FFCP PHASE1:Mm9::chr3:108714588..108714602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66921 | |EntrezGene=66921 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENSMUST00000129273_5end | |association_with_transcript=11bp_to_ENSMUST00000129273_5end | ||
|cluster_id=chr3:108714588..108714602,- | |||
|description=CAGE_peak_2_at_Prpf38b_5end | |description=CAGE_peak_2_at_Prpf38b_5end | ||
|id=chr3:108714588..108714602,- | |id=chr3:108714588..108714602,- | ||
|ontology_enrichment_celltype=CL:0000988!6.64e-09!32;CL:0002032!6.64e-09!32;CL:0000037!6.64e-09!32;CL:0000566!6.64e-09!32;CL:0000837!6.64e-09!32;CL:0000542!1.64e-07!13;CL:0000051!1.64e-07!13;CL:0000838!2.70e-07!12 | |ontology_enrichment_celltype=CL:0000988!6.64e-09!32;CL:0002032!6.64e-09!32;CL:0000037!6.64e-09!32;CL:0000566!6.64e-09!32;CL:0000837!6.64e-09!32;CL:0000542!1.64e-07!13;CL:0000051!1.64e-07!13;CL:0000838!2.70e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.37e-09,32;CL:0002032,5.37e-09,32;CL:0000037,5.37e-09,32;CL:0000837,5.37e-09,32;CL:0000542,1.60e-07,13;CL:0000051,1.60e-07,13;CL:0000838,2.64e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-08!45;UBERON:0003061!2.10e-08!45;UBERON:0002193!8.48e-08!48;UBERON:0004177!8.71e-08!29;UBERON:0002370!9.43e-07!23;UBERON:0000974!9.43e-07!23;UBERON:0004807!9.43e-07!23;UBERON:0005058!9.43e-07!23;UBERON:0003351!9.43e-07!23;UBERON:0009113!9.43e-07!23;UBERON:0003295!9.43e-07!23;UBERON:0009722!9.43e-07!23;UBERON:0005562!9.43e-07!23;UBERON:0007690!9.43e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.71e-08,45;UBERON:0003061,1.71e-08,45;UBERON:0004177,5.96e-08,29;UBERON:0005057,5.96e-08,29;UBERON:0002193,7.07e-08,48;UBERON:0002405,7.07e-08,48;UBERON:0000077,8.65e-08,35;UBERON:0002370,6.42e-07,23;UBERON:0000974,6.42e-07,23;UBERON:0004807,6.42e-07,23;UBERON:0005058,6.42e-07,23;UBERON:0003351,6.42e-07,23;UBERON:0009113,6.42e-07,23;UBERON:0003295,6.42e-07,23;UBERON:0009722,6.42e-07,23;UBERON:0005562,6.42e-07,23;UBERON:0007690,6.42e-07,23 | |||
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|phase1_expression=3.52327463630547,2.79180326111489,2.27499619694768,3.93203474698879,1.50268718983904,1.51091344720701,4.67225281191051,5.93967287831251,19.1472662126267,7.95819389494778,9.93064215707929,2.87179772383211,12.497653284978,6.90621179110079,3.99731714178795,4.04950534779652,2.79824751251259,11.0411757875383,8.91243818437302,10.6097412949508,1.36069264241712,5.26242041364692,3.39559725880616,0.639969691173627,1.60586496747019,2.29692785646008,2.15380998079537,0.861884930743556,1.33016393619462,0.504060259519861,1.33038306393183,5.08024538767705,1.84519436275371,0,2.02196133825892,2.82598897109437,2.45003227514843,7.95210098400125,8.5946887897618,3.14114246384279,6.47054636834116,5.46436387966757,3.88408282424923,0.881277725829041,1.01376931219515,0.550640256485045,0,0,0.659058548203415,0.972149495371417,1.39986421625363,1.43752564364972,12.080347636157,19.5847778343063,9.07453257684653,2.82985379639542,3.72493471920384,3.09403255366465,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0.899899717281399,1.97773272513395,2.8419204597844,1.49800055259202,1.92109152660777,0.933206510776299,0.540023753326763,0.841299845405528,2.28520787523043,1.54607978666129,0.979926393719632,0.862609239164127,0.919218786610021,1.10115880999389,1.0214987046815,0.768032666281217,1.58263545276233,1.9212405156506,1.04182674111352,2.51264699101243,1.68828783009504,1.22238598221448,2.65165726926301,1.70846016958924,2.23679334990361,2.19605960666234,1.88928900266964,7.53647670624362,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,0.702222100658759,1.02258193546835,0.259786004602869,1.06001872353102,3.80277233397037,2.56652954828636,0,0,1.5154372870785,4.30711771307668,0.505524445014783,2.2836775943812,12.4290184150642,1.7813056687779,1.56136794089522,2.43572382649713,2.30615497256059,1.50722640552623,2.23418543557839,2.01066546127481,5.6854842578906,4.04878199375753,3.5384422077995,2.42650274921114,1.98757366614354,2.90925151881133,1.86391761218122,2.34224637609238,3.14170060220183,3.57639877292028,8.02761334189666,9.59844369589452,5.84523044536098,1.04853447583376,0,0.502617408451458,1.39059456153821,2.04572365864264,1.24672826735736,0.648965052271031,1.62942982160506,3.73220911830279,2.52722758433675,4.20883711772948,3.6433724029557,1.83921683546778,2.70093194708024,3.16480117455002,3.06164246180975,3.33095672740609,2.06143794031403,2.58703370739016,1.94011193639558,4.16033376369202,3.16712023495108,3.28793598641362,4.17070873838397,3.48252166522167,2.88094990971121,2.7864797354589,6.31991868581911,7.20574139921202,8.24074148247219,2.27838349789052,4.45599513964083,2.88099298337624,1.42046841351126,1.96764231747404,2.31400669331067,3.0229412817553,1.3413670069981,3.03589890154641,2.13927804887525,2.46251196118643,0.972825714550269,0.877199924551994,1.3173006917463,1.74468344388483,0.420579897128254,1.64647379806855,2.31293148088659,2.90895623329899,3.83918850963421,3.48355007790658,3.47942145569652,4.03367049246685,2.2237804384487,1.90225626112559,3.32170343081158,2.63518327558417,2.26201687920243,3.38226002469956,3.50935356814416,2.69645822596266,2.37751854862164,1.59313018603494,1.32767530667157,2.51346727741403,3.38123207019241,2.8511185898344,2.13347735884388,2.73529697572242,3.16182685621286,2.21415221969403,2.04098346193787,1.85095745882701,2.96452627087149,3.00321190288969,2.16214894624523,1.34917267430912,1.42002084971952,2.65294875727659,2.29163266603278,2.01387296215567,2.59416362840057,1.09824565275233,7.18841032636773,2.97712758134803,1.24815069245824,1.76805214562978,1.97337154874103,2.41221760681684,3.51031061316549,2.4633883530163,3.91115943460862,3.22515662972857,4.22442446919304,3.1826188913945,1.6663054862021,6.63454402716516,3.15270288212382,2.6575762757853,4.9430978283821,4.42430949732493,1.89953480052485,3.47157740595628,1.50791283939272,2.17562273527484,3.93411418415229,3.58717770196152,0.642202359951168,1.64096361229084,1.96721934452011,1.51482556322624,3.15508219416257,1.56175497718655,3.66219776145758,2.62865677747807,3.7875774594007,1.69845918473299,2.42886421004937,2.33804686329049,3.16230222357219,1.28528526568723,3.83238230062325,2.31485284767432,2.60619134965722,5.27904393512113,7.96470830039777,2.42780636154981,3.93020624054176,3.01768127609437,0.590603785761546,1.53717573971964,6.97756391554197,3.99887102425256,2.13898427030833,3.79244109522979,3.16255825724996,4.12542172992747,2.38307724027652,3.42116078659489,1.55230420539305,2.35770738534752,3.54680467284547,2.14042581122485,3.1264313914403,2.13125464380219,2.58138878870081,2.54198485036584,2.20528398054962,6.43056386471772,4.35953952078945,3.43783672090488,3.22305328808468,4.10352249362653,4.37221254944776,0.556275906031529,4.78438466233988,3.30218988741156,4.07427960213366,3.20226376907975,5.19438065339896,2.28778173206523,5.09935289981566,7.13752406850656,5.94259887359022,0.954670618015114,2.68885594543965,4.06638934253697,2.91614420218863,3.13632444021703,2.83871332870031,2.4275582349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| ||
|short_description=p2@Prpf38b | |short_description=p2@Prpf38b | ||
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Latest revision as of 07:50, 27 September 2015
Short description: | p2@Prpf38b |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prpf38b_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENSMUST00000129273_5end |
EntrezGene: | Prpf38b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.37e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.37e-09 | 32 |
hematopoietic stem cell | 5.37e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.37e-09 | 32 |
lymphocyte | 1.60e-07 | 13 |
common lymphoid progenitor | 1.60e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.71e-08 | 45 |
blood island | 1.71e-08 | 45 |
hemopoietic organ | 5.96e-08 | 29 |
immune organ | 5.96e-08 | 29 |
hemolymphoid system | 7.07e-08 | 48 |
immune system | 7.07e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 8.65e-08 | 35 |
thymus | 6.42e-07 | 23 |
neck | 6.42e-07 | 23 |
respiratory system epithelium | 6.42e-07 | 23 |
hemolymphoid system gland | 6.42e-07 | 23 |
pharyngeal epithelium | 6.42e-07 | 23 |
thymic region | 6.42e-07 | 23 |
pharyngeal gland | 6.42e-07 | 23 |
entire pharyngeal arch endoderm | 6.42e-07 | 23 |
thymus primordium | 6.42e-07 | 23 |
early pharyngeal endoderm | 6.42e-07 | 23 |