FFCP PHASE1:Mm9::chr13:23673432..23673438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122|HGNC=|MCL_coexpression_id=154|UniProt=P62806|association_with_transcript=-28bp_to_ENSMUST00000102968_5end|description=CAGE_peak_1_at_Hist1h4a_5end,CAGE_peak_1_at_Hist1h4b_5end,CAGE_peak_1_at_Hist1h4c_5end,CAGE_peak_1_at_Hist1h4d_5end,CAGE_peak_1_at_Hist1h4f_5end,CAGE_peak_1_at_Hist1h4h_5end,CAGE_peak_1_at_Hist1h4i_5end,CAGE_peak_1_at_Hist1h4j_5end,CAGE_peak_1_at_Hist1h4k_5end,CAGE_peak_1_at_Hist1h4m_5end,CAGE_peak_1_at_Hist1h4n_5end,CAGE_peak_1_at_Hist2h4_5end,CAGE_peak_1_at_Hist4h4_5end|id=chr13:23673432..23673438,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2210.21423889326,959.682371008243,923.193456721369,419.517861082573,646.656387360734,1721.09829564069,1678.50682267885,787.394026346732,235.961898326193,280.64336706007,409.553379995408,274.495999102953,684.118116805098,548.912706788885,8503.29288986842,12598.8210380645,22231.3769250344,1107.74539365545,916.884217521575,3356.92214572242,407.102229953171,4488.05028523122,4932.49681809966,1054.03008136296,1453.53720484159,1974.78372459155,1701.50988482835,1422.32560695955,1439.61742580149,2094.37037830502,2580.27795249578,31305.7421402129,28570.3744480909,27433.1789837724,4861.6616120337,6849.53232735132,5047.27065616203,14536.859130385,23545.5406072247,19409.1192840846,11145.2220037236,15362.3760022004,11795.9595372449,734.98562334142,608.667095041965,543.665479902901,2897.19514812079,2513.17597759741,727.161264851102,851.797387844436,1237.19999432495,1633.02913118608,691.767684776047,530.239725810293,357.267708488439,610.991160585374,625.215965946367,533.204943414875,1330.43304661272,1572.16119039648,1611.19942771271,1344.19625871825,1687.88152301894,895.850168553633,1301.34813313814,1262.52316425922,2195.17000976835,2887.40056449148,2305.02008161746,2637.20599937125,2445.23800067117,1345.98743851072,1218.53174043005,3253.11064555075,3370.31014288526,3234.73091008066,519.746958317115,385.615761017267,421.496327255132,991.257338580137,926.861317336012,1013.1765057329,800.417658136959,895.918075170434,514.777296760073,987.889647093208,852.806367986627,893.22614439484,266.026117179476,854.487630127424,847.273900475004,939.582873663674,90.4361873831308,377.252530954834,346.980606917055,215.500932693818,694.497657551513,1467.91636836481,2647.73895891244,2416.48935007622,2166.59432642468,672.430741651025,135.046777044522,56.8853362522665,4367.70675240124,3566.29346642749,3697.91131528314,510.744493983355,350.084018690976,305.19703791728,3388.3419170694,3145.73732192104,1952.39079976979,1433.22158901489,765.855249574845,467.856719520382,176.991596897812,290.644707409022,4765.39704335397,1381.81243225077,2882.2026574266,4251.38621948963,1384.89078585065,343.139094097533,366.531736923546,1257.35962573669,12285.8428668371,17448.1709309433,11607.6111026703,251.198902281888,298.290393037744,615.957634057261,375.982004575894,335.498680017394,310.227550527423,312.476672668501,1628.00407051116,2786.84054863669,951.501185502785,403.837921446144,3870.69281681155,6107.57930637964,2945.4563193559,3582.70563440845,2201.93325853357,2994.65821165836,2677.99528791705,503.695462828864,3369.32772954032,2122.90485596394,1895.52146061822,2626.4032659472,2195.73912713455,976.150822761633,1370.92059274972,2960.23665039145,14070.9478473826,12461.5577062159,6445.68065679023,1465.62196646121,2139.58124520754,2176.23007481783,1020.84329984343,1646.71985549402,1745.53238232068,1361.02117862414,911.593017955906,835.456024637098,735.911648813085,638.939770195839,245.800630543035,313.598973027338,421.755771474108,396.445761018138,319.430431868909,601.271650132159,364.782336414113,950.964237722105,3918.74502708385,2979.36426329757,1575.53358212391,1200.42033855813,1114.33637770665,1329.67712652679,1069.11397565978,1065.43753810963,1049.07316153233,1237.11134315188,934.462869561943,1265.53772738514,1162.60657027598,804.331602674389,3527.06428612351,3427.68387531708,1833.75485940102,2635.04453099052,2103.60867582007,1104.14821253329,689.910620025647,457.443848588787,421.38458552625,390.798818140342,383.609699450771,4051.49970210391,5019.33049921075,4715.133634598,7116.13019818729,6212.72363522226,8394.50508152985,4368.09045491566,3064.51792127494,4252.13260604382,1417.55451635972,1307.70329010712,824.403532368669,498.843283945546,488.499157020167,319.377611142549,647.559931533949,5186.1904487464,2264.23538268551,4880.51070620821,3684.16751763291,1663.00212388235,1094.28661715301,497.395668389529,1021.0028283758,1395.67047416658,618.206138085077,823.740883076015,686.940857862533,765.627467071941,274.440136769475,389.980375298015,783.380486919325,489.235851198291,235.527715512091,195.157458176018,2088.69513904422,432.230227373887,1974.45043710693,1944.77538534156,1508.82547772052,1396.53365523471,1097.72906720396,1013.41398022402,1620.86204950628,1073.45576610825,802.038901453496,484.873866480507,452.079171388336,2808.09456983261,1383.07317187121,389.989370707074,233.631443478335,5874.80583367824,3500.60446609485,2107.09595103289,1684.69729888481,1038.51592975459,689.228257879646,1277.09399165448,1471.62117797213,699.073308554025,638.836767964493,670.381031113214,451.422917229523,3808.47219985624,3825.39499682362,2261.68439365336,944.336744145107,1411.07571604998,1148.5521638028,2892.11255163958,962.388674769276,301.225204768352,483.177720138422,475.037294724404,762.27355843137,1000.47079870825,1646.38336849126,1184.76901435985,1154.84707472747,209.716016573886,6906.60100184921,3345.53112968384,4464.29927677427,14509.8338746143,10290.7515455219,9051.60842291607,6674.8829674287,5953.11492749144,6086.46504632063,31.5041303944987,2674.93716172208,1633.67191836423,2579.81557086954,1825.34082420631,1693.62004441535,1504.14205522991,792.398680038796,638.946254383016,655.203689990013,434.937519160848,282.973855219464,1818.42023298687,3401.99202228838,1848.64744758686,3145.17086150623,2540.76221513032,2072.05940552943,1386.28608543354,724.787788670513,469.156362644104,205.0773644556,3654.98462118551,5487.77157790474,4941.526860157,5300.50973584808,4022.72985164831,3241.28762190156,5074.17109693501,4996.92746242465,4851.84178580829,4599.91905650245,4658.27057950717,4142.05738932022,3570.32523143099,2523.60607190444,295.202959467005,1498.18319932156,1791.49600263462,1183.75442998312,368.798935007452,597.205636885661,432.054681646478,586.511885160324,530.161713965379,419.045867221863,573.104919451435,513.314380041699,661.806605205541,729.612883555734,668.523599189885,602.120070206771,612.43683638494,641.649651121634,654.4490340543,5661.80738541201,1677.50056777793,3038.37524800057,2304.8947845245,3774.92344576733,2335.54793134898,1421.71231774693,1454.40146904935,1333.41931585399,1510.87662913575,1510.73662734583,1369.42723846291,1289.72448238269,1186.12997345261,1200.17155929649,1122.6242303542,1098.46752563129,1062.54398631409,1329.38911599147,1350.25569439283,1925.21085214411,1804.7514728343,1382.92990169446,1492.70769881401,1372.5853133576,1374.90276363185,1387.14281829423,1653.65620609828,1377.86853908011,1439.3299268021,1362.28591311989,1202.73972980563,1434.76403735293,1288.45477130249,1608.64822897174,1922.29239723249,1125.44496823086,1065.33068597146,597.202172718929,1784.805172096,1762.42741855082|short_description=p1@Hist1h4a,p1@Hist1h4b,p1@Hist1h4c,p1@Hist1h4d,p1@Hist1h4f,p1@Hist1h4h,p1@Hist1h4i,p1@Hist1h4j,p1@Hist1h4k,p1@Hist1h4m,p1@Hist1h4n,p1@Hist2h4,p1@Hist4h4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |||
|HGNC= | |||
|MCL_coexpression_id=154 | |||
|TSSclassifier=NA | |||
|UniProt=P62806 | |||
|association_with_transcript=-28bp_to_ENSMUST00000102968_5end | |||
|cluster_id=chr13:23673432..23673438,+ | |||
|description=CAGE_peak_1_at_Hist1h4a_5end,CAGE_peak_1_at_Hist1h4b_5end,CAGE_peak_1_at_Hist1h4c_5end,CAGE_peak_1_at_Hist1h4d_5end,CAGE_peak_1_at_Hist1h4f_5end,CAGE_peak_1_at_Hist1h4h_5end,CAGE_peak_1_at_Hist1h4i_5end,CAGE_peak_1_at_Hist1h4j_5end,CAGE_peak_1_at_Hist1h4k_5end,CAGE_peak_1_at_Hist1h4m_5end,CAGE_peak_1_at_Hist1h4n_5end,CAGE_peak_1_at_Hist2h4_5end,CAGE_peak_1_at_Hist4h4_5end | |||
|id=chr13:23673432..23673438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2210.21423889326,959.682371008243,923.193456721369,419.517861082573,646.656387360734,1721.09829564069,1678.50682267885,787.394026346732,235.961898326193,280.64336706007,409.553379995408,274.495999102953,684.118116805098,548.912706788885,8503.29288986842,12598.8210380645,22231.3769250344,1107.74539365545,916.884217521575,3356.92214572242,407.102229953171,4488.05028523122,4932.49681809966,1054.03008136296,1453.53720484159,1974.78372459155,1701.50988482835,1422.32560695955,1439.61742580149,2094.37037830502,2580.27795249578,31305.7421402129,28570.3744480909,27433.1789837724,4861.6616120337,6849.53232735132,5047.27065616203,14536.859130385,23545.5406072247,19409.1192840846,11145.2220037236,15362.3760022004,11795.9595372449,734.98562334142,608.667095041965,543.665479902901,2897.19514812079,2513.17597759741,727.161264851102,851.797387844436,1237.19999432495,1633.02913118608,691.767684776047,530.239725810293,357.267708488439,610.991160585374,625.215965946367,533.204943414875,1330.43304661272,1572.16119039648,1611.19942771271,1344.19625871825,1687.88152301894,895.850168553633,1301.34813313814,1262.52316425922,2195.17000976835,2887.40056449148,2305.02008161746,2637.20599937125,2445.23800067117,1345.98743851072,1218.53174043005,3253.11064555075,3370.31014288526,3234.73091008066,519.746958317115,385.615761017267,421.496327255132,991.257338580137,926.861317336012,1013.1765057329,800.417658136959,895.918075170434,514.777296760073,987.889647093208,852.806367986627,893.22614439484,266.026117179476,854.487630127424,847.273900475004,939.582873663674,90.4361873831308,377.252530954834,346.980606917055,215.500932693818,694.497657551513,1467.91636836481,2647.73895891244,2416.48935007622,2166.59432642468,672.430741651025,135.046777044522,56.8853362522665,4367.70675240124,3566.29346642749,3697.91131528314,510.744493983355,350.084018690976,305.19703791728,3388.3419170694,3145.73732192104,1952.39079976979,1433.22158901489,765.855249574845,467.856719520382,176.991596897812,290.644707409022,4765.39704335397,1381.81243225077,2882.2026574266,4251.38621948963,1384.89078585065,343.139094097533,366.531736923546,1257.35962573669,12285.8428668371,17448.1709309433,11607.6111026703,251.198902281888,298.290393037744,615.957634057261,375.982004575894,335.498680017394,310.227550527423,312.476672668501,1628.00407051116,2786.84054863669,951.501185502785,403.837921446144,3870.69281681155,6107.57930637964,2945.4563193559,3582.70563440845,2201.93325853357,2994.65821165836,2677.99528791705,503.695462828864,3369.32772954032,2122.90485596394,1895.52146061822,2626.4032659472,2195.73912713455,976.150822761633,1370.92059274972,2960.23665039145,14070.9478473826,12461.5577062159,6445.68065679023,1465.62196646121,2139.58124520754,2176.23007481783,1020.84329984343,1646.71985549402,1745.53238232068,1361.02117862414,911.593017955906,835.456024637098,735.911648813085,638.939770195839,245.800630543035,313.598973027338,421.755771474108,396.445761018138,319.430431868909,601.271650132159,364.782336414113,950.964237722105,3918.74502708385,2979.36426329757,1575.53358212391,1200.42033855813,1114.33637770665,1329.67712652679,1069.11397565978,1065.43753810963,1049.07316153233,1237.11134315188,934.462869561943,1265.53772738514,1162.60657027598,804.331602674389,3527.06428612351,3427.68387531708,1833.75485940102,2635.04453099052,2103.60867582007,1104.14821253329,689.910620025647,457.443848588787,421.38458552625,390.798818140342,383.609699450771,4051.49970210391,5019.33049921075,4715.133634598,7116.13019818729,6212.72363522226,8394.50508152985,4368.09045491566,3064.51792127494,4252.13260604382,1417.55451635972,1307.70329010712,824.403532368669,498.843283945546,488.499157020167,319.377611142549,647.559931533949,5186.1904487464,2264.23538268551,4880.51070620821,3684.16751763291,1663.00212388235,1094.28661715301,497.395668389529,1021.0028283758,1395.67047416658,618.206138085077,823.740883076015,686.940857862533,765.627467071941,274.440136769475,389.980375298015,783.380486919325,489.235851198291,235.527715512091,195.157458176018,2088.69513904422,432.230227373887,1974.45043710693,1944.77538534156,1508.82547772052,1396.53365523471,1097.72906720396,1013.41398022402,1620.86204950628,1073.45576610825,802.038901453496,484.873866480507,452.079171388336,2808.09456983261,1383.07317187121,389.989370707074,233.631443478335,5874.80583367824,3500.60446609485,2107.09595103289,1684.69729888481,1038.51592975459,689.228257879646,1277.09399165448,1471.62117797213,699.073308554025,638.836767964493,670.381031113214,451.422917229523,3808.47219985624,3825.39499682362,2261.68439365336,944.336744145107,1411.07571604998,1148.5521638028,2892.11255163958,962.388674769276,301.225204768352,483.177720138422,475.037294724404,762.27355843137,1000.47079870825,1646.38336849126,1184.76901435985,1154.84707472747,209.716016573886,6906.60100184921,3345.53112968384,4464.29927677427,14509.8338746143,10290.7515455219,9051.60842291607,6674.8829674287,5953.11492749144,6086.46504632063,31.5041303944987,2674.93716172208,1633.67191836423,2579.81557086954,1825.34082420631,1693.62004441535,1504.14205522991,792.398680038796,638.946254383016,655.203689990013,434.937519160848,282.973855219464,1818.42023298687,3401.99202228838,1848.64744758686,3145.17086150623,2540.76221513032,2072.05940552943,1386.28608543354,724.787788670513,469.156362644104,205.0773644556,3654.98462118551,5487.77157790474,4941.526860157,5300.50973584808,4022.72985164831,3241.28762190156,5074.17109693501,4996.92746242465,4851.84178580829,4599.91905650245,4658.27057950717,4142.05738932022,3570.32523143099,2523.60607190444,295.202959467005,1498.18319932156,1791.49600263462,1183.75442998312,368.798935007452,597.205636885661,432.054681646478,586.511885160324,530.161713965379,419.045867221863,573.104919451435,513.314380041699,661.806605205541,729.612883555734,668.523599189885,602.120070206771,612.43683638494,641.649651121634,654.4490340543,5661.80738541201,1677.50056777793,3038.37524800057,2304.8947845245,3774.92344576733,2335.54793134898,1421.71231774693,1454.40146904935,1333.41931585399,1510.87662913575,1510.73662734583,1369.42723846291,1289.72448238269,1186.12997345261,1200.17155929649,1122.6242303542,1098.46752563129,1062.54398631409,1329.38911599147,1350.25569439283,1925.21085214411,1804.7514728343,1382.92990169446,1492.70769881401,1372.5853133576,1374.90276363185,1387.14281829423,1653.65620609828,1377.86853908011,1439.3299268021,1362.28591311989,1202.73972980563,1434.76403735293,1288.45477130249,1608.64822897174,1922.29239723249,1125.44496823086,1065.33068597146,597.202172718929,1784.805172096,1762.42741855082 | |||
|short_description=p1@Hist1h4a,p1@Hist1h4b,p1@Hist1h4c,p1@Hist1h4d,p1@Hist1h4f,p1@Hist1h4h,p1@Hist1h4i,p1@Hist1h4j,p1@Hist1h4k,p1@Hist1h4m,p1@Hist1h4n,p1@Hist2h4,p1@Hist4h4 | |||
}} |
Latest revision as of 07:08, 27 September 2015
Short description: | p1@Hist1h4a, p1@Hist1h4b, p1@Hist1h4c, p1@Hist1h4d, p1@Hist1h4f, p1@Hist1h4h, p1@Hist1h4i, p1@Hist1h4j, p1@Hist1h4k, p1@Hist1h4m, p1@Hist1h4n, p1@Hist2h4, p1@Hist4h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hist1h4a_5end, CAGE_peak_1_at_Hist1h4b_5end, CAGE_peak_1_at_Hist1h4c_5end, CAGE_peak_1_at_Hist1h4d_5end, CAGE_peak_1_at_Hist1h4f_5end, CAGE_peak_1_at_Hist1h4h_5end, CAGE_peak_1_at_Hist1h4i_5end, CAGE_peak_1_at_Hist1h4j_5end, CAGE_peak_1_at_Hist1h4k_5end, CAGE_peak_1_at_Hist1h4m_5end, CAGE_peak_1_at_Hist1h4n_5end, CAGE_peak_1_at_Hist2h4_5end, CAGE_peak_1_at_Hist4h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | -28bp_to_ENSMUST00000102968_5end |
EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data