FFCP PHASE1:Mm9::chr15:97536218..97536273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71919 | |EntrezGene=71919 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D706 | |UniProt=Q9D706 | ||
|association_with_transcript=0bp_to_ENSMUST00000023104,NM_028003,uc007xkv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000023104,NM_028003,uc007xkv.1_5end | ||
|cluster_id=chr15:97536218..97536273,- | |||
|description=CAGE_peak_1_at_Rpap3_5end | |description=CAGE_peak_1_at_Rpap3_5end | ||
|id=chr15:97536218..97536273,- | |id=chr15:97536218..97536273,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.02e-12!86;UBERON:0000153!1.38e-11!94;UBERON:0000033!2.37e-08!63;UBERON:0003056!2.61e-08!49;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0002616!2.55e-07!49;UBERON:0001049!4.17e-07!52;UBERON:0005068!4.17e-07!52;UBERON:0006241!4.17e-07!52;UBERON:0007135!4.17e-07!52;UBERON:0003080!6.05e-07!40;UBERON:0000475!7.68e-07!200 | |ontology_enrichment_uberon=UBERON:0007811!4.02e-12!86;UBERON:0000153!1.38e-11!94;UBERON:0000033!2.37e-08!63;UBERON:0003056!2.61e-08!49;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0002616!2.55e-07!49;UBERON:0001049!4.17e-07!52;UBERON:0005068!4.17e-07!52;UBERON:0006241!4.17e-07!52;UBERON:0007135!4.17e-07!52;UBERON:0003080!6.05e-07!40;UBERON:0000475!7.68e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.66e-08,73;UBERON:0003056,2.61e-08,49;UBERON:0002346,3.80e-08,64;UBERON:0003075,3.80e-08,64;UBERON:0007284,3.80e-08,64;UBERON:0010314,1.11e-07,92;UBERON:0000073,3.47e-07,54;UBERON:0001049,4.17e-07,52;UBERON:0005068,4.17e-07,52;UBERON:0006241,4.17e-07,52;UBERON:0007135,4.17e-07,52;UBERON:0000955,4.63e-07,47;UBERON:0006238,4.63e-07,47;UBERON:0003080,6.05e-07,40;UBERON:0002616,8.03e-07,46 | |||
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| |phase1_expression=18.7374151112609,2.44282785347553,2.72999543633722,4.83942738090928,3.00537437967808,10.2406355866253,10.2789561862031,16.0112921067555,6.89864738543167,6.55380673701582,25.5114772656002,29.0370658743025,11.1280474455284,12.8507991555926,16.6554880907831,16.4004966585759,10.4934281719222,16.8772258466657,17.1393042007173,9.76096199135469,16.1582251287033,16.3830069481461,15.9331871374751,6.55968933452967,6.8822784320151,3.44539178469012,4.30761996159075,5.817723282519,7.79096019771133,7.30887376303799,5.54326276638262,6.35030673459631,4.92051830067656,0,13.8648777480612,10.6390173029435,15.5168710759401,0.837063261473815,6.2506827561904,4.18818995179039,1.17646297606203,3.41522742479223,4.36959317728038,27.4455063186758,27.3717714292689,26.6142790634438,1.56478268869608,4.79655344036982,5.71184075109627,4.27745777963423,6.43937539476668,10.062679505548,10.5703041816374,16.6833292662609,10.7550015725588,11.3194151855817,9.74213695791773,4.64104883049698,14.7691016427506,14.8117474196169,15.8457850876545,4.06613438482959,2.66788438833342,3.1496490104849,2.96659908770092,4.2628806896766,3.29560121570245,4.2264013585371,18.8715094401429,14.5806413398226,18.2982716375702,13.139945282575,13.693849539,18.4961106814581,19.9358579717932,20.2228133054205,16.5173821499083,24.0052195600153,22.4265538554115,16.8814448294648,18.3890163640843,22.3992749339407,25.4056529091257,18.5711661310454,20.3221669543157,21.5078867395777,23.9184423742493,17.8943467992289,12.1161909333094,14.81202578093,15.9425468785923,7.74381489283248,8.15965600449301,5.93673510801599,9.74664626171504,16.1289679355041,18.3982190372595,22.3263722577256,23.3807404142582,18.726997449048,10.8449433228044,24.3820307087204,63.7013099266614,99.5493384414664,14.9378818297738,17.2284708523067,14.6602089054287,12.2176751299394,16.572024553419,17.9614988268438,16.8280766963152,13.7009465240464,11.3001593655469,15.976599898578,19.6373140916627,18.8499886994513,7.16865406429684,14.749134405831,10.6153266233985,16.985519244478,13.0296495891632,17.9403843660032,9.31958806090611,19.9090941967852,20.5257772677186,8.17462576667492,17.972268675888,17.3971791988088,17.1544806548637,27.5614776504874,26.5350349634803,33.5497120141348,23.292458905765,26.0829766476937,20.1554403222773,21.9025705141473,25.76535905413,14.9288364732112,20.7232661915613,19.3606507415556,21.7301139747715,13.5642241615749,17.4660265911189,21.0986744970001,22.1118622241816,23.5729245324124,21.3639931996182,25.6116337031625,21.3412313003514,15.5066985737612,19.5305747821983,13.1517439456545,20.019401944243,16.0195996600197,13.9931852757402,23.4860434845822,26.6841011179029,24.7053990830127,19.3231179589003,16.3629360303046,20.8728193383176,20.3470129450947,17.0456209621351,18.2990735525086,16.0437797402873,22.0907247512887,17.7060444923749,20.4339349142547,24.8485373369356,16.2525789438304,20.5104088151015,20.4679982395465,23.0527621055603,19.0573114639728,18.7158054222073,30.9742883261646,5.61711931072457,8.46241813323342,22.6085545567348,22.9914305141834,18.0414445850931,14.117846723634,10.6741461045538,10.8428606884159,8.0669940462567,9.88193728344065,10.0534083520108,14.3248659869629,11.5028811400281,14.3811105384675,9.94235029423593,8.56307474993779,15.1734320762465,23.5351935976041,23.6686244913469,26.2710212920455,20.752916126936,24.1968578621599,20.0459822683896,20.3702004211851,21.1948282585856,17.7691916047393,8.89357881261447,15.8502850430289,17.6903095601883,13.0420025183215,16.6345299538572,14.470629585145,7.89340140522401,14.0971107350897,14.2678999562031,6.58947391651396,10.0637744569148,9.30352369171258,11.2333562321242,13.639259409144,16.6839594575378,9.16642690590398,14.041242452662,19.3281240005894,18.578007314391,23.0853316654256,23.7037150771387,17.0856382590652,13.5684875305028,13.0739544064725,20.1772984455924,21.9250042752287,20.0913008508434,18.0249646187312,19.3407179689803,13.7416605652436,9.04747703635634,4.89515115436839,9.34352118736169,13.7968373152366,28.578005017827,28.3652281553132,14.2623402477708,17.4204939771017,14.5133780931478,18.7410597262386,15.9413314322271,15.5329718669159,12.9223230967789,16.7015153165411,15.382806663646,12.5670018901864,12.2539211163422,21.8498495166829,16.0392296285344,16.3820355373875,23.6186091062685,15.6721616823909,5.30980553359851,19.9080121647085,14.8138542912728,16.7858520982749,11.2214719294694,10.4527950300935,12.4045580720746,11.6330793432802,14.6163925137736,14.5376908650475,7.37930260024991,11.3449097573006,21.7881347682424,24.3082476942269,13.0652270620582,14.3605813471167,18.4433842987965,17.1234064897988,18.4294903074375,17.6589670486468,11.9682571112492,9.32061111800809,14.5548742716275,30.5039567941738,19.0528023501169,21.9539046738487,23.1582347366085,24.2928531622691,11.0762717919343,27.2575193955449,12.3027034174454,20.6386867963223,19.26023084645,17.5182665014363,22.0077706630851,19.2173665493479,15.9779724194224,13.8551937800421,13.5435974328335,14.3200592702267,20.8781755763549,18.7053909756701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| ||
|short_description=p1@Rpap3 | |short_description=p1@Rpap3 | ||
}} | }} |
Latest revision as of 12:16, 1 October 2015
Short description: | p1@Rpap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000023104, NM_028003, uc007xkv.1_5end |
EntrezGene: | Rpap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.66e-08 | 73 |
pre-chordal neural plate | 2.61e-08 | 49 |
neurectoderm | 3.80e-08 | 64 |
neural plate | 3.80e-08 | 64 |
presumptive neural plate | 3.80e-08 | 64 |
structure with developmental contribution from neural crest | 1.11e-07 | 92 |
regional part of nervous system | 3.47e-07 | 54 |
neural tube | 4.17e-07 | 52 |
neural rod | 4.17e-07 | 52 |
future spinal cord | 4.17e-07 | 52 |
neural keel | 4.17e-07 | 52 |
brain | 4.63e-07 | 47 |
future brain | 4.63e-07 | 47 |
anterior neural tube | 6.05e-07 | 40 |
regional part of brain | 8.03e-07 | 46 |