FFCP PHASE1:Mm9::chrX:108651566..108651573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67071 | |EntrezGene=67071 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=B1B0X3 | |UniProt=B1B0X3 | ||
|association_with_transcript=0bp_to_ENSMUST00000123951_5end | |association_with_transcript=0bp_to_ENSMUST00000123951_5end | ||
|cluster_id=chrX:108651566..108651573,- | |||
|description=CAGE_peak_6_at_Rps6ka6_5end | |description=CAGE_peak_6_at_Rps6ka6_5end | ||
|id=chrX:108651566..108651573,- | |id=chrX:108651566..108651573,- | ||
|ontology_enrichment_celltype=CL:0000349!5.06e-12!3;CL:0000351!5.06e-12!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.11e-24,3;CL:0000351,5.11e-24,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.34e-12!3;UBERON:0000478!3.34e-12!3;UBERON:0000158!3.34e-12!3;UBERON:0000358!5.06e-12!3;UBERON:0000307!5.06e-12!3;UBERON:0005795!4.57e-09!4;UBERON:0000995!4.57e-09!4;UBERON:0001987!1.07e-08!2;UBERON:0003124!1.07e-08!2;UBERON:0004340!1.07e-08!2;UBERON:0005172!6.85e-08!49;UBERON:0005173!6.85e-08!49;UBERON:0002417!6.85e-08!49;UBERON:0000916!6.85e-08!49;UBERON:0003975!2.51e-07!5;UBERON:0002107!5.51e-07!22;UBERON:0007499!5.51e-07!22;UBERON:0006925!5.51e-07!22;UBERON:0009497!5.51e-07!22;UBERON:0000015!5.51e-07!22;UBERON:0002423!5.51e-07!22;UBERON:0006235!5.51e-07!22;UBERON:0008835!5.51e-07!22;UBERON:0003894!5.51e-07!22;UBERON:0004161!5.51e-07!22;UBERON:0008836!5.51e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-52,3;UBERON:0000478,1.10e-52,3;UBERON:0000158,1.10e-52,3;UBERON:0001987,9.52e-36,2;UBERON:0003124,9.52e-36,2;UBERON:0004340,9.52e-36,2;UBERON:0000358,5.11e-24,3;UBERON:0000307,5.11e-24,3;UBERON:0007010,5.11e-24,3;UBERON:0000305,1.16e-18,1;UBERON:0005795,1.74e-18,4;UBERON:0000995,1.74e-18,4;UBERON:0003975,5.16e-15,5;UBERON:0003134,8.88e-10,8;UBERON:0004175,8.40e-09,9;UBERON:0000474,8.40e-09,9;UBERON:0003100,2.24e-07,11;UBERON:0004923,2.41e-07,24;UBERON:0004871,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0,0,33.6185156118748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9470951854154,62.0667967630993,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,47.7269799754239,0.807424709485281,4.19711540910196,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0,0,33.6185156118748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9470951854154,62.0667967630993,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,47.7269799754239,0.807424709485281,4.19711540910196,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Rps6ka6 | |short_description=p6@Rps6ka6 | ||
}} | }} |
Latest revision as of 13:11, 1 October 2015
Short description: | p6@Rps6ka6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rps6ka6_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | 0bp_to_ENSMUST00000123951_5end |
EntrezGene: | Rps6ka6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.11e-24 | 3 |
trophoblast cell | 5.11e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.10e-52 | 3 |
extraembryonic structure | 1.10e-52 | 3 |
membranous layer | 1.10e-52 | 3 |
placenta | 9.52e-36 | 2 |
chorion | 9.52e-36 | 2 |
allantois | 9.52e-36 | 2 |
blastocyst | 5.11e-24 | 3 |
blastula | 5.11e-24 | 3 |
cleaving embryo | 5.11e-24 | 3 |
amnion | 1.16e-18 | 1 |
embryonic uterus | 1.74e-18 | 4 |
uterus | 1.74e-18 | 4 |
internal female genitalia | 5.16e-15 | 5 |
female reproductive organ | 8.88e-10 | 8 |
internal genitalia | 8.40e-09 | 9 |
female reproductive system | 8.40e-09 | 9 |
female organism | 2.24e-07 | 11 |
organ component layer | 2.41e-07 | 24 |
somatic layer of lateral plate mesoderm | 4.17e-07 | 3 |