FFCP PHASE1:Mm9::chr18:61265215..61265233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12978 | |EntrezGene=12978 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=150 | |||
|TSSclassifier=NA | |||
|UniProt=P09581,Q0P635,Q3UKC6,Q6NXV8 | |UniProt=P09581,Q0P635,Q3UKC6,Q6NXV8 | ||
|association_with_transcript=0bp_to_ENSMUST00000025523,NM_001037859,uc008fbn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000025523,NM_001037859,uc008fbn.1_5end | ||
|cluster_id=chr18:61265215..61265233,+ | |||
|description=CAGE_peak_2_at_Csf1r_5end | |description=CAGE_peak_2_at_Csf1r_5end | ||
|id=chr18:61265215..61265233,+ | |id=chr18:61265215..61265233,+ | ||
|ontology_enrichment_celltype=CL:0000349!5.96e-12!3;CL:0000351!5.96e-12!3 | |ontology_enrichment_celltype=CL:0000349!5.96e-12!3;CL:0000351!5.96e-12!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-37,3;CL:0000351,1.58e-37,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.82e-12!3;UBERON:0000478!2.82e-12!3;UBERON:0000158!2.82e-12!3;UBERON:0000358!5.96e-12!3;UBERON:0000307!5.96e-12!3;UBERON:0005795!3.36e-09!4;UBERON:0000995!3.36e-09!4;UBERON:0001987!9.06e-09!2;UBERON:0003124!9.06e-09!2;UBERON:0004340!9.06e-09!2;UBERON:0003975!1.97e-07!5;UBERON:0004175!6.97e-07!9 | |ontology_enrichment_uberon=UBERON:0005631!2.82e-12!3;UBERON:0000478!2.82e-12!3;UBERON:0000158!2.82e-12!3;UBERON:0000358!5.96e-12!3;UBERON:0000307!5.96e-12!3;UBERON:0005795!3.36e-09!4;UBERON:0000995!3.36e-09!4;UBERON:0001987!9.06e-09!2;UBERON:0003124!9.06e-09!2;UBERON:0004340!9.06e-09!2;UBERON:0003975!1.97e-07!5;UBERON:0004175!6.97e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.17e-38,3;UBERON:0000478,1.17e-38,3;UBERON:0000158,1.17e-38,3;UBERON:0000358,1.58e-37,3;UBERON:0000307,1.58e-37,3;UBERON:0007010,1.58e-37,3;UBERON:0005795,7.46e-29,4;UBERON:0000995,7.46e-29,4;UBERON:0001987,1.78e-26,2;UBERON:0003124,1.78e-26,2;UBERON:0004340,1.78e-26,2;UBERON:0003975,2.91e-23,5;UBERON:0003134,7.60e-15,8;UBERON:0000305,6.50e-14,1;UBERON:0006834,2.06e-13,1;UBERON:0004175,2.79e-13,9;UBERON:0000474,2.79e-13,9;UBERON:0003100,5.36e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.693152075409,173.490466037469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88581739386284,4.21655126064536,11.0803846800292,0,2.25218970541418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.693152075409,173.490466037469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88581739386284,4.21655126064536,11.0803846800292,0,2.25218970541418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.463735671240843 | ||
|short_description=p2@Csf1r | |short_description=p2@Csf1r | ||
}} | }} |
Latest revision as of 13:51, 1 October 2015
Short description: | p2@Csf1r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csf1r_5end |
Coexpression cluster: | MCL_coexpression_mm9:150 |
Association with transcript: | 0bp_to_ENSMUST00000025523, NM_001037859, uc008fbn.1_5end |
EntrezGene: | Csf1r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.58e-37 | 3 |
trophoblast cell | 1.58e-37 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.17e-38 | 3 |
extraembryonic structure | 1.17e-38 | 3 |
membranous layer | 1.17e-38 | 3 |
blastocyst | 1.58e-37 | 3 |
blastula | 1.58e-37 | 3 |
cleaving embryo | 1.58e-37 | 3 |
embryonic uterus | 7.46e-29 | 4 |
uterus | 7.46e-29 | 4 |
placenta | 1.78e-26 | 2 |
chorion | 1.78e-26 | 2 |
allantois | 1.78e-26 | 2 |
internal female genitalia | 2.91e-23 | 5 |
female reproductive organ | 7.60e-15 | 8 |
amnion | 6.50e-14 | 1 |
uterus or analog | 2.06e-13 | 1 |
internal genitalia | 2.79e-13 | 9 |
female reproductive system | 2.79e-13 | 9 |
female organism | 5.36e-11 | 11 |