FFCP PHASE1:Mm9::chrX:12648596..12648625,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22284 | |EntrezGene=22284 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5 | |UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5 | ||
|association_with_transcript=0bp_to_ENSMUST00000169594,NM_009481,uc009srg.1,uc009srh.1,uc009sri.1_5end | |association_with_transcript=0bp_to_ENSMUST00000169594,NM_009481,uc009srg.1,uc009srh.1,uc009sri.1_5end | ||
|cluster_id=chrX:12648596..12648625,+ | |||
|description=CAGE_peak_2_at_Usp9x_5end | |description=CAGE_peak_2_at_Usp9x_5end | ||
|id=chrX:12648596..12648625,+ | |id=chrX:12648596..12648625,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.51e-09!24;UBERON:0005156!4.56e-09!26;UBERON:0000990!4.56e-09!26;UBERON:0000991!1.02e-08!18;UBERON:0005564!1.02e-08!18;UBERON:0004176!2.90e-08!17;UBERON:0009196!2.90e-08!17;UBERON:0009117!2.90e-08!17;UBERON:0000033!7.95e-08!63;UBERON:0002346!9.23e-08!71;UBERON:0003075!9.23e-08!71;UBERON:0007284!9.23e-08!71;UBERON:0003135!1.06e-07!15;UBERON:0000468!1.43e-07!333;UBERON:0000955!3.02e-07!50;UBERON:0006238!3.02e-07!50;UBERON:0000473!3.37e-07!14;UBERON:0001049!3.42e-07!52;UBERON:0005068!3.42e-07!52;UBERON:0006241!3.42e-07!52;UBERON:0007135!3.42e-07!52;UBERON:0003101!8.34e-07!16;UBERON:0000079!8.34e-07!16;UBERON:0002616!8.40e-07!49;UBERON:0004121!9.72e-07!102;UBERON:0000924!9.72e-07!102;UBERON:0006601!9.72e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.51e-09,24;UBERON:0005156,4.56e-09,26;UBERON:0000990,4.56e-09,26;UBERON:0000991,1.02e-08,18;UBERON:0005564,1.02e-08,18;UBERON:0010314,2.52e-08,92;UBERON:0004176,2.90e-08,17;UBERON:0009196,2.90e-08,17;UBERON:0009117,2.90e-08,17;UBERON:0000073,5.50e-08,54;UBERON:0003135,1.06e-07,15;UBERON:0010371,1.80e-07,73;UBERON:0002346,1.81e-07,64;UBERON:0003075,1.81e-07,64;UBERON:0007284,1.81e-07,64;UBERON:0000473,3.37e-07,14;UBERON:0001049,3.43e-07,52;UBERON:0005068,3.43e-07,52;UBERON:0006241,3.43e-07,52;UBERON:0007135,3.43e-07,52;UBERON:0003101,8.34e-07,16;UBERON:0000079,8.34e-07,16 | |||
|phase1_expression=5.2849119544582,5.58360652222978,7.27998783023258,4.23449895829562,6.01074875935617,3.52546471014969,4.43864017131499,3.09895976259783,6.75785866328,8.89445200023575,2.39705155515707,0.957265907944037,2.05440875917447,2.01066925563694,2.6648780945253,5.26435695213547,6.29605690315332,3.78554598429885,3.56497527374921,3.39511721438424,6.63337663178344,3.17731043842833,2.61199789138935,4.7997726838022,3.21172993494038,4.01962374880514,3.87685796543167,1.29282739611533,3.99049180858385,3.2763916868791,3.54768817048488,1.90509202037889,1.84519436275371,0,2.59966457776147,2.1610503896604,3.06254034393554,7.53356935326434,3.1253413780952,3.14114246384279,5.88231488031014,5.46436387966757,4.85510353031154,11.2048167998264,8.11015449756117,7.70896359079063,0.782391344348039,1.52617609466313,1.31811709640683,1.55543919259427,1.25987779462826,0,3.52343472721246,5.07753499407941,4.03312558970957,4.11615097657515,5.73066879877513,3.6097046459421,6.87875966922632,3.70293685490423,5.07065122804943,2.71075625655306,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,2.39680088414724,1.92109152660777,5.08079100311541,1.21505344498522,3.57552434297349,6.56997264128748,5.96345060569357,4.89963196859816,2.1086003624012,1.83843757322004,11.0115880999389,13.0241084846891,12.9029487935245,4.87979264601717,2.8361169516747,6.25096044668112,8.93385596804419,14.6318278608237,12.6822545654752,11.490514833473,11.2473627831291,7.82877672466262,4.84647637332378,6.65029728939713,2.6087803983151,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,3.58421509677868,4.49422144421606,3.2381761289831,1.29893002301434,2.47337702157238,8.59144860637751,3.84979432242953,10.1922095882658,14.2213340630666,3.030874574157,4.05375784760158,2.52762222507392,4.90990682791958,3.10725460376606,7.27366481417641,7.28638372417771,5.48037860961854,4.61230994512117,6.33035090321015,7.05532242814229,4.77533047052767,13.8429181931249,7.22996784599558,0.884610551949874,6.95597454773859,3.09178125844551,5.33362778448744,5.59175283654366,10.2473278954042,12.1479089951804,3.0654846625031,2.75574786363617,0,3.30382590389968,10.1857634795279,10.0650132620098,7.91622418311046,14.6012428961512,16.1100738118108,11.6361304953354,11.5191296778108,7.53611292492341,6.71797641294502,11.8779696463827,4.62972082950243,6.11566081924707,6.20735681970377,5.22180176435513,7.38453607395004,7.55205140579739,7.43059577652129,7.40243624021858,5.69147415625834,3.88022387279116,6.42960672570586,6.51019159406611,4.16471891612392,6.39508673218875,6.61679116392116,7.61393904709391,10.3497818745616,2.80885274925294,2.31613116403244,3.12579849335152,6.83515049367156,7.03578179943289,5.94204802821349,8.04932100989715,7.47704080640135,5.55361606394562,5.34828072925938,5.36546802799238,6.65562451492866,4.27855609775049,7.88003827579657,7.05298643048945,7.01759939641595,4.83010253640311,5.2340503316545,11.1453672738987,9.98174740079059,4.29544417878937,2.11560453330835,6.39864751605702,5.10920678092965,5.41243337552792,5.44545516483025,5.33707305227689,4.75564065281398,3.79623249235609,6.25856027951241,7.03738584640755,6.16765063327568,5.65395852645448,5.39291645192533,2.16138049874694,4.58024928485045,2.27601481143698,6.62641373136427,6.76246414038483,5.29493452397817,5.81857461502877,6.8031745293609,5.56481526693464,5.16635517928608,7.06494275286187,4.81248939295022,3.55743152504579,4.67166296005063,2.94838492669805,4.04751802292737,3.65148218499305,4.58236603529592,2.5462585178142,2.01387296215567,5.83686816390127,6.58947391651396,10.0637744569148,6.32639611036456,4.36852742360385,3.53610429125956,3.40855085691633,5.78932225636041,7.20537441649758,5.87423376488503,4.07412441105065,6.28056817368196,4.22442446919304,5.69521275302174,6.66522194480839,8.19561321002755,5.67486518782288,6.64394068946325,4.14582398509466,5.24362607090362,7.42545422023351,5.64131328467895,3.01582567878545,1.63171705145613,4.42587845717133,5.51873492609465,13.8073507389501,11.7211686592203,6.72133276044369,6.31177318010932,4.41711507182759,4.68526493155966,5.81643173878557,5.9742199488138,8.46634961513098,4.52922449262132,3.23848561339915,4.9683495844923,3.16230222357219,14.1381379225595,9.36804562374573,7.47875535402472,10.2618784392753,7.9185659026817,2.65490276679926,3.64170954232472,3.93020624054176,4.90373207365335,2.65771703592696,5.53383266299069,8.5281336745513,8.72480950746013,3.56497378384721,4.10847785316561,2.10837217149998,3.09406629744561,8.17055053809091,6.12207719706455,1.94038025674132,6.21577401591618,11.8817956540323,9.0968096977056,10.2020392773315,5.17590413494819,14.54964589995,23.3015277950202,3.52845436887939,5.27636009412736,5.00539722757307,5.66941494324665,5.72987251215055,7.2221995887827,6.99554007911642,13.1651964427462,3.2465467351592,4.33412422722767,4.25947412950337,4.52084296811258,4.92099219795691,6.17701067657611,2.88963330989554,4.3384950220334,4.69879910935041,0,7.43389584915668,4.26970880966382,4.86024033698106,3.13632444021703,2.62035076495413,4.98998081623837,5.53778153359751,5.49687478166462,5.57344385154709,5.59205381778233,8.45539408026285,17.9419855252775,11.913011312911,10.6948153589226,9.68698676082983,11.9958849098453,14.787012069365,13.6714604086148,18.0358072412223,13.5287107662563,6.33666013767304,5.37218905067903,4.86540516696394,3.49217254360413,3.24802057444488,4.833720783022,3.17890167650024,2.16351809135944,3.83992770653901,2.72609414859999,3.73413352609499,2.72230699869469,3.11865218367208,4.32953287381483,5.14258369598903,3.85441652145859,15.0950448294364,5.11368982674011,19.306730881869,5.21611903886914,6.56888664079137,5.12824547948342,4.71610433973945,7.52358156053045,13.5540442228096,9.66682996665071,12.0308057822273,8.76451229952807,8.90607275701835,15.107877947794,12.1504050041725,13.0593148935024,15.406841905463,14.497288729051,8.51056250190249,7.98049746802062,8.70741389346084,3.8897074730927,4.61148957781561,6.25067928730048,4.66718128383392,3.5025959730612,4.1719497246936,7.58091635291392,6.33698249725599,4.71565853465191,5.15028291084353,6.59459069770154,4.70970845436029,6.19181798667996,5.67833197129792,4.62982129112892,2.88460130562315,7.35994600671987,5.14303878578123,7.27650805253284,5.00715998889374,6.68593516508711,6.58765662907314,5.58456412085065,6.0366231048015,6.83981249738391,4.6173398707593,2.80571135828869,4.86403574309114,5.1222330835293,5.72923460437565,6.97215785336847,4.82266527452853,6.74488560432454,4.91256377735358,5.37177635120746,6.31251495827183,4.85301122062934,6.26043156175138 | |phase1_expression=5.2849119544582,5.58360652222978,7.27998783023258,4.23449895829562,6.01074875935617,3.52546471014969,4.43864017131499,3.09895976259783,6.75785866328,8.89445200023575,2.39705155515707,0.957265907944037,2.05440875917447,2.01066925563694,2.6648780945253,5.26435695213547,6.29605690315332,3.78554598429885,3.56497527374921,3.39511721438424,6.63337663178344,3.17731043842833,2.61199789138935,4.7997726838022,3.21172993494038,4.01962374880514,3.87685796543167,1.29282739611533,3.99049180858385,3.2763916868791,3.54768817048488,1.90509202037889,1.84519436275371,0,2.59966457776147,2.1610503896604,3.06254034393554,7.53356935326434,3.1253413780952,3.14114246384279,5.88231488031014,5.46436387966757,4.85510353031154,11.2048167998264,8.11015449756117,7.70896359079063,0.782391344348039,1.52617609466313,1.31811709640683,1.55543919259427,1.25987779462826,0,3.52343472721246,5.07753499407941,4.03312558970957,4.11615097657515,5.73066879877513,3.6097046459421,6.87875966922632,3.70293685490423,5.07065122804943,2.71075625655306,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,2.39680088414724,1.92109152660777,5.08079100311541,1.21505344498522,3.57552434297349,6.56997264128748,5.96345060569357,4.89963196859816,2.1086003624012,1.83843757322004,11.0115880999389,13.0241084846891,12.9029487935245,4.87979264601717,2.8361169516747,6.25096044668112,8.93385596804419,14.6318278608237,12.6822545654752,11.490514833473,11.2473627831291,7.82877672466262,4.84647637332378,6.65029728939713,2.6087803983151,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,3.58421509677868,4.49422144421606,3.2381761289831,1.29893002301434,2.47337702157238,8.59144860637751,3.84979432242953,10.1922095882658,14.2213340630666,3.030874574157,4.05375784760158,2.52762222507392,4.90990682791958,3.10725460376606,7.27366481417641,7.28638372417771,5.48037860961854,4.61230994512117,6.33035090321015,7.05532242814229,4.77533047052767,13.8429181931249,7.22996784599558,0.884610551949874,6.95597454773859,3.09178125844551,5.33362778448744,5.59175283654366,10.2473278954042,12.1479089951804,3.0654846625031,2.75574786363617,0,3.30382590389968,10.1857634795279,10.0650132620098,7.91622418311046,14.6012428961512,16.1100738118108,11.6361304953354,11.5191296778108,7.53611292492341,6.71797641294502,11.8779696463827,4.62972082950243,6.11566081924707,6.20735681970377,5.22180176435513,7.38453607395004,7.55205140579739,7.43059577652129,7.40243624021858,5.69147415625834,3.88022387279116,6.42960672570586,6.51019159406611,4.16471891612392,6.39508673218875,6.61679116392116,7.61393904709391,10.3497818745616,2.80885274925294,2.31613116403244,3.12579849335152,6.83515049367156,7.03578179943289,5.94204802821349,8.04932100989715,7.47704080640135,5.55361606394562,5.34828072925938,5.36546802799238,6.65562451492866,4.27855609775049,7.88003827579657,7.05298643048945,7.01759939641595,4.83010253640311,5.2340503316545,11.1453672738987,9.98174740079059,4.29544417878937,2.11560453330835,6.39864751605702,5.10920678092965,5.41243337552792,5.44545516483025,5.33707305227689,4.75564065281398,3.79623249235609,6.25856027951241,7.03738584640755,6.16765063327568,5.65395852645448,5.39291645192533,2.16138049874694,4.58024928485045,2.27601481143698,6.62641373136427,6.76246414038483,5.29493452397817,5.81857461502877,6.8031745293609,5.56481526693464,5.16635517928608,7.06494275286187,4.81248939295022,3.55743152504579,4.67166296005063,2.94838492669805,4.04751802292737,3.65148218499305,4.58236603529592,2.5462585178142,2.01387296215567,5.83686816390127,6.58947391651396,10.0637744569148,6.32639611036456,4.36852742360385,3.53610429125956,3.40855085691633,5.78932225636041,7.20537441649758,5.87423376488503,4.07412441105065,6.28056817368196,4.22442446919304,5.69521275302174,6.66522194480839,8.19561321002755,5.67486518782288,6.64394068946325,4.14582398509466,5.24362607090362,7.42545422023351,5.64131328467895,3.01582567878545,1.63171705145613,4.42587845717133,5.51873492609465,13.8073507389501,11.7211686592203,6.72133276044369,6.31177318010932,4.41711507182759,4.68526493155966,5.81643173878557,5.9742199488138,8.46634961513098,4.52922449262132,3.23848561339915,4.9683495844923,3.16230222357219,14.1381379225595,9.36804562374573,7.47875535402472,10.2618784392753,7.9185659026817,2.65490276679926,3.64170954232472,3.93020624054176,4.90373207365335,2.65771703592696,5.53383266299069,8.5281336745513,8.72480950746013,3.56497378384721,4.10847785316561,2.10837217149998,3.09406629744561,8.17055053809091,6.12207719706455,1.94038025674132,6.21577401591618,11.8817956540323,9.0968096977056,10.2020392773315,5.17590413494819,14.54964589995,23.3015277950202,3.52845436887939,5.27636009412736,5.00539722757307,5.66941494324665,5.72987251215055,7.2221995887827,6.99554007911642,13.1651964427462,3.2465467351592,4.33412422722767,4.25947412950337,4.52084296811258,4.92099219795691,6.17701067657611,2.88963330989554,4.3384950220334,4.69879910935041,0,7.43389584915668,4.26970880966382,4.86024033698106,3.13632444021703,2.62035076495413,4.98998081623837,5.53778153359751,5.49687478166462,5.57344385154709,5.59205381778233,8.45539408026285,17.9419855252775,11.913011312911,10.6948153589226,9.68698676082983,11.9958849098453,14.787012069365,13.6714604086148,18.0358072412223,13.5287107662563,6.33666013767304,5.37218905067903,4.86540516696394,3.49217254360413,3.24802057444488,4.833720783022,3.17890167650024,2.16351809135944,3.83992770653901,2.72609414859999,3.73413352609499,2.72230699869469,3.11865218367208,4.32953287381483,5.14258369598903,3.85441652145859,15.0950448294364,5.11368982674011,19.306730881869,5.21611903886914,6.56888664079137,5.12824547948342,4.71610433973945,7.52358156053045,13.5540442228096,9.66682996665071,12.0308057822273,8.76451229952807,8.90607275701835,15.107877947794,12.1504050041725,13.0593148935024,15.406841905463,14.497288729051,8.51056250190249,7.98049746802062,8.70741389346084,3.8897074730927,4.61148957781561,6.25067928730048,4.66718128383392,3.5025959730612,4.1719497246936,7.58091635291392,6.33698249725599,4.71565853465191,5.15028291084353,6.59459069770154,4.70970845436029,6.19181798667996,5.67833197129792,4.62982129112892,2.88460130562315,7.35994600671987,5.14303878578123,7.27650805253284,5.00715998889374,6.68593516508711,6.58765662907314,5.58456412085065,6.0366231048015,6.83981249738391,4.6173398707593,2.80571135828869,4.86403574309114,5.1222330835293,5.72923460437565,6.97215785336847,4.82266527452853,6.74488560432454,4.91256377735358,5.37177635120746,6.31251495827183,4.85301122062934,6.26043156175138 | ||
|short_description=p2@Usp9x | |short_description=p2@Usp9x | ||
}} | }} |
Latest revision as of 13:47, 1 October 2015
Short description: | p2@Usp9x |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp9x_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000169594, NM_009481, uc009srg.1, uc009srh.1, uc009sri.1_5end |
EntrezGene: | Usp9x |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 1.51e-09 | 24 |
reproductive structure | 4.56e-09 | 26 |
reproductive system | 4.56e-09 | 26 |
gonad | 1.02e-08 | 18 |
gonad primordium | 1.02e-08 | 18 |
structure with developmental contribution from neural crest | 2.52e-08 | 92 |
external genitalia | 2.90e-08 | 17 |
indifferent external genitalia | 2.90e-08 | 17 |
indifferent gonad | 2.90e-08 | 17 |
regional part of nervous system | 5.50e-08 | 54 |
male reproductive organ | 1.06e-07 | 15 |
ecto-epithelium | 1.80e-07 | 73 |
neurectoderm | 1.81e-07 | 64 |
neural plate | 1.81e-07 | 64 |
presumptive neural plate | 1.81e-07 | 64 |
testis | 3.37e-07 | 14 |
neural tube | 3.43e-07 | 52 |
neural rod | 3.43e-07 | 52 |
future spinal cord | 3.43e-07 | 52 |
neural keel | 3.43e-07 | 52 |
male organism | 8.34e-07 | 16 |
male reproductive system | 8.34e-07 | 16 |