FFCP PHASE1:Mm9::chrX:12648185..12648208,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:12648185..12648208,+
|short_description=p3@Usp9x
|description=CAGE_peak_3_at_Usp9x_5end
|association_with_transcript=-415bp_to_ENSMUST00000169594,NM_009481...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22284 | |EntrezGene=22284 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5 | |UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5 | ||
|association_with_transcript=-415bp_to_ENSMUST00000169594,NM_009481,uc009srg.1,uc009srh.1,uc009sri.1_5end | |||
|cluster_id=chrX:12648185..12648208,+ | |||
|description=CAGE_peak_3_at_Usp9x_5end | |||
|id=chrX:12648185..12648208,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.21e-13!63;UBERON:0002346!1.14e-09!71;UBERON:0003075!1.14e-09!71;UBERON:0007284!1.14e-09!71;UBERON:0004111!1.52e-09!122;UBERON:0000955!2.07e-09!50;UBERON:0006238!2.07e-09!50;UBERON:0003056!5.40e-09!49;UBERON:0002616!6.44e-09!49;UBERON:0000025!1.74e-08!114;UBERON:0004121!4.53e-08!102;UBERON:0000924!4.53e-08!102;UBERON:0006601!4.53e-08!102;UBERON:0001017!5.81e-08!73;UBERON:0005743!5.81e-08!73;UBERON:0001049!2.34e-07!52;UBERON:0005068!2.34e-07!52;UBERON:0006241!2.34e-07!52;UBERON:0007135!2.34e-07!52;UBERON:0000073!2.44e-07!75;UBERON:0001016!2.44e-07!75;UBERON:0000468!5.73e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.64e-14,92;UBERON:0002346,6.10e-11,64;UBERON:0003075,6.10e-11,64;UBERON:0007284,6.10e-11,64;UBERON:0010371,2.02e-09,73;UBERON:0003056,2.38e-09,49;UBERON:0004111,4.86e-09,122;UBERON:0000955,8.02e-09,47;UBERON:0006238,8.02e-09,47;UBERON:0004121,1.08e-08,95;UBERON:0000924,1.08e-08,95;UBERON:0006601,1.08e-08,95;UBERON:0001017,1.90e-08,73;UBERON:0002616,2.56e-08,46;UBERON:0000025,4.16e-08,114;UBERON:0000073,5.69e-08,54;UBERON:0001016,1.25e-07,75;UBERON:0001049,1.51e-07,52;UBERON:0005068,1.51e-07,52;UBERON:0006241,1.51e-07,52;UBERON:0007135,1.51e-07,52;UBERON:0003080,6.75e-07,40 | |||
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|phase1_expression=3.68342348341026,0.697950815278722,0,0,0.500895729946347,1.00727563147134,0.700837921786577,0.774739940649458,1.54867594366833,0.234064526321993,0.171217968225505,0.239316476986009,0.684802919724823,0.786783621770977,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,3.14660173558958,0.397163804803541,0,0.47997726838022,0.45881856213434,0,0.430761996159075,0,0.950117097281869,1.00812051903972,0,0,0.61506478758457,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0,2.14024590558481,1.4192770370732,1.28482726513177,1.56478268869608,0.436050312760893,0,2.52758868796568,0.419959264876088,0,0.671130424230945,0.725362142011344,0.672187598284928,0.257259436035947,0.85960031981627,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,1.97773272513395,0,0,0.384218305321555,2.69592992002042,1.62007125998029,2.73422449756797,1.14260393761521,0.883474163806454,1.83736198822431,1.24599112323707,0,3.30347642998166,2.29837208553338,2.76491759861238,1.58263545276233,1.28082701043374,1.04182674111352,0.558365998002762,0.56276261003168,1.98637722109853,1.17851434189467,2.42031857358475,0.186399445825301,0.605809546665472,0.755715601067855,2.02905142091174,0.860423876981386,0,0.539703191637817,0.649776417447669,1.34408066129201,1.68533304158102,1.1930122580464,0.259786004602869,0.70667914902068,2.67602497575693,0,2.54805239706646,0,0.216491041011214,0.253359865475099,1.51657333504435,2.16949371466214,0.517875767294343,1.63286352971307,1.73485326766136,1.21786191324856,0.461230994512117,1.65794904607885,1.99900802130698,1.0053327306374,1.73036477414062,1.73519228303894,0,1.7794353494215,1.54589062922275,0.484875253135222,1.86391761218122,7.02673912827713,3.35114730901528,0,0.838705871541442,0,0.889491589511453,2.84602214869163,2.74500361691176,4.39790232395025,2.9550134432687,3.06858548796397,3.74018480207208,5.51620294430376,2.03678727700633,1.24406970610093,1.76905930903572,2.94618598241064,2.73252930221678,1.37941262660084,3.06105620669094,2.41127708537144,2.17716797284249,4.09963904911519,2.99845518591132,2.58703370739016,1.94011193639558,3.21480336285293,1.93546236580344,1.7535658594206,2.22437799380478,3.1342694986995,2.26360350048738,2.38841120182192,0,0.772043721344145,0,3.31401236056803,2.81431271977315,2.70093092191522,2.13070262026689,2.16440654922144,1.69693824176116,3.0229412817553,3.48755421819505,2.33530684734339,1.15191894939436,3.94001913789829,3.24275238183423,3.50879969820798,2.63460138349261,2.68412837520744,5.25724871410318,4.21908910755066,0.330418782983798,0.793351699990633,2.98603550749328,2.78684006232526,1.15980715189884,1.61346819698674,1.55664630691409,1.52180500890047,0,1.31759163779209,1.25667604400135,0.795825888164603,1.36474860983384,0.898819408654221,0.648414149624083,0.597423819763102,0.758671603812327,1.37098215131675,0,2.64746726198909,3.29719228184964,2.31448205638051,1.7706230394792,1.47610147979602,0.627994911365499,1.60416313098341,1.48226313543574,1.00107063429656,0.393117990226406,0.449724224769707,0.811440485554012,0.964708639009667,1.01850340712568,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,2.97712758134803,1.87222603868736,1.51547326768267,2.15276896226295,1.92977408545347,2.21703828199926,2.4633883530163,3.58522948172457,2.03694102930226,1.87752198630802,2.34508760418542,0.952174563544055,2.53673742215138,2.99506773801763,1.7717175171902,1.91345722388985,2.45794972073607,1.89953480052485,1.44649058581512,0,1.08781136763742,0,1.65562047782839,4.49541651965817,5.74337264301796,1.3114795630134,4.03953483526997,2.52406575533005,2.73307121007647,2.80050417052639,1.67278158566786,2.67358408898873,2.83076530788832,1.61924280669958,3.50707029493574,2.37172666767914,3.85585579706168,2.12910127812403,1.42452482933804,1.46598263418218,2.96946221350564,0,1.21390318077491,1.81394134178851,3.20628635585027,0.590603785761546,3.07435147943927,1.80899805217755,1.45413491791002,3.56497378384721,0.632073515871632,2.10837217149998,3.09406629744561,1.70219802876894,3.96134406868882,0.646793418913773,3.85806663056866,4.43350584105684,3.21063871683727,4.11372551505302,0.913394847343798,0.704015124191131,0.847328283455281,0.882113592219848,0.98931751764888,1.45317984026315,1.38719727334758,0.716234064018819,0.656563598980245,0.582961673259701,4.07935664423121,0.170870880797853,0.82554747185289,0.925972636848558,0.565105371014073,0.27338845544205,0.457556346413045,0.849892149969277,0.979660166265606,1.79659965945751,0.954670618015114,1.58167996790568,2.84647253977588,2.05210147561422,2.50905955217362,1.52853794622324,2.02296519577231,1.32245529160537,2.35580347785627,0.777689839750757,1.86401793926078,2.81846469342095,1.94371509857172,0.992750942742586,2.52786544847262,2.19571699912143,1.18269287843545,2.11243029562357,1.69265700297135,1.67774951081137,0.483168241652012,1.44015003128933,0,0.405450430580328,1.43795340030758,0.77952493786677,1.43221356533985,1.19208812868759,0.240390899039938,0.886137163047463,1.21159739937777,0.914481679859998,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| ||
|short_description=p3@Usp9x | |||
}} | }} |
Latest revision as of 13:45, 1 October 2015
Short description: | p3@Usp9x |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Usp9x_5end |
Coexpression cluster: | NA |
Association with transcript: | -415bp_to_ENSMUST00000169594, NM_009481, uc009srg.1, uc009srh.1, uc009sri.1_5end |
EntrezGene: | Usp9x |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.64e-14 | 92 |
neurectoderm | 6.10e-11 | 64 |
neural plate | 6.10e-11 | 64 |
presumptive neural plate | 6.10e-11 | 64 |
ecto-epithelium | 2.02e-09 | 73 |
pre-chordal neural plate | 2.38e-09 | 49 |
anatomical conduit | 4.86e-09 | 122 |
brain | 8.02e-09 | 47 |
future brain | 8.02e-09 | 47 |
ectoderm-derived structure | 1.08e-08 | 95 |
ectoderm | 1.08e-08 | 95 |
presumptive ectoderm | 1.08e-08 | 95 |
central nervous system | 1.90e-08 | 73 |
regional part of brain | 2.56e-08 | 46 |
tube | 4.16e-08 | 114 |
regional part of nervous system | 5.69e-08 | 54 |
nervous system | 1.25e-07 | 75 |
neural tube | 1.51e-07 | 52 |
neural rod | 1.51e-07 | 52 |
future spinal cord | 1.51e-07 | 52 |
neural keel | 1.51e-07 | 52 |
anterior neural tube | 6.75e-07 | 40 |