FFCP PHASE1:Mm9::chr5:104183219..104183236,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:104183219..104183236,+
|short_description=p2@Aff1
|description=CAGE_peak_2_at_Aff1_5end
|association_with_transcript=38bp_to_ENSMUST00000054979,NM_133919,u...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17355 | |EntrezGene=17355 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A3KMF4,Q3UP77,Q3UQD9 | |UniProt=A3KMF4,Q3UP77,Q3UQD9 | ||
|association_with_transcript=38bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end | |||
|cluster_id=chr5:104183219..104183236,+ | |||
|description=CAGE_peak_2_at_Aff1_5end | |||
|id=chr5:104183219..104183236,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!8.89e-12!128;UBERON:0001555!8.89e-12!128;UBERON:0007026!8.89e-12!128;UBERON:0004921!1.23e-11!126;UBERON:0004185!1.23e-11!126;UBERON:0005057!1.49e-11!51;UBERON:0003929!1.85e-11!55;UBERON:0004119!1.86e-11!130;UBERON:0000925!1.86e-11!130;UBERON:0006595!1.86e-11!130;UBERON:0005911!9.07e-11!69;UBERON:0002405!1.15e-10!70;UBERON:0000490!6.16e-10!66;UBERON:0003104!3.89e-09!131;UBERON:0009142!3.89e-09!131;UBERON:0005172!9.05e-08!49;UBERON:0005173!9.05e-08!49;UBERON:0002417!9.05e-08!49;UBERON:0000916!9.05e-08!49;UBERON:0000077!1.29e-07!97;UBERON:0001041!1.77e-07!92;UBERON:0009854!2.83e-07!23;UBERON:0009856!2.83e-07!23;UBERON:0002107!6.87e-07!22;UBERON:0007499!6.87e-07!22;UBERON:0006925!6.87e-07!22;UBERON:0009497!6.87e-07!22;UBERON:0000015!6.87e-07!22;UBERON:0002423!6.87e-07!22;UBERON:0006235!6.87e-07!22;UBERON:0008835!6.87e-07!22;UBERON:0003894!6.87e-07!22;UBERON:0004161!6.87e-07!22;UBERON:0008836!6.87e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.12e-12,116;UBERON:0001555,8.12e-12,116;UBERON:0007026,8.12e-12,116;UBERON:0004921,1.09e-11,114;UBERON:0003929,1.73e-11,55;UBERON:0004119,1.81e-11,118;UBERON:0000925,1.81e-11,118;UBERON:0006595,1.81e-11,118;UBERON:0005911,9.50e-11,69;UBERON:0000490,5.81e-10,66;UBERON:0005172,9.85e-08,49;UBERON:0005173,9.85e-08,49;UBERON:0002417,9.85e-08,49;UBERON:0000916,9.85e-08,49;UBERON:0001041,1.15e-07,80;UBERON:0009854,2.81e-07,23;UBERON:0009856,2.81e-07,23;UBERON:0002107,6.81e-07,22;UBERON:0007499,6.81e-07,22;UBERON:0006925,6.81e-07,22;UBERON:0009497,6.81e-07,22;UBERON:0000015,6.81e-07,22;UBERON:0002423,6.81e-07,22;UBERON:0006235,6.81e-07,22;UBERON:0008835,6.81e-07,22;UBERON:0003894,6.81e-07,22;UBERON:0004161,6.81e-07,22;UBERON:0008836,6.81e-07,22 | |||
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| ||
|short_description=p2@Aff1 | |||
}} | }} |
Latest revision as of 12:37, 1 October 2015
Short description: | p2@Aff1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aff1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENSMUST00000054979, NM_133919, uc008yjt.1_5end |
EntrezGene: | Aff1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 8.12e-12 | 116 |
digestive tract | 8.12e-12 | 116 |
primitive gut | 8.12e-12 | 116 |
subdivision of digestive tract | 1.09e-11 | 114 |
gut epithelium | 1.73e-11 | 55 |
endoderm-derived structure | 1.81e-11 | 118 |
endoderm | 1.81e-11 | 118 |
presumptive endoderm | 1.81e-11 | 118 |
endo-epithelium | 9.50e-11 | 69 |
unilaminar epithelium | 5.81e-10 | 66 |
abdomen element | 9.85e-08 | 49 |
abdominal segment element | 9.85e-08 | 49 |
abdominal segment of trunk | 9.85e-08 | 49 |
abdomen | 9.85e-08 | 49 |
foregut | 1.15e-07 | 80 |
digestive tract diverticulum | 2.81e-07 | 23 |
sac | 2.81e-07 | 23 |
liver | 6.81e-07 | 22 |
epithelial sac | 6.81e-07 | 22 |
digestive gland | 6.81e-07 | 22 |
epithelium of foregut-midgut junction | 6.81e-07 | 22 |
anatomical boundary | 6.81e-07 | 22 |
hepatobiliary system | 6.81e-07 | 22 |
foregut-midgut junction | 6.81e-07 | 22 |
hepatic diverticulum | 6.81e-07 | 22 |
liver primordium | 6.81e-07 | 22 |
septum transversum | 6.81e-07 | 22 |
liver bud | 6.81e-07 | 22 |