FFCP PHASE1:Mm9::chr1:59030265..59030284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70827|HGNC=|MCL_coexpression_id=15|UniProt=Q6P9N8,G3UZH5|association_with_transcript=0bp_to_ENSMUST00000027186,ENSMUST00000173590,ENSMUST00000173719_5end|description=CAGE_peak_1_at_Trak2_5end|id=chr1:59030265..59030284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.72e-08!33;UBERON:0007100!8.34e-07!18;UBERON:0000948!8.34e-07!18;UBERON:0005498!8.34e-07!18;UBERON:0004140!8.34e-07!18;UBERON:0009881!8.34e-07!18;UBERON:0004141!8.34e-07!18;UBERON:0003084!8.34e-07!18;UBERON:0007005!8.34e-07!18;UBERON:0004139!8.34e-07!18;UBERON:0004291!8.34e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.72e-08,33;UBERON:0007100,8.34e-07,18;UBERON:0000948,8.34e-07,18;UBERON:0005498,8.34e-07,18;UBERON:0004140,8.34e-07,18;UBERON:0009881,8.34e-07,18;UBERON:0004141,8.34e-07,18;UBERON:0003084,8.34e-07,18;UBERON:0007005,8.34e-07,18;UBERON:0004139,8.34e-07,18;UBERON:0004291,8.34e-07,18|phase1_expression=4.32401887182944,70.1440569355116,83.7198600476746,27.8267074402284,39.5707626657614,36.0940434610563,33.8738328863512,11.7502224331834,20.4143647119917,22.0020654742674,13.0125655851384,15.1567102091139,12.497653284978,12.5011175459166,225.515308749204,332.059438519315,408.544136826838,19.4009231695316,19.3331351384092,32.6780031884483,13.9470995847754,2.28369187762036,3.6567970479451,30.5585527535407,21.7938817013812,42.4931653445115,43.5069616120666,37.0610520219729,6.84084310042946,4.03248207615889,15.0776747245607,30.4814723260623,27.0628506537211,15.8481681015439,6.93243887403059,4.3221007793208,10.0042984568561,52.3164538421135,27.346737058333,34.0290433582969,24.7057224973026,30.7370468231301,24.2755176515577,6.79842817068117,8.11015449756117,7.52541683862894,5.47673941043627,6.5407546914134,4.83309602015838,8.1660557611199,4.75953833526233,1.43752564364972,25.6707387268337,21.7608642603403,16.4685961579807,17.7509010864803,18.6246735960192,24.2365883370398,10.9250888864183,11.6378015439847,13.3104594736298,8.80995783379743,5.33576877666684,2.6996991518442,1.97773272513395,1.4209602298922,3.89480143673926,4.2264013585371,14.9313041724208,15.255671031481,15.1433972172995,14.2825492201902,15.0190607847097,7.59442955132715,7.95517409451362,14.7075005857603,17.6185409599022,24.6436562504412,19.8152427900554,8.44072241473241,9.33173964744578,8.33461392890816,18.9844439320939,18.0084035210138,20.7805616976462,14.4368006882097,11.8168495063255,8.01517617048792,9.31432177998164,5.97015324843606,49.2769630792852,14.6272059086836,15.6393406752783,4.31762553310254,5.84798775702902,15.2329141613094,28.0888840263504,7.49893419343454,7.53379413348319,4.94675404314476,4.92951969218382,14.115912515575,22.9324715735981,14.2213340630666,6.71122227134764,5.32055717497707,5.05524445014783,18.3836046347687,17.8667139716548,10.984718290797,8.15381035800839,11.2652226975492,11.3001593655469,6.78251882486802,8.58397562090645,6.03199638382442,18.7868175478124,22.846698393346,157.460678247078,27.662131341007,111.304125304038,101.823803158397,11.1835056730873,12.5895742714965,13.1951425292477,7.91916871146633,5.03223522924865,3.59941638596045,4.95573885584952,15.1288545798871,22.4175295381127,4.64921102817598,18.7730265807659,21.2243829584174,19.9476522777178,24.6606719862992,4.58277137326423,75.7638451015467,16.9324248150562,12.8369532090749,4.68433594665733,8.73627996847197,14.4049703844279,22.3043130396858,24.901358689386,42.2775276940004,53.9721933464038,28.9747775227698,3.23351989399263,7.18603104637713,8.97350733236139,7.23345917010997,5.28289773528636,10.447564995665,6.99659263787008,5.37392520409932,0.702213187313235,2.31613116403244,3.9782889915383,32.1044947430028,20.6382932783365,23.4080679899319,36.2219445445372,34.4337405557957,29.9278199001514,31.3920825413051,37.0217293931474,25.9219060055116,26.3295759861569,37.1018468818755,49.2087673943344,49.8541957120383,60.1567315897479,50.4616134538998,19.1363853193356,12.8630765474106,8.26046957459495,6.08236303326152,4.26576501070468,7.19933682767359,10.4382643670896,6.45387278794696,6.67134131534611,7.22857379227725,8.54152310780121,4.6115707322723,3.2673577144035,4.37704238490532,3.50935356814416,9.88701349519644,6.91641759599022,9.75792238946399,5.50036912763937,11.1963542357534,13.5249282807697,11.8117770150282,13.5766741017338,13.3258057791605,19.7297995827683,39.2642993625742,35.9527086756748,30.6024966526065,10.3758419480502,124.800139075638,144.863979398431,207.09800550645,238.563502752879,216.335912297918,165.252177806141,138.094145976389,82.8511008820431,47.7736858947262,20.1275489138296,20.4677521217677,8.42501717409313,5.55673531483646,9.50806291666135,5.78932225636041,10.5309318394965,9.47457058852424,11.0816183980578,8.14776411720903,6.33663670378956,7.37027532743989,11.1880511216426,10.9274842800367,12.4531763843891,9.30151696524855,11.3212885746816,16.3863314715738,10.8791538575514,11.8612228036839,3.01582567878545,7.61467957346193,14.2611639175521,9.3818493743609,22.6376331882787,30.2406151407884,5.24591825205361,35.0934588814078,15.7754109708128,16.7888660047555,15.5104846367615,14.5770966751057,12.4767257486141,21.7968928707401,18.6212922770451,17.5353514746787,19.7643888973262,19.921921618152,10.9293865610367,5.1639025063504,8.1443479676788,8.90838664051691,9.2921596837974,8.01176099311439,6.95344181018927,5.65815239267694,9.44966057218473,9.53048958626175,8.5281336745513,7.99774204850512,9.26893183800275,6.63677191665214,18.9753495434998,10.3135543248187,9.53230896110606,6.66226047915848,2.58717367565509,6.21577401591618,6.20690817747958,6.59964625127661,7.24015690649332,3.95804433848979,26.2832313031356,21.6068712281097,9.70324951441832,19.4565778470946,5.16686165426898,10.434136012571,11.2210003362948,12.8029901801148,6.70405924248657,32.2640025498287,173.092202248225,14.4470807574256,55.3731636835438,263.715839806567,220.624483541735,191.944887320272,6.96911562974807,6.9975726161829,6.63359874261234,10.5013767981662,6.80122386199441,9.55601495496189,6.69633113095168,6.690825472463,7.42432716737004,11.3286050963249,9.4224939526883,13.0877970992015,16.7203315546413,9.94142900939081,3.38215763210514,5.23307911153926,4.96375471371293,4.4723773319131,5.8121920564979,5.23763989021412,6.33729088687071,7.29144555126121,7.02557607652263,4.1069300540421,5.47257011889944,10.1123558601017,5.47358081283443,3.59488350076895,7.14564526377873,8.23522800070415,8.34461690081313,6.12996792551841,7.23678683155428,8.27924889574811,8.00171469877498,7.66279007039988,10.622909000633,8.37043022270866,8.76576766361767,30.6086017880535,12.2092274355736,15.5204971934393,12.75923084367,10.6254276717705,12.0116784288756,7.3260649706906,4.50173596066038,7.02200945649509,32.7556068717899,38.6673198666029,41.2484769676366,39.6980851213918,26.718218271055,15.107877947794,18.9006300064906,14.8605997063993,19.4851235863208,18.6393712230655,4.4628559461196,13.167820822234,28.1710449494321,47.4058098283173,27.0400979790097,25.554247674552,26.2251138805906,29.4630131851619,23.7480215097943,25.2697211763797,25.8548885888045,29.9915882803861,24.8149994795188,24.0734573042308,26.3054447816709,35.7220268462305,26.4216263154271,21.7987419123987,21.8405527425753,31.9421656691642,27.0866709384478,25.5565160869446,30.0429599333624,27.0344334936131,25.5977514729699,25.5536115832863,25.0611322835698,25.7808317209086,30.8275338430106,24.1291176812828,26.4556090416908,23.8380847348864,27.8277109355389,29.4379998253335,29.9005247020769,8.49355964989016,18.7145286756327,22.346589621023,8.99055160723564,30.8827986767322,32.9252326580998|short_description=p1@Trak2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70827 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9N8,G3UZH5 | |||
|association_with_transcript=0bp_to_ENSMUST00000027186,ENSMUST00000173590,ENSMUST00000173719_5end | |||
|cluster_id=chr1:59030265..59030284,- | |||
|description=CAGE_peak_1_at_Trak2_5end | |||
|id=chr1:59030265..59030284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.72e-08!33;UBERON:0007100!8.34e-07!18;UBERON:0000948!8.34e-07!18;UBERON:0005498!8.34e-07!18;UBERON:0004140!8.34e-07!18;UBERON:0009881!8.34e-07!18;UBERON:0004141!8.34e-07!18;UBERON:0003084!8.34e-07!18;UBERON:0007005!8.34e-07!18;UBERON:0004139!8.34e-07!18;UBERON:0004291!8.34e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.72e-08,33;UBERON:0007100,8.34e-07,18;UBERON:0000948,8.34e-07,18;UBERON:0005498,8.34e-07,18;UBERON:0004140,8.34e-07,18;UBERON:0009881,8.34e-07,18;UBERON:0004141,8.34e-07,18;UBERON:0003084,8.34e-07,18;UBERON:0007005,8.34e-07,18;UBERON:0004139,8.34e-07,18;UBERON:0004291,8.34e-07,18 | |||
|phase1_expression=4.32401887182944,70.1440569355116,83.7198600476746,27.8267074402284,39.5707626657614,36.0940434610563,33.8738328863512,11.7502224331834,20.4143647119917,22.0020654742674,13.0125655851384,15.1567102091139,12.497653284978,12.5011175459166,225.515308749204,332.059438519315,408.544136826838,19.4009231695316,19.3331351384092,32.6780031884483,13.9470995847754,2.28369187762036,3.6567970479451,30.5585527535407,21.7938817013812,42.4931653445115,43.5069616120666,37.0610520219729,6.84084310042946,4.03248207615889,15.0776747245607,30.4814723260623,27.0628506537211,15.8481681015439,6.93243887403059,4.3221007793208,10.0042984568561,52.3164538421135,27.346737058333,34.0290433582969,24.7057224973026,30.7370468231301,24.2755176515577,6.79842817068117,8.11015449756117,7.52541683862894,5.47673941043627,6.5407546914134,4.83309602015838,8.1660557611199,4.75953833526233,1.43752564364972,25.6707387268337,21.7608642603403,16.4685961579807,17.7509010864803,18.6246735960192,24.2365883370398,10.9250888864183,11.6378015439847,13.3104594736298,8.80995783379743,5.33576877666684,2.6996991518442,1.97773272513395,1.4209602298922,3.89480143673926,4.2264013585371,14.9313041724208,15.255671031481,15.1433972172995,14.2825492201902,15.0190607847097,7.59442955132715,7.95517409451362,14.7075005857603,17.6185409599022,24.6436562504412,19.8152427900554,8.44072241473241,9.33173964744578,8.33461392890816,18.9844439320939,18.0084035210138,20.7805616976462,14.4368006882097,11.8168495063255,8.01517617048792,9.31432177998164,5.97015324843606,49.2769630792852,14.6272059086836,15.6393406752783,4.31762553310254,5.84798775702902,15.2329141613094,28.0888840263504,7.49893419343454,7.53379413348319,4.94675404314476,4.92951969218382,14.115912515575,22.9324715735981,14.2213340630666,6.71122227134764,5.32055717497707,5.05524445014783,18.3836046347687,17.8667139716548,10.984718290797,8.15381035800839,11.2652226975492,11.3001593655469,6.78251882486802,8.58397562090645,6.03199638382442,18.7868175478124,22.846698393346,157.460678247078,27.662131341007,111.304125304038,101.823803158397,11.1835056730873,12.5895742714965,13.1951425292477,7.91916871146633,5.03223522924865,3.59941638596045,4.95573885584952,15.1288545798871,22.4175295381127,4.64921102817598,18.7730265807659,21.2243829584174,19.9476522777178,24.6606719862992,4.58277137326423,75.7638451015467,16.9324248150562,12.8369532090749,4.68433594665733,8.73627996847197,14.4049703844279,22.3043130396858,24.901358689386,42.2775276940004,53.9721933464038,28.9747775227698,3.23351989399263,7.18603104637713,8.97350733236139,7.23345917010997,5.28289773528636,10.447564995665,6.99659263787008,5.37392520409932,0.702213187313235,2.31613116403244,3.9782889915383,32.1044947430028,20.6382932783365,23.4080679899319,36.2219445445372,34.4337405557957,29.9278199001514,31.3920825413051,37.0217293931474,25.9219060055116,26.3295759861569,37.1018468818755,49.2087673943344,49.8541957120383,60.1567315897479,50.4616134538998,19.1363853193356,12.8630765474106,8.26046957459495,6.08236303326152,4.26576501070468,7.19933682767359,10.4382643670896,6.45387278794696,6.67134131534611,7.22857379227725,8.54152310780121,4.6115707322723,3.2673577144035,4.37704238490532,3.50935356814416,9.88701349519644,6.91641759599022,9.75792238946399,5.50036912763937,11.1963542357534,13.5249282807697,11.8117770150282,13.5766741017338,13.3258057791605,19.7297995827683,39.2642993625742,35.9527086756748,30.6024966526065,10.3758419480502,124.800139075638,144.863979398431,207.09800550645,238.563502752879,216.335912297918,165.252177806141,138.094145976389,82.8511008820431,47.7736858947262,20.1275489138296,20.4677521217677,8.42501717409313,5.55673531483646,9.50806291666135,5.78932225636041,10.5309318394965,9.47457058852424,11.0816183980578,8.14776411720903,6.33663670378956,7.37027532743989,11.1880511216426,10.9274842800367,12.4531763843891,9.30151696524855,11.3212885746816,16.3863314715738,10.8791538575514,11.8612228036839,3.01582567878545,7.61467957346193,14.2611639175521,9.3818493743609,22.6376331882787,30.2406151407884,5.24591825205361,35.0934588814078,15.7754109708128,16.7888660047555,15.5104846367615,14.5770966751057,12.4767257486141,21.7968928707401,18.6212922770451,17.5353514746787,19.7643888973262,19.921921618152,10.9293865610367,5.1639025063504,8.1443479676788,8.90838664051691,9.2921596837974,8.01176099311439,6.95344181018927,5.65815239267694,9.44966057218473,9.53048958626175,8.5281336745513,7.99774204850512,9.26893183800275,6.63677191665214,18.9753495434998,10.3135543248187,9.53230896110606,6.66226047915848,2.58717367565509,6.21577401591618,6.20690817747958,6.59964625127661,7.24015690649332,3.95804433848979,26.2832313031356,21.6068712281097,9.70324951441832,19.4565778470946,5.16686165426898,10.434136012571,11.2210003362948,12.8029901801148,6.70405924248657,32.2640025498287,173.092202248225,14.4470807574256,55.3731636835438,263.715839806567,220.624483541735,191.944887320272,6.96911562974807,6.9975726161829,6.63359874261234,10.5013767981662,6.80122386199441,9.55601495496189,6.69633113095168,6.690825472463,7.42432716737004,11.3286050963249,9.4224939526883,13.0877970992015,16.7203315546413,9.94142900939081,3.38215763210514,5.23307911153926,4.96375471371293,4.4723773319131,5.8121920564979,5.23763989021412,6.33729088687071,7.29144555126121,7.02557607652263,4.1069300540421,5.47257011889944,10.1123558601017,5.47358081283443,3.59488350076895,7.14564526377873,8.23522800070415,8.34461690081313,6.12996792551841,7.23678683155428,8.27924889574811,8.00171469877498,7.66279007039988,10.622909000633,8.37043022270866,8.76576766361767,30.6086017880535,12.2092274355736,15.5204971934393,12.75923084367,10.6254276717705,12.0116784288756,7.3260649706906,4.50173596066038,7.02200945649509,32.7556068717899,38.6673198666029,41.2484769676366,39.6980851213918,26.718218271055,15.107877947794,18.9006300064906,14.8605997063993,19.4851235863208,18.6393712230655,4.4628559461196,13.167820822234,28.1710449494321,47.4058098283173,27.0400979790097,25.554247674552,26.2251138805906,29.4630131851619,23.7480215097943,25.2697211763797,25.8548885888045,29.9915882803861,24.8149994795188,24.0734573042308,26.3054447816709,35.7220268462305,26.4216263154271,21.7987419123987,21.8405527425753,31.9421656691642,27.0866709384478,25.5565160869446,30.0429599333624,27.0344334936131,25.5977514729699,25.5536115832863,25.0611322835698,25.7808317209086,30.8275338430106,24.1291176812828,26.4556090416908,23.8380847348864,27.8277109355389,29.4379998253335,29.9005247020769,8.49355964989016,18.7145286756327,22.346589621023,8.99055160723564,30.8827986767322,32.9252326580998 | |||
|short_description=p1@Trak2 | |||
}} |
Latest revision as of 06:25, 27 September 2015
Short description: | p1@Trak2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trak2_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000027186, ENSMUST00000173590, ENSMUST00000173719_5end |
EntrezGene: | Trak2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.72e-08 | 33 |
primary circulatory organ | 8.34e-07 | 18 |
heart | 8.34e-07 | 18 |
primitive heart tube | 8.34e-07 | 18 |
primary heart field | 8.34e-07 | 18 |
anterior lateral plate mesoderm | 8.34e-07 | 18 |
heart tube | 8.34e-07 | 18 |
heart primordium | 8.34e-07 | 18 |
cardiac mesoderm | 8.34e-07 | 18 |
cardiogenic plate | 8.34e-07 | 18 |
heart rudiment | 8.34e-07 | 18 |