Personal tools

FFCP PHASE1:Mm9::chr11:3189171..3189197,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=56218|HGNC=|UniProt=|association_with_transcript=1bp_to_ENSMUST00000101644_5end|description=CAGE_peak_4_at_Patz1_5end|id=chr11:3189171..3189197,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!9.00e-09!66;UBERON:0006554!1.14e-07!16;UBERON:0001008!1.52e-07!17;UBERON:0002100!1.57e-07!98;UBERON:0002113!3.34e-07!14;UBERON:0003918!3.34e-07!14;UBERON:0005095!3.34e-07!14;UBERON:0007687!3.34e-07!14;UBERON:0005177!5.00e-07!85;UBERON:0005172!7.00e-07!49;UBERON:0005173!7.00e-07!49;UBERON:0002417!7.00e-07!49;UBERON:0000916!7.00e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.38e-09,66;UBERON:0002100,1.29e-08,90;UBERON:0002113,4.94e-08,14;UBERON:0003918,4.94e-08,14;UBERON:0011143,4.94e-08,14;UBERON:0005095,4.94e-08,14;UBERON:0007687,4.94e-08,14;UBERON:0005177,5.36e-08,79;UBERON:0005172,2.49e-07,49;UBERON:0005173,2.49e-07,49;UBERON:0002417,2.49e-07,49;UBERON:0000916,2.49e-07,49;UBERON:0003103,5.34e-07,43;UBERON:0006554,5.56e-07,18;UBERON:0001008,6.34e-07,19;UBERON:0003104,9.62e-07,61;UBERON:0009142,9.62e-07,61|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0,2.68606835059024,2.10251376535973,0,0.422366166455,0.468129052643987,0,0.0797721589953364,0,0.262261207256992,5.3297561890506,3.03712901084739,3.49780939064073,0.946386496074713,1.09691546884591,2.54633791078818,2.29616883407888,0.893618560807968,0.261199789138935,0.47997726838022,2.06468352960453,1.72269589234506,0.86152399231815,1.29282739611533,0.570070258369122,0.504060259519861,0.886922042621219,3.81018404075779,4.30545351309199,0,0.866554859253824,2.99222361645286,4.28755648150975,3.76678467663217,0.7813353445238,0,0,0.683045484958446,1.45653105909346,1.6366586336825,1.11514624341466,0.550640256485045,0,1.30815093828268,2.19686182734472,2.13872888981712,0.979904951377538,0,1.51004345451963,0,0,2.05807548828758,1.14613375975503,0.515672092277442,1.21389876515759,0,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0,1.19840044207362,1.53687322128622,0.207379224616955,0.135005938331691,0,1.42825492201902,1.10434270475807,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.791317726381163,0.823388792421687,0.52091337055676,0.558365998002762,0,1.5279824777681,0.589257170947335,0.284743361598206,0.559198337475902,1.06016670666458,3.02286240427142,2.02905142091174,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0.702222100658759,0.852151612890289,2.07828803682295,2.12003744706204,0.704217098883403,0,2.54805239706646,0,1.29894624606728,1.01343946190039,0.505524445014783,1.48439043634778,0.258937883647172,0.593768556259299,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.23517741427141,1.38233250462643,0.247194967734374,0.144599356919912,1.76922110389975,1.7794353494215,1.76673214768315,2.42437626567611,1.86391761218122,0,1.46612694769419,0.510914110417183,0.838705871541442,1.79970819298022,1.27070227073065,1.19832511523858,0,0.251308704225729,0.695297280769106,0.767146371990992,0.83115217823824,0.648965052271031,0.81471491080253,3.4833951770826,4.80173241023982,0.420883711772948,2.21204753036596,2.29902104433473,1.80062129805349,0.753524089178575,1.15662048557257,1.0249097622788,0.843315521037559,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.219195732427575,0,0.696504333044333,0.61734640922383,1.19420560091096,0,0.257347907114715,0.568326998791185,1.44988040774851,1.87620847984877,0.540186184383045,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,2.41446061259657,1.40118410840603,1.97471819896177,1.97000956894914,1.4592385718254,1.46199987425332,0.658650345873152,1.61047702512446,0.420579897128254,0.411618449517138,0.330418782983798,0.793351699990633,0.639864751605702,0.696710015581316,0.257734922644187,0.605050573870028,2.00140239460383,0.760902504450237,0.949058123089023,1.4822905925161,1.50801125280162,0.596869416123452,1.36474860983384,0.898819408654221,0.864552199498777,0.995706366271836,1.32767530667157,2.85621281524322,2.25415471346161,1.83286195060783,2.52138233317913,2.31448205638051,1.89709611372772,3.69025369949005,3.61097074035162,4.31890073726302,0.296452627087149,2.8363667971736,4.52085688760367,2.69834534861824,3.24576194221605,2.65294875727659,1.2731292589071,0.863088412352432,0.810676133875177,1.09824565275233,1.43768206527355,1.11642284300551,1.5601883655728,1.01031551178845,0.538192240565737,1.4473305640901,1.66277871149944,0.947457058852424,0.162964976442026,0.339490171550376,1.40814148973101,1.50755631697634,1.42826184531608,2.34160377429359,0.788175720530955,2.43611158613652,3.02964060449226,2.78567635016755,2.41758974612254,2.16973587872267,0,1.08781136763742,0.491764273019036,0.827810238914197,0.642202359951168,1.17211686592203,0.655739781506702,0.757412781613119,0.315508219416257,0.390438744296638,1.50796378412959,0,0.891194696329576,0.283076530788832,2.02405350837447,1.46127928955656,0.790575555893047,0,0.851640511249612,1.24645922567079,0.651547837414304,2.14461159864296,0,0.971122544619926,1.209294227859,1.13163047853539,0.885905678642318,1.84461088766356,0.516856586336442,1.81766864738753,0,0.948110273807448,0,1.03135543248187,1.02131881726136,0.900305470156551,1.03486947026204,0.857348140126369,0.886701168211368,0.713475270408282,0.987294123612726,1.2178597964584,0.469343416127421,0.847328283455281,2.8668691747145,0.49465875882444,0.484393280087717,0.422190474497091,0.477489376012546,1.14898629821543,1.1659233465194,0.741701208042039,5.29699730473343,0.619160603889667,2.22233432843654,7.15800136617826,7.24479406921433,4.80434163733698,0.679913719975421,0.419854356970974,0.967399816630967,0,1.26534397432454,1.21991680276109,2.05210147561422,1.04544148007234,1.09181281873089,1.21377911746339,0.909188012978695,1.83229159388821,1.03691978633434,0,0,1.49516546043979,0.66183396182839,0.972255941720238,0.516639293910924,0.506868376472335,0.58678619322877,2.0832701575032,2.62148361064277,0.966336483304024,0,0,1.41907650703115,0.821687657318618,0.649604114888975,0.358053391334963,0.39736270956253,0.600977247599844,0.147689527174577,0.403865799792591,0.228620419965,0.100826185136841,0.194915761479505,0.481059208201647,0.467507608726276,0.453460767230423,0.443971906748129,1.43542170575161,0.839423081820392,1.15913756419314,5.06742683718191,2.56412273974171,1.07184189539533,3.51100472824754,0,0,0,0.515559547031063,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,2.38710899443606,1.19707462020309,1.53660245178721,0.729320151204882,0.419226325255965,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,1.32479028120958,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,1.05227884575137,0.679020569229309,0,0.237270036248348,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,1.15933917810211|short_description=p4@Patz1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56218
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000101644_5end
|cluster_id=chr11:3189171..3189197,+
|description=CAGE_peak_4_at_Patz1_5end
|id=chr11:3189171..3189197,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!9.00e-09!66;UBERON:0006554!1.14e-07!16;UBERON:0001008!1.52e-07!17;UBERON:0002100!1.57e-07!98;UBERON:0002113!3.34e-07!14;UBERON:0003918!3.34e-07!14;UBERON:0005095!3.34e-07!14;UBERON:0007687!3.34e-07!14;UBERON:0005177!5.00e-07!85;UBERON:0005172!7.00e-07!49;UBERON:0005173!7.00e-07!49;UBERON:0002417!7.00e-07!49;UBERON:0000916!7.00e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.38e-09,66;UBERON:0002100,1.29e-08,90;UBERON:0002113,4.94e-08,14;UBERON:0003918,4.94e-08,14;UBERON:0011143,4.94e-08,14;UBERON:0005095,4.94e-08,14;UBERON:0007687,4.94e-08,14;UBERON:0005177,5.36e-08,79;UBERON:0005172,2.49e-07,49;UBERON:0005173,2.49e-07,49;UBERON:0002417,2.49e-07,49;UBERON:0000916,2.49e-07,49;UBERON:0003103,5.34e-07,43;UBERON:0006554,5.56e-07,18;UBERON:0001008,6.34e-07,19;UBERON:0003104,9.62e-07,61;UBERON:0009142,9.62e-07,61
|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0,2.68606835059024,2.10251376535973,0,0.422366166455,0.468129052643987,0,0.0797721589953364,0,0.262261207256992,5.3297561890506,3.03712901084739,3.49780939064073,0.946386496074713,1.09691546884591,2.54633791078818,2.29616883407888,0.893618560807968,0.261199789138935,0.47997726838022,2.06468352960453,1.72269589234506,0.86152399231815,1.29282739611533,0.570070258369122,0.504060259519861,0.886922042621219,3.81018404075779,4.30545351309199,0,0.866554859253824,2.99222361645286,4.28755648150975,3.76678467663217,0.7813353445238,0,0,0.683045484958446,1.45653105909346,1.6366586336825,1.11514624341466,0.550640256485045,0,1.30815093828268,2.19686182734472,2.13872888981712,0.979904951377538,0,1.51004345451963,0,0,2.05807548828758,1.14613375975503,0.515672092277442,1.21389876515759,0,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0,1.19840044207362,1.53687322128622,0.207379224616955,0.135005938331691,0,1.42825492201902,1.10434270475807,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.791317726381163,0.823388792421687,0.52091337055676,0.558365998002762,0,1.5279824777681,0.589257170947335,0.284743361598206,0.559198337475902,1.06016670666458,3.02286240427142,2.02905142091174,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0.702222100658759,0.852151612890289,2.07828803682295,2.12003744706204,0.704217098883403,0,2.54805239706646,0,1.29894624606728,1.01343946190039,0.505524445014783,1.48439043634778,0.258937883647172,0.593768556259299,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.23517741427141,1.38233250462643,0.247194967734374,0.144599356919912,1.76922110389975,1.7794353494215,1.76673214768315,2.42437626567611,1.86391761218122,0,1.46612694769419,0.510914110417183,0.838705871541442,1.79970819298022,1.27070227073065,1.19832511523858,0,0.251308704225729,0.695297280769106,0.767146371990992,0.83115217823824,0.648965052271031,0.81471491080253,3.4833951770826,4.80173241023982,0.420883711772948,2.21204753036596,2.29902104433473,1.80062129805349,0.753524089178575,1.15662048557257,1.0249097622788,0.843315521037559,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.219195732427575,0,0.696504333044333,0.61734640922383,1.19420560091096,0,0.257347907114715,0.568326998791185,1.44988040774851,1.87620847984877,0.540186184383045,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,2.41446061259657,1.40118410840603,1.97471819896177,1.97000956894914,1.4592385718254,1.46199987425332,0.658650345873152,1.61047702512446,0.420579897128254,0.411618449517138,0.330418782983798,0.793351699990633,0.639864751605702,0.696710015581316,0.257734922644187,0.605050573870028,2.00140239460383,0.760902504450237,0.949058123089023,1.4822905925161,1.50801125280162,0.596869416123452,1.36474860983384,0.898819408654221,0.864552199498777,0.995706366271836,1.32767530667157,2.85621281524322,2.25415471346161,1.83286195060783,2.52138233317913,2.31448205638051,1.89709611372772,3.69025369949005,3.61097074035162,4.31890073726302,0.296452627087149,2.8363667971736,4.52085688760367,2.69834534861824,3.24576194221605,2.65294875727659,1.2731292589071,0.863088412352432,0.810676133875177,1.09824565275233,1.43768206527355,1.11642284300551,1.5601883655728,1.01031551178845,0.538192240565737,1.4473305640901,1.66277871149944,0.947457058852424,0.162964976442026,0.339490171550376,1.40814148973101,1.50755631697634,1.42826184531608,2.34160377429359,0.788175720530955,2.43611158613652,3.02964060449226,2.78567635016755,2.41758974612254,2.16973587872267,0,1.08781136763742,0.491764273019036,0.827810238914197,0.642202359951168,1.17211686592203,0.655739781506702,0.757412781613119,0.315508219416257,0.390438744296638,1.50796378412959,0,0.891194696329576,0.283076530788832,2.02405350837447,1.46127928955656,0.790575555893047,0,0.851640511249612,1.24645922567079,0.651547837414304,2.14461159864296,0,0.971122544619926,1.209294227859,1.13163047853539,0.885905678642318,1.84461088766356,0.516856586336442,1.81766864738753,0,0.948110273807448,0,1.03135543248187,1.02131881726136,0.900305470156551,1.03486947026204,0.857348140126369,0.886701168211368,0.713475270408282,0.987294123612726,1.2178597964584,0.469343416127421,0.847328283455281,2.8668691747145,0.49465875882444,0.484393280087717,0.422190474497091,0.477489376012546,1.14898629821543,1.1659233465194,0.741701208042039,5.29699730473343,0.619160603889667,2.22233432843654,7.15800136617826,7.24479406921433,4.80434163733698,0.679913719975421,0.419854356970974,0.967399816630967,0,1.26534397432454,1.21991680276109,2.05210147561422,1.04544148007234,1.09181281873089,1.21377911746339,0.909188012978695,1.83229159388821,1.03691978633434,0,0,1.49516546043979,0.66183396182839,0.972255941720238,0.516639293910924,0.506868376472335,0.58678619322877,2.0832701575032,2.62148361064277,0.966336483304024,0,0,1.41907650703115,0.821687657318618,0.649604114888975,0.358053391334963,0.39736270956253,0.600977247599844,0.147689527174577,0.403865799792591,0.228620419965,0.100826185136841,0.194915761479505,0.481059208201647,0.467507608726276,0.453460767230423,0.443971906748129,1.43542170575161,0.839423081820392,1.15913756419314,5.06742683718191,2.56412273974171,1.07184189539533,3.51100472824754,0,0,0,0.515559547031063,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,2.38710899443606,1.19707462020309,1.53660245178721,0.729320151204882,0.419226325255965,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,1.32479028120958,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,1.05227884575137,0.679020569229309,0,0.237270036248348,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,1.15933917810211
|short_description=p4@Patz1
}}

Latest revision as of 07:06, 27 September 2015

Short description:p4@Patz1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Patz1_5end
Coexpression cluster:NA
Association with transcript: 1bp_to_ENSMUST00000101644_5end
EntrezGene:Patz1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Patz1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk2.38e-0966
trunk1.29e-0890
kidney4.94e-0814
kidney mesenchyme4.94e-0814
upper urinary tract4.94e-0814
kidney rudiment4.94e-0814
kidney field4.94e-0814
trunk region element5.36e-0879
abdomen element2.49e-0749
abdominal segment element2.49e-0749
abdominal segment of trunk2.49e-0749
abdomen2.49e-0749
compound organ5.34e-0743
urinary system structure5.56e-0718
renal system6.34e-0719
mesenchyme9.62e-0761
entire embryonic mesenchyme9.62e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:3189171..3189197,%2B&oldid=4298403"