FFCP PHASE1:Mm9::chr13:34744542..34744557,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66895 | |EntrezGene=66895 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1642 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZU6,D6REG6 | |UniProt=Q8JZU6,D6REG6 | ||
|association_with_transcript=0bp_to_ENSMUST00000021847,ENSMUST00000125037,NM_025831,uc007qbi.1,uc007qbj.1,uc011yyh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000021847,ENSMUST00000125037,NM_025831,uc007qbi.1,uc007qbj.1,uc011yyh.1_5end | ||
|cluster_id=chr13:34744542..34744557,- | |||
|description=CAGE_peak_1_at_1300014I06Rik_5end | |description=CAGE_peak_1_at_1300014I06Rik_5end | ||
|id=chr13:34744542..34744557,- | |id=chr13:34744542..34744557,- | ||
|ontology_enrichment_celltype=CL:0000333!9.40e-07!10;CL:0000095!9.40e-07!10;CL:0000243!9.40e-07!10;CL:0000123!9.40e-07!10;CL:0000125!9.40e-07!10;CL:0000030!9.40e-07!10;CL:0000339!9.40e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.20e-07,10;CL:0000095,9.20e-07,10;CL:0000243,9.20e-07,10;CL:0000123,9.20e-07,10;CL:0000125,9.20e-07,10;CL:0000030,9.20e-07,10;CL:0000339,9.20e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.95e-08!23;UBERON:0009856!2.95e-08!23;UBERON:0002107!5.74e-08!22;UBERON:0007499!5.74e-08!22;UBERON:0006925!5.74e-08!22;UBERON:0009497!5.74e-08!22;UBERON:0000015!5.74e-08!22;UBERON:0002423!5.74e-08!22;UBERON:0006235!5.74e-08!22;UBERON:0008835!5.74e-08!22;UBERON:0003894!5.74e-08!22;UBERON:0004161!5.74e-08!22;UBERON:0008836!5.74e-08!22;UBERON:0003914!4.46e-07!47;UBERON:0002365!5.41e-07!25;UBERON:0002330!5.41e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.87e-08,23;UBERON:0009856,2.87e-08,23;UBERON:0002107,5.59e-08,22;UBERON:0007499,5.59e-08,22;UBERON:0006925,5.59e-08,22;UBERON:0009497,5.59e-08,22;UBERON:0000015,5.59e-08,22;UBERON:0002423,5.59e-08,22;UBERON:0006235,5.59e-08,22;UBERON:0008835,5.59e-08,22;UBERON:0003894,5.59e-08,22;UBERON:0004161,5.59e-08,22;UBERON:0008836,5.59e-08,22;UBERON:0003914,4.68e-07,47;UBERON:0002365,5.29e-07,25;UBERON:0002330,5.29e-07,25 | |||
|phase1_expression=9.60893082628764,101.202868215415,107.83481973532,66.5421264875026,72.6298808422203,9.56911849897772,9.34450562382103,0.516493293766305,0.140788722151667,0,0,0.0797721589953364,0,0,7.32841475994458,5.87178275430495,2.09868563438444,49.8430221266016,41.4085589489331,36.9218997064286,16.6684848696097,0.794327609607082,0,34.7183557461693,27.0702951659261,78.0955471196427,47.8145815736573,45.8953725620944,14.6318032981408,16.8860186939154,19.5122849376668,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,0,0,0,0,0,0,6.16894408080329,6.79225439170748,1.10128051297009,30.5132624295735,76.3088047331563,71.1783232059689,54.0515119426508,22.1178546168073,40.250718022192,33.3887386054895,0,0.672187598284928,29.327575708098,10.0286703978565,15.9858348606007,2.02316460859598,3.70293685490423,2.53532561402472,16.9422266034566,12.450127145556,9.89889689009539,10.8775299882367,10.6572017241915,37.4500138148006,54.9432176609823,1.45165457231869,2.02508907497536,1.05162480675691,5.71301968807607,4.63823935998388,0.367472397644862,0.958454710182364,0,2.20231761998777,2.55374676170375,2.61131106535614,3.69281605644543,4.94033275453012,3.12548022334056,3.07101298901519,2.25105044012672,2.75036845998258,5.89257170947335,3.41692033917847,2.05039390407831,66.1846929732029,27.6591909990835,32.4648227345879,30.1148356943485,392.343459549372,68.002602146365,32.4888208723835,20.1612099193801,20.926218599631,17.3838929029619,15.0675882669664,15.1936017039446,11.2674735821344,11.5493829672886,5.09610479413291,7.11066703153331,12.123498296628,17.2284708523067,11.1215377903252,23.9786147410026,15.7952109024775,2.9688427812965,4.51061849591953,4.87144765299426,5.07354093963329,3.46662073271032,5.64425794251383,2.76466500925286,32.8769307086717,4.77177877835708,3.5384422077995,15.8531512948461,7.72945314611377,4.84875253135222,18.6391761218122,1.75668478206928,0.41889341362691,22.2247638031475,1.07833612055328,0,0.254140454146129,1.79748767285787,1.37250180845588,1.88481528169297,1.73824320192276,1.27857728665165,3.1168206683934,2.92034273521964,7.02691610567182,9.33052279575698,0.505445516867349,3.15662783829711,1.69156575851515,4.36813998423599,2.34080768746954,4.52114453507145,6.19132142277083,2.94661556655154,4.31027932974753,2.58703370739016,0.646703978798527,1.51284864134255,4.04687585577082,8.98702502953057,9.73165372289593,17.7608604926305,13.7874031393322,3.78165106955137,0,0,0.284163499395593,4.97101854085205,6.56672967947069,7.74266864282364,8.52281048106757,9.05115466038058,9.41029388613007,8.37122201101468,13.1453966685813,11.5597688943498,12.671108443338,11.6558899496158,9.80932595504854,14.1813987802572,7.24515380460467,10.8707199195901,2.52347938276953,3.19004298375782,89.2130714056255,35.4363759329149,2.98603550749328,2.55460339046482,4.38149368495117,9.27744213267376,14.6769508937614,19.5932394895936,23.7264530772256,34.0926836278703,50.7697121776544,44.1683367931355,51.6654830865668,18.8752075817387,25.7204279350886,34.0531577264968,2.65535061334314,3.65595240351132,4.50830942692322,3.25842124552503,3.87904974335251,6.17195215034803,4.67950374719504,3.83786384746966,3.767969468193,3.94870924549762,47.728872961031,4.17112764290235,5.50365186316968,5.8464149220062,6.8972441272091,10.3706178693539,19.6061905871693,26.7557407829254,24.3202840162553,25.2596500133035,25.8782771749238,31.6319805518228,33.0759933501434,59.3560363175713,65.300658521976,59.8229966490575,61.1533059451462,2.27389694124582,1.46668478797823,1.18821560042632,2.11221223459652,2.34508760418542,2.61848004974615,28.099245291523,12.9260818167077,14.1737401375216,20.5696651568158,42.1128718819447,31.7740366633248,51.4950648550181,0,0,4.42587845717133,4.41498794087572,3.85321415970701,3.5163505977661,3.77050374366353,7.06918596172244,19.2460013843917,23.0358859135017,20.2497993868831,13.3822526853429,14.2591151412732,10.190755108398,18.2164815753702,16.9508397588561,16.602086673754,1.28528526568723,1.13552068166615,4.80777129901589,4.0721739838394,0.494910368917606,0,1.45668381692989,1.81394134178851,2.26326095707078,3.83892460745005,3.99665692327106,14.4719844174204,5.08947221268508,2.85197902707777,4.10847785316561,0,2.06271086496374,2.38307724027652,1.26042765821917,1.4229455216103,3.21505552547388,2.48276327099183,4.99432689285798,3.78462747384878,9.13394847343798,25.3445444708807,31.1393144169816,1.7642271844397,9.39851641766436,19.5371956302046,15.9829251059613,33.5436286648813,40.5428022370301,41.3902788014388,2.03967832211561,12.6444451790411,4.12773735926445,6.2966139305702,5.27431679613135,7.51818252465638,9.60868327467395,4.24946074984638,2.51912614182584,3.31679937130617,5.72802370809068,2.53068794864908,2.23651413839534,3.56417624711944,3.13632444021703,7.42432716737004,6.20375993370175,9.91841468704031,4.18809507174447,11.7949625695532,4.97071450469541,0.56369293868419,2.54178128274764,2.15096037594227,1.36115831840833,1.16243841129958,1.35164900392623,0.938857909166032,1.17183946359555,0.314578033277133,0.966336483304024,0.864090018773596,2.8441000856536,5.0681303822541,4.10843828659309,1.29920822977795,2.14832034800978,1.58945083825012,2.64429988943931,1.77227432609493,1.51449674922221,1.37172251979,1.20991422164209,2.82627854145282,1.73181314952593,2.10378423926824,8.38902419376282,5.99362074109975,4.84454825691169,11.4161539127573,5.79568782096571,6.94425159169373,1.64836461840539,21.0081011497485,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,1.71853182343688,0.685082519770642,0,3.37511250115903,1.35096360967266,0.906284817968409,0.51776031175182,1.24544817101012,2.39414924040619,5.63420898988643,13.3708694387562,7.33646069197938,10.6629234901008,9.33436256766784,11.3319281481392,11.2321723357135,8.59170519996911,10.1391719956096,6.97917463128482,6.9294715527713,9.41169740351578,7.63891737109657,11.9073422820768,12.051969898265,8.87382414133043,7.00546031365621,10.1567254892734,8.22886205724997,9.40621772644489,6.43777712857767,8.43009216467505,9.12860990028707,10.4922113785679,8.78054269789308,9.73357932320019,12.0865661322817,11.7839877048125,11.8635018124174,10.0474572023075,8.18462086339379,9.45114731234393,10.8027702149439,10.4920442733937,14.9716229405061,13.3220053509945,13.0076065806813,19.1914534633978,12.9845987947436 | |phase1_expression=9.60893082628764,101.202868215415,107.83481973532,66.5421264875026,72.6298808422203,9.56911849897772,9.34450562382103,0.516493293766305,0.140788722151667,0,0,0.0797721589953364,0,0,7.32841475994458,5.87178275430495,2.09868563438444,49.8430221266016,41.4085589489331,36.9218997064286,16.6684848696097,0.794327609607082,0,34.7183557461693,27.0702951659261,78.0955471196427,47.8145815736573,45.8953725620944,14.6318032981408,16.8860186939154,19.5122849376668,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,0,0,0,0,0,0,6.16894408080329,6.79225439170748,1.10128051297009,30.5132624295735,76.3088047331563,71.1783232059689,54.0515119426508,22.1178546168073,40.250718022192,33.3887386054895,0,0.672187598284928,29.327575708098,10.0286703978565,15.9858348606007,2.02316460859598,3.70293685490423,2.53532561402472,16.9422266034566,12.450127145556,9.89889689009539,10.8775299882367,10.6572017241915,37.4500138148006,54.9432176609823,1.45165457231869,2.02508907497536,1.05162480675691,5.71301968807607,4.63823935998388,0.367472397644862,0.958454710182364,0,2.20231761998777,2.55374676170375,2.61131106535614,3.69281605644543,4.94033275453012,3.12548022334056,3.07101298901519,2.25105044012672,2.75036845998258,5.89257170947335,3.41692033917847,2.05039390407831,66.1846929732029,27.6591909990835,32.4648227345879,30.1148356943485,392.343459549372,68.002602146365,32.4888208723835,20.1612099193801,20.926218599631,17.3838929029619,15.0675882669664,15.1936017039446,11.2674735821344,11.5493829672886,5.09610479413291,7.11066703153331,12.123498296628,17.2284708523067,11.1215377903252,23.9786147410026,15.7952109024775,2.9688427812965,4.51061849591953,4.87144765299426,5.07354093963329,3.46662073271032,5.64425794251383,2.76466500925286,32.8769307086717,4.77177877835708,3.5384422077995,15.8531512948461,7.72945314611377,4.84875253135222,18.6391761218122,1.75668478206928,0.41889341362691,22.2247638031475,1.07833612055328,0,0.254140454146129,1.79748767285787,1.37250180845588,1.88481528169297,1.73824320192276,1.27857728665165,3.1168206683934,2.92034273521964,7.02691610567182,9.33052279575698,0.505445516867349,3.15662783829711,1.69156575851515,4.36813998423599,2.34080768746954,4.52114453507145,6.19132142277083,2.94661556655154,4.31027932974753,2.58703370739016,0.646703978798527,1.51284864134255,4.04687585577082,8.98702502953057,9.73165372289593,17.7608604926305,13.7874031393322,3.78165106955137,0,0,0.284163499395593,4.97101854085205,6.56672967947069,7.74266864282364,8.52281048106757,9.05115466038058,9.41029388613007,8.37122201101468,13.1453966685813,11.5597688943498,12.671108443338,11.6558899496158,9.80932595504854,14.1813987802572,7.24515380460467,10.8707199195901,2.52347938276953,3.19004298375782,89.2130714056255,35.4363759329149,2.98603550749328,2.55460339046482,4.38149368495117,9.27744213267376,14.6769508937614,19.5932394895936,23.7264530772256,34.0926836278703,50.7697121776544,44.1683367931355,51.6654830865668,18.8752075817387,25.7204279350886,34.0531577264968,2.65535061334314,3.65595240351132,4.50830942692322,3.25842124552503,3.87904974335251,6.17195215034803,4.67950374719504,3.83786384746966,3.767969468193,3.94870924549762,47.728872961031,4.17112764290235,5.50365186316968,5.8464149220062,6.8972441272091,10.3706178693539,19.6061905871693,26.7557407829254,24.3202840162553,25.2596500133035,25.8782771749238,31.6319805518228,33.0759933501434,59.3560363175713,65.300658521976,59.8229966490575,61.1533059451462,2.27389694124582,1.46668478797823,1.18821560042632,2.11221223459652,2.34508760418542,2.61848004974615,28.099245291523,12.9260818167077,14.1737401375216,20.5696651568158,42.1128718819447,31.7740366633248,51.4950648550181,0,0,4.42587845717133,4.41498794087572,3.85321415970701,3.5163505977661,3.77050374366353,7.06918596172244,19.2460013843917,23.0358859135017,20.2497993868831,13.3822526853429,14.2591151412732,10.190755108398,18.2164815753702,16.9508397588561,16.602086673754,1.28528526568723,1.13552068166615,4.80777129901589,4.0721739838394,0.494910368917606,0,1.45668381692989,1.81394134178851,2.26326095707078,3.83892460745005,3.99665692327106,14.4719844174204,5.08947221268508,2.85197902707777,4.10847785316561,0,2.06271086496374,2.38307724027652,1.26042765821917,1.4229455216103,3.21505552547388,2.48276327099183,4.99432689285798,3.78462747384878,9.13394847343798,25.3445444708807,31.1393144169816,1.7642271844397,9.39851641766436,19.5371956302046,15.9829251059613,33.5436286648813,40.5428022370301,41.3902788014388,2.03967832211561,12.6444451790411,4.12773735926445,6.2966139305702,5.27431679613135,7.51818252465638,9.60868327467395,4.24946074984638,2.51912614182584,3.31679937130617,5.72802370809068,2.53068794864908,2.23651413839534,3.56417624711944,3.13632444021703,7.42432716737004,6.20375993370175,9.91841468704031,4.18809507174447,11.7949625695532,4.97071450469541,0.56369293868419,2.54178128274764,2.15096037594227,1.36115831840833,1.16243841129958,1.35164900392623,0.938857909166032,1.17183946359555,0.314578033277133,0.966336483304024,0.864090018773596,2.8441000856536,5.0681303822541,4.10843828659309,1.29920822977795,2.14832034800978,1.58945083825012,2.64429988943931,1.77227432609493,1.51449674922221,1.37172251979,1.20991422164209,2.82627854145282,1.73181314952593,2.10378423926824,8.38902419376282,5.99362074109975,4.84454825691169,11.4161539127573,5.79568782096571,6.94425159169373,1.64836461840539,21.0081011497485,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,1.71853182343688,0.685082519770642,0,3.37511250115903,1.35096360967266,0.906284817968409,0.51776031175182,1.24544817101012,2.39414924040619,5.63420898988643,13.3708694387562,7.33646069197938,10.6629234901008,9.33436256766784,11.3319281481392,11.2321723357135,8.59170519996911,10.1391719956096,6.97917463128482,6.9294715527713,9.41169740351578,7.63891737109657,11.9073422820768,12.051969898265,8.87382414133043,7.00546031365621,10.1567254892734,8.22886205724997,9.40621772644489,6.43777712857767,8.43009216467505,9.12860990028707,10.4922113785679,8.78054269789308,9.73357932320019,12.0865661322817,11.7839877048125,11.8635018124174,10.0474572023075,8.18462086339379,9.45114731234393,10.8027702149439,10.4920442733937,14.9716229405061,13.3220053509945,13.0076065806813,19.1914534633978,12.9845987947436 | ||
|short_description=p1@1300014I06Rik | |short_description=p1@1300014I06Rik | ||
}} | }} |
Latest revision as of 13:06, 1 October 2015
Short description: | p1@1300014I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1300014I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1642 |
Association with transcript: | 0bp_to_ENSMUST00000021847, ENSMUST00000125037, NM_025831, uc007qbi.1, uc007qbj.1, uc011yyh.1_5end |
EntrezGene: | 1300014I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.20e-07 | 10 |
neuron associated cell | 9.20e-07 | 10 |
glial cell (sensu Vertebrata) | 9.20e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.20e-07 | 10 |
glial cell | 9.20e-07 | 10 |
glioblast | 9.20e-07 | 10 |
glioblast (sensu Vertebrata) | 9.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.87e-08 | 23 |
sac | 2.87e-08 | 23 |
liver | 5.59e-08 | 22 |
epithelial sac | 5.59e-08 | 22 |
digestive gland | 5.59e-08 | 22 |
epithelium of foregut-midgut junction | 5.59e-08 | 22 |
anatomical boundary | 5.59e-08 | 22 |
hepatobiliary system | 5.59e-08 | 22 |
foregut-midgut junction | 5.59e-08 | 22 |
hepatic diverticulum | 5.59e-08 | 22 |
liver primordium | 5.59e-08 | 22 |
septum transversum | 5.59e-08 | 22 |
liver bud | 5.59e-08 | 22 |
epithelial tube | 4.68e-07 | 47 |
exocrine gland | 5.29e-07 | 25 |
exocrine system | 5.29e-07 | 25 |