.5212108848072,13.0444966722353,15.7447445046685,2.98074178937364,6.23229612835393,7.81857404897165,2.47455184458803,1.32745138339963,12.3818124439041,7.25576536715402,4.90373207365335,5.02013217897314,4.61152721915891,7.75284879504663,10.1789444253702,4.9909632973861,1.26414703174326,1.05418608574999,1.03135543248187,5.44703369206061,7.56256594931503,6.07985813778946,4.92975180572662,4.25616560741457,5.70780216326626,5.43011767986999,14.9187825066154,28.8646200918364,55.5000025663209,3.74898276693435,0.49465875882444,6.78150592122803,3.01564624640779,3.46179797609096,3.28281799490123,4.95517422270746,26.1449675834819,0.854354403989263,8.2554747185289,4.44466865687308,2.44878994106098,1.23024804948923,0.457556346413045,16.6578861393978,17.4939315404573,14.5109972494645,0,8.22473583310952,5.08298667817122,4.10420295122845,2.92723614420256,3.49380101993884,3.77620169877498,4.95920734352016,1.04702376793612,1.03691978633434,3.72803587852155,6.20062232552609,5.83114529571517,5.12921320417003,4.083474955225,4.52059382172059,1.85851738039856,6.45464812551647,3.9061315453185,6.08184197669123,2.65742532908607,3.74439008135225,6.32022241256356,8.71718425747706,10.681939545142,11.433032422046,9.667441566044,7.9472541912506,7.45211787023807,9.00906115764921,7.97634954590366,10.36412570508,6.45287584875779,5.84747284438514,4.81059208201647,7.48012173962041,1.58711268530648,52.8326569030274,29.0672895414701,48.3507695128546,2.89784391048286,7.50729901804728,2.74727436400898,3.64426244434412,6.52043735245972,19.2015626489803,16.1113832777512,14.8952833494243,18.5601436931183,12.3314853558716,9.82012066606611,12.1504050041725,18.0128481289688,8.60970577069989,14.497288729051,8.71813719707084,5.1873233542134,8.87814749921498,5.34834777550247,4.19226325255965,4.41224420280034,4.66718128383392,4.12070114477788,4.81378814387723,3.53776096469316,4.81610669791456,3.9611531691076,3.09016974650612,3.13723246783859,2.64203157195821,4.76293691283074,3.01299247456624,2.89363830695558,2.88460130562315,3.97437084362873,4.11443102862498,3.37204031702741,5.00715998889374,3.92435324907287,4.89368778159719,2.62305284464197,4.20734337607377,4.20911538300549,5.43216455383447,3.92799590160417,4.50813068871862,3.15214343601803,0.818462086339379,3.71848418846318,4.05103883060397,3.99696924700713,3.27504251823572,10.9584237564632,10.9034349279241,7.72069966918304,3.47801753430632
|short_description=p4@Atxn10
|short_description=p4@Atxn10
}}
}}

Latest revision as of 06:16, 27 September 2015

Short description:p4@Atxn10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Atxn10_5end
Coexpression cluster:MCL_coexpression_mm9:3016
Association with transcript: 20bp_to_ENSMUST00000163242, NM_016843, uc007xdd.1_5end
EntrezGene:Atxn10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Atxn10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.76
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G844.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G971.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D931.50
Mouse Schwann, donor2.CNhs12573.11746-123F931.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A859.08
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.77
corpora quadrigemina, adult.CNhs10501.16-22A415.88
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C68.64
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E210.35
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E912.63
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G117.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G79.33
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F810.59
lung, embryo E15.CNhs11020.432-17C58.32
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A310.41
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C229.86
medulla oblongata, neonate N30.CNhs11200.1396-42A321.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I728.86
placenta, adult pregnant day17.CNhs10464.577-18G355.50
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H33.02
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C926.14
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.51
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E38.22
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C511.43
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F87.45
thymus, neonate N03.CNhs11137.2104-43C79.01
thymus, neonate N06.CNhs11197.681-26C47.98
thymus, neonate N07.CNhs11211.713-19D310.36
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G27.48
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H352.83
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G548.35
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I88.72
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C210.96
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell9.30e-0939
electrically active cell9.30e-0939
ectodermal cell3.40e-0844
neurectodermal cell3.40e-0844
neuron4.16e-0833
neuronal stem cell4.16e-0833
neuroblast4.16e-0833
electrically signaling cell4.16e-0833
neural cell4.29e-0843

Uber anatomy
Ontology termp-valuen
nervous system1.26e-1675
central nervous system2.07e-1573
ectoderm-derived structure1.17e-1295
ectoderm1.17e-1295
presumptive ectoderm1.17e-1295
regional part of nervous system2.13e-1254
neural tube2.10e-1152
neural rod2.10e-1152
future spinal cord2.10e-1152
neural keel2.10e-1152
neurectoderm3.88e-1164
neural plate3.88e-1164
presumptive neural plate3.88e-1164
gray matter9.94e-1034
brain1.79e-0947
future brain1.79e-0947
regional part of brain4.55e-0946
anterior neural tube8.63e-0940
ecto-epithelium9.92e-0973
structure with developmental contribution from neural crest1.08e-0892
regional part of forebrain2.23e-0839
forebrain2.23e-0839
future forebrain2.23e-0839
pre-chordal neural plate5.86e-0849
brain grey matter6.67e-0829
regional part of telencephalon6.67e-0829
telencephalon6.67e-0829
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