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FFCP PHASE1:Mm9::chr5:104183219..104183236,+: Difference between revisions

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{{FFCP|EntrezGene=17355|HGNC=|UniProt=A3KMF4,Q3UP77,Q3UQD9|association_with_transcript=38bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end|description=CAGE_peak_2_at_Aff1_5end|id=chr5:104183219..104183236,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!8.89e-12!128;UBERON:0001555!8.89e-12!128;UBERON:0007026!8.89e-12!128;UBERON:0004921!1.23e-11!126;UBERON:0004185!1.23e-11!126;UBERON:0005057!1.49e-11!51;UBERON:0003929!1.85e-11!55;UBERON:0004119!1.86e-11!130;UBERON:0000925!1.86e-11!130;UBERON:0006595!1.86e-11!130;UBERON:0005911!9.07e-11!69;UBERON:0002405!1.15e-10!70;UBERON:0000490!6.16e-10!66;UBERON:0003104!3.89e-09!131;UBERON:0009142!3.89e-09!131;UBERON:0005172!9.05e-08!49;UBERON:0005173!9.05e-08!49;UBERON:0002417!9.05e-08!49;UBERON:0000916!9.05e-08!49;UBERON:0000077!1.29e-07!97;UBERON:0001041!1.77e-07!92;UBERON:0009854!2.83e-07!23;UBERON:0009856!2.83e-07!23;UBERON:0002107!6.87e-07!22;UBERON:0007499!6.87e-07!22;UBERON:0006925!6.87e-07!22;UBERON:0009497!6.87e-07!22;UBERON:0000015!6.87e-07!22;UBERON:0002423!6.87e-07!22;UBERON:0006235!6.87e-07!22;UBERON:0008835!6.87e-07!22;UBERON:0003894!6.87e-07!22;UBERON:0004161!6.87e-07!22;UBERON:0008836!6.87e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.12e-12,116;UBERON:0001555,8.12e-12,116;UBERON:0007026,8.12e-12,116;UBERON:0004921,1.09e-11,114;UBERON:0003929,1.73e-11,55;UBERON:0004119,1.81e-11,118;UBERON:0000925,1.81e-11,118;UBERON:0006595,1.81e-11,118;UBERON:0005911,9.50e-11,69;UBERON:0000490,5.81e-10,66;UBERON:0005172,9.85e-08,49;UBERON:0005173,9.85e-08,49;UBERON:0002417,9.85e-08,49;UBERON:0000916,9.85e-08,49;UBERON:0001041,1.15e-07,80;UBERON:0009854,2.81e-07,23;UBERON:0009856,2.81e-07,23;UBERON:0002107,6.81e-07,22;UBERON:0007499,6.81e-07,22;UBERON:0006925,6.81e-07,22;UBERON:0009497,6.81e-07,22;UBERON:0000015,6.81e-07,22;UBERON:0002423,6.81e-07,22;UBERON:0006235,6.81e-07,22;UBERON:0008835,6.81e-07,22;UBERON:0003894,6.81e-07,22;UBERON:0004161,6.81e-07,22;UBERON:0008836,6.81e-07,22|phase1_expression=2.08193501236232,22.3344260889191,17.7449703361919,32.3636706098308,28.0501608769954,6.21153306073992,4.67225281191051,6.58528949552039,15.0643932702283,13.8098070529976,1.19852577757853,0.558405112967355,6.84802919724823,4.63328132820686,19.3203661853084,26.726735295457,34.9780939064073,11.8298312009339,10.4206969540361,10.1853516431527,7.90902598404949,3.47518329203099,3.39559725880616,7.1996590257033,6.19405058881359,18.9496548157957,7.32295393470427,10.7735616342945,8.17100703662408,9.07308467135751,4.8780712344167,2.54012269383853,0.61506478758457,0,7.79899373328441,4.15586613396231,7.75843553797003,25.9489611056883,14.0640362014284,21.4644735029257,26.4704169613956,29.3709558532132,23.7900072985265,3.14742044938943,3.24406179902447,2.0190142737785,15.6478268869608,1.96222640742402,3.95435128922049,6.22175677037707,12.4587915246573,1.43752564364972,35.2343472721246,33.3666585325218,29.9123481236793,6.17422646486273,5.44413535883638,4.12537673821954,0.606949382578793,0,0.633831403506179,5.76035704517525,6.22506357277798,2.6996991518442,5.93319817540185,4.9733608046227,3.59520132622086,5.76327457982332,0.622137673850866,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.244981598429908,0.575072826109418,0,3.30347642998166,0.893811366596314,0.921639199537461,0.263772575460388,0.823388792421687,1.04182674111352,1.11673199600552,0.56276261003168,1.98637722109853,1.47314292736834,0.854230084794618,0.559198337475902,9.76867893998074,8.91744409260069,32.1749582458862,10.3250865237766,9.51959867190851,7.55584468292944,20.7928453583254,10.3046184032387,8.00533194750986,1.53387290320252,1.81850203222008,1.7666978725517,2.11265129665021,3.84979432242953,28.028576367731,7.11066703153331,4.11332977921307,2.53359865475099,2.02209778005913,11.8751234907822,20.4560928081266,7.86743337043571,0.867426633830679,1.82679286987285,2.99800146432876,3.61734337326294,5.05631440683531,3.01599819191221,4.94389935468748,8.96516012903452,25.6537060065464,5.3383060482645,17.8881629952919,21.3345111379498,16.775258509631,4.09893115816166,2.72280718857492,14.3055950916811,7.0690923458493,7.19883277192089,5.71816021828791,2.54644086988199,1.83000241127451,0.251308704225729,1.21677024134594,1.53429274398198,0.83115217823824,2.75810147215188,4.27725328171328,14.680022531991,11.8779696463827,29.0409761123334,7.41686524887411,4.59804208866946,9.00310649026746,7.9873553452929,12.5187158438443,13.5800543501941,15.2733811032358,36.9945820156792,2.37124792226126,2.45837904218165,1.75951124163949,0.657587197282725,2.50242524303038,2.089512999133,2.88094990971121,0.796137067273973,0.702213187313235,3.08817488537658,3.12579849335152,3.93538967817454,2.57978665979206,2.52086886045421,2.13070262026689,2.75469924446365,4.16521204795921,4.88321283975857,6.43856163359086,7.58974725386602,6.58239399653922,8.20837320395476,10.9442892886905,11.5497990066013,5.488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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17355
|HGNC=
|TSSclassifier=NA
|UniProt=A3KMF4,Q3UP77,Q3UQD9
|association_with_transcript=38bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end
|cluster_id=chr5:104183219..104183236,+
|description=CAGE_peak_2_at_Aff1_5end
|id=chr5:104183219..104183236,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!8.89e-12!128;UBERON:0001555!8.89e-12!128;UBERON:0007026!8.89e-12!128;UBERON:0004921!1.23e-11!126;UBERON:0004185!1.23e-11!126;UBERON:0005057!1.49e-11!51;UBERON:0003929!1.85e-11!55;UBERON:0004119!1.86e-11!130;UBERON:0000925!1.86e-11!130;UBERON:0006595!1.86e-11!130;UBERON:0005911!9.07e-11!69;UBERON:0002405!1.15e-10!70;UBERON:0000490!6.16e-10!66;UBERON:0003104!3.89e-09!131;UBERON:0009142!3.89e-09!131;UBERON:0005172!9.05e-08!49;UBERON:0005173!9.05e-08!49;UBERON:0002417!9.05e-08!49;UBERON:0000916!9.05e-08!49;UBERON:0000077!1.29e-07!97;UBERON:0001041!1.77e-07!92;UBERON:0009854!2.83e-07!23;UBERON:0009856!2.83e-07!23;UBERON:0002107!6.87e-07!22;UBERON:0007499!6.87e-07!22;UBERON:0006925!6.87e-07!22;UBERON:0009497!6.87e-07!22;UBERON:0000015!6.87e-07!22;UBERON:0002423!6.87e-07!22;UBERON:0006235!6.87e-07!22;UBERON:0008835!6.87e-07!22;UBERON:0003894!6.87e-07!22;UBERON:0004161!6.87e-07!22;UBERON:0008836!6.87e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.12e-12,116;UBERON:0001555,8.12e-12,116;UBERON:0007026,8.12e-12,116;UBERON:0004921,1.09e-11,114;UBERON:0003929,1.73e-11,55;UBERON:0004119,1.81e-11,118;UBERON:0000925,1.81e-11,118;UBERON:0006595,1.81e-11,118;UBERON:0005911,9.50e-11,69;UBERON:0000490,5.81e-10,66;UBERON:0005172,9.85e-08,49;UBERON:0005173,9.85e-08,49;UBERON:0002417,9.85e-08,49;UBERON:0000916,9.85e-08,49;UBERON:0001041,1.15e-07,80;UBERON:0009854,2.81e-07,23;UBERON:0009856,2.81e-07,23;UBERON:0002107,6.81e-07,22;UBERON:0007499,6.81e-07,22;UBERON:0006925,6.81e-07,22;UBERON:0009497,6.81e-07,22;UBERON:0000015,6.81e-07,22;UBERON:0002423,6.81e-07,22;UBERON:0006235,6.81e-07,22;UBERON:0008835,6.81e-07,22;UBERON:0003894,6.81e-07,22;UBERON:0004161,6.81e-07,22;UBERON:0008836,6.81e-07,22
|phase1_expression=2.08193501236232,22.3344260889191,17.7449703361919,32.3636706098308,28.0501608769954,6.21153306073992,4.67225281191051,6.58528949552039,15.0643932702283,13.8098070529976,1.19852577757853,0.558405112967355,6.84802919724823,4.63328132820686,19.3203661853084,26.726735295457,34.9780939064073,11.8298312009339,10.4206969540361,10.1853516431527,7.90902598404949,3.47518329203099,3.39559725880616,7.1996590257033,6.19405058881359,18.9496548157957,7.32295393470427,10.7735616342945,8.17100703662408,9.07308467135751,4.8780712344167,2.54012269383853,0.61506478758457,0,7.79899373328441,4.15586613396231,7.75843553797003,25.9489611056883,14.0640362014284,21.4644735029257,26.4704169613956,29.3709558532132,23.7900072985265,3.14742044938943,3.24406179902447,2.0190142737785,15.6478268869608,1.96222640742402,3.95435128922049,6.22175677037707,12.4587915246573,1.43752564364972,35.2343472721246,33.3666585325218,29.9123481236793,6.17422646486273,5.44413535883638,4.12537673821954,0.606949382578793,0,0.633831403506179,5.76035704517525,6.22506357277798,2.6996991518442,5.93319817540185,4.9733608046227,3.59520132622086,5.76327457982332,0.622137673850866,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.244981598429908,0.575072826109418,0,3.30347642998166,0.893811366596314,0.921639199537461,0.263772575460388,0.823388792421687,1.04182674111352,1.11673199600552,0.56276261003168,1.98637722109853,1.47314292736834,0.854230084794618,0.559198337475902,9.76867893998074,8.91744409260069,32.1749582458862,10.3250865237766,9.51959867190851,7.55584468292944,20.7928453583254,10.3046184032387,8.00533194750986,1.53387290320252,1.81850203222008,1.7666978725517,2.11265129665021,3.84979432242953,28.028576367731,7.11066703153331,4.11332977921307,2.53359865475099,2.02209778005913,11.8751234907822,20.4560928081266,7.86743337043571,0.867426633830679,1.82679286987285,2.99800146432876,3.61734337326294,5.05631440683531,3.01599819191221,4.94389935468748,8.96516012903452,25.6537060065464,5.3383060482645,17.8881629952919,21.3345111379498,16.775258509631,4.09893115816166,2.72280718857492,14.3055950916811,7.0690923458493,7.19883277192089,5.71816021828791,2.54644086988199,1.83000241127451,0.251308704225729,1.21677024134594,1.53429274398198,0.83115217823824,2.75810147215188,4.27725328171328,14.680022531991,11.8779696463827,29.0409761123334,7.41686524887411,4.59804208866946,9.00310649026746,7.9873553452929,12.5187158438443,13.5800543501941,15.2733811032358,36.9945820156792,2.37124792226126,2.45837904218165,1.75951124163949,0.657587197282725,2.50242524303038,2.089512999133,2.88094990971121,0.796137067273973,0.702213187313235,3.08817488537658,3.12579849335152,3.93538967817454,2.57978665979206,2.52086886045421,2.13070262026689,2.75469924446365,4.16521204795921,4.88321283975857,6.43856163359086,7.58974725386602,6.58239399653922,8.20837320395476,10.9442892886905,11.5497990066013,5.48875288227627,9.39444931322602,0.630869845692382,1.23485534855141,44.2761169198289,16.6603856998033,0.853153002140936,2.09013004674395,1.41754207454303,2.62188582010345,5.55945109612176,4.1849637744763,11.8632265386128,5.59976446061637,8.29406189040889,8.55512829776949,9.35827618171777,19.7740269903929,14.0489732418551,15.9313018603494,2.84501851429623,4.34144347916969,3.38123207019241,9.16430975303914,9.11576689687841,17.393683332799,14.1017477787094,18.8940989413891,19.3108435244891,18.6329717521919,7.41131567717872,14.5155241973002,13.9556886530374,20.2375901146368,22.1117532313468,17.6059326619264,20.3700681425136,19.8510334841059,11.1873306474774,7.13859674289012,18.6898668485561,10.0478055870496,5.30464044294753,14.6495749209325,6.27890947326693,9.16642690590398,15.1497615936616,0.568474235311454,0.977789858652155,1.86719594352707,1.87752198630802,7.53778158488171,7.14130922658041,13.6593553500459,8.35466263762812,6.2010113101657,11.4807433433391,10.9788420859544,9.67035898449015,12.2951699794285,3.01582567878545,2.71952841909355,3.44234991113325,4.96686143348518,4.65596710964597,1.64096361229084,3.60656879828686,9.84636616097055,1.57754109708128,1.56175497718655,4.09304455692318,4.77937595905104,4.01037613348309,5.66153061577665,2.02405350837447,3.21481443702443,4.74345333535828,4.17717711348349,9.22610553853746,3.38324646967785,4.39794790254655,8.90838664051691,9.2921596837974,1.45668381692989,4.23252979750651,3.39489143560617,4.72483028609236,5.53383266299069,6.97756391554197,9.81541069589265,7.12994756769443,9.7971394960103,5.27093042874994,7.21948802737308,6.80879211507576,3.78128297465751,1.94038025674132,1.50035924522115,2.6601035046341,2.85390108163313,3.78462747384878,3.04464949114599,5.39744928546534,2.96564899209348,14.3343458735725,11.0473789470792,7.91175690809937,3.92034012033013,4.17803204010978,3.44695889464629,15.4484843413821,3.8939313422207,21.7006018613273,5.57244543500701,8.70414278637645,23.9227940395958,28.4323993659732,21.2763701082066,13.0883391095269,13.4353394230712,13.9581973542468,6.68269432610579,0.632671987162271,3.04979200690273,1.62008011232702,1.46361807210128,1.9652630737156,3.64133735239016,6.77758336947755,5.49687478166462,10.628427809927,18.0188400795208,1.69107881605257,2.0932316446157,1.65458490457098,2.72231663681667,3.35815541042101,3.8859908862879,5.51579021635044,5.9894017028217,3.35549902162275,0.966336483304024,3.16833006883652,23.7008340471134,2.8381530140623,3.3894615864393,7.14564526377873,13.6060288707286,19.6694541233452,17.6687310794354,16.8366060979018,14.6401352424814,21.94756031664,19.7619322868207,21.245818001266,20.0120630611885,34.8293168501075,7.25537227568676,2.88581739386284,2.06341870201794,1.34307693091263,7.34120457322324,15.3899629869969,6.59345847362154,6.85978813053011,14.5455910170255,3.95326289831947,2.30162618253588,1.71868654031819,0.343706364687375,2.05524755931193,2.2661816921691,0.675022500231806,1.80128481289688,2.26571204492102,3.10656187051092,1.55681021376265,2.79317411380722,2.04880326904961,5.34834777550247,4.61148957781561,3.12533964365024,6.00066165064361,7.41726206060019,4.49286893428541,3.79045817645696,5.0695859978048,4.14977951049368,5.3375659257833,5.89031402124797,4.82457939227151,5.23923060411381,6.14186927507734,5.78727661391115,4.12085900803307,5.00476328456951,5.14303878578123,4.79184676630211,4.05341522910446,5.37781741539616,6.86998477031913,6.17686637609238,6.21955107767427,5.5244639401947,6.11118512306378,6.73370725989286,6.05038592433288,6.2057823896605,4.91077251803627,4.33823155320705,4.62975866354739,2.24829520144151,4.44470056046276,7.30561583764214,7.26895661861605,4.63241980150983,6.72416723299222
|short_description=p2@Aff1
}}

Latest revision as of 12:37, 1 October 2015

Short description:p2@Aff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Aff1_5end
Coexpression cluster:NA
Association with transcript: 38bp_to_ENSMUST00000054979, NM_133919, uc008yjt.1_5end
EntrezGene:Aff1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Aff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A534.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.42
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G926.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H229.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D99.77
Mouse Schwann, donor2.CNhs12573.11746-123F98.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.88
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A617.89
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.68
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G429.04
eyeball, embryo E12.CNhs11016.345-16C67.42
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C612.52
eyeball, neonate N01.CNhs11140.1532-43E713.58
eyeball, neonate N02.CNhs11205.1551-44G815.27
eyeball, neonate N16.CNhs11188.777-19A236.99
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D29.39
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I344.28
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G115.93
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G717.39
kidney, neonate N10.CNhs11206.758-6D514.10
kidney, neonate N20.CNhs11113.832-19I118.89
kidney, neonate N25.CNhs11122.1353-25F319.31
kidney, neonate N30.CNhs11203.1385-42H118.63
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F814.52
liver, embryo E13.CNhs10524.378-3H613.96
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D722.11
liver, embryo E16.CNhs10523.462-17F517.61
liver, embryo E17.CNhs10510.481-18A320.37
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F411.19
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B115.15
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H212.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F814.33
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G47.91
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G221.70
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D123.92
spleen, neonate N20.CNhs11112.824-19H128.43
spleen, neonate N25.CNhs11099.1354-25G321.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.96
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A96.78
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B523.70
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F817.67
thymus, neonate N03.CNhs11137.2104-43C716.84
thymus, neonate N06.CNhs11197.681-26C414.64
thymus, neonate N07.CNhs11211.713-19D321.95
thymus, neonate N10.CNhs11194.748-24E419.76
thymus, neonate N20.CNhs11186.820-7A221.25
thymus, neonate N25.CNhs11125.1362-25G720.01
thymus, neonate N30.CNhs11132.1393-42G234.83
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F515.39
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system8.12e-12116
digestive tract8.12e-12116
primitive gut8.12e-12116
subdivision of digestive tract1.09e-11114
gut epithelium1.73e-1155
endoderm-derived structure1.81e-11118
endoderm1.81e-11118
presumptive endoderm1.81e-11118
endo-epithelium9.50e-1169
unilaminar epithelium5.81e-1066
abdomen element9.85e-0849
abdominal segment element9.85e-0849
abdominal segment of trunk9.85e-0849
abdomen9.85e-0849
foregut1.15e-0780
digestive tract diverticulum2.81e-0723
sac2.81e-0723
liver6.81e-0722
epithelial sac6.81e-0722
digestive gland6.81e-0722
epithelium of foregut-midgut junction6.81e-0722
anatomical boundary6.81e-0722
hepatobiliary system6.81e-0722
foregut-midgut junction6.81e-0722
hepatic diverticulum6.81e-0722
liver primordium6.81e-0722
septum transversum6.81e-0722
liver bud6.81e-0722
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