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FFCP PHASE1:Mm9::chr11:4847994..4848012,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:4847994..4848012,- |short_description=p1@Nefh |description=CAGE_peak_1_at_Nefh_5end |association_with_transcript=54bp_to_ENSMUST00000020667,ENSMUST0000009...")
 
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{{FFCP
{{FFCP
|id=chr11:4847994..4848012,-
|DHSsupport=NA
|short_description=p1@Nefh
|DPIdataset=NA
|description=CAGE_peak_1_at_Nefh_5end
|association_with_transcript=54bp_to_ENSMUST00000020667,ENSMUST00000093369,NM_010904,uc007hvm.1_5end
|EntrezGene=380684
|EntrezGene=380684
|HGNC=
|HGNC=
|MCL_coexpression_id=218
|TSSclassifier=NA
|UniProt=F7A3A1,P19246,Q80TQ3
|UniProt=F7A3A1,P19246,Q80TQ3
|association_with_transcript=54bp_to_ENSMUST00000020667,ENSMUST00000093369,NM_010904,uc007hvm.1_5end
|cluster_id=chr11:4847994..4848012,-
|description=CAGE_peak_1_at_Nefh_5end
|id=chr11:4847994..4848012,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.60e-15!75;UBERON:0001016!5.60e-15!75;UBERON:0002346!2.47e-14!71;UBERON:0003075!2.47e-14!71;UBERON:0007284!2.47e-14!71;UBERON:0001017!2.83e-14!73;UBERON:0005743!2.83e-14!73;UBERON:0004121!1.08e-12!102;UBERON:0000924!1.08e-12!102;UBERON:0006601!1.08e-12!102;UBERON:0001049!1.54e-12!52;UBERON:0005068!1.54e-12!52;UBERON:0006241!1.54e-12!52;UBERON:0007135!1.54e-12!52;UBERON:0007811!4.24e-12!86;UBERON:0000955!2.27e-11!50;UBERON:0006238!2.27e-11!50;UBERON:0000033!4.93e-11!63;UBERON:0002616!7.24e-11!49;UBERON:0000153!8.99e-10!94;UBERON:0003056!3.30e-08!49;UBERON:0003080!3.56e-08!40;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39;UBERON:0002020!1.39e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.09e-19,75;UBERON:0001017,6.07e-18,73;UBERON:0000073,4.85e-17,54;UBERON:0001049,1.96e-15,52;UBERON:0005068,1.96e-15,52;UBERON:0006241,1.96e-15,52;UBERON:0007135,1.96e-15,52;UBERON:0002346,3.54e-15,64;UBERON:0003075,3.54e-15,64;UBERON:0007284,3.54e-15,64;UBERON:0004121,3.85e-14,95;UBERON:0000924,3.85e-14,95;UBERON:0006601,3.85e-14,95;UBERON:0010371,3.70e-13,73;UBERON:0000955,1.26e-11,47;UBERON:0006238,1.26e-11,47;UBERON:0002616,5.31e-11,46;UBERON:0003080,3.62e-09,40;UBERON:0010314,4.19e-09,92;UBERON:0002020,4.77e-09,34;UBERON:0002780,1.73e-08,39;UBERON:0001890,1.73e-08,39;UBERON:0006240,1.73e-08,39;UBERON:0002021,2.79e-08,10;UBERON:0000411,2.79e-08,10;UBERON:0001950,2.79e-08,10;UBERON:0003056,5.33e-08,49;UBERON:0003076,5.76e-08,12;UBERON:0003057,5.76e-08,12;UBERON:0002240,9.00e-07,6;UBERON:0005174,9.00e-07,6;UBERON:0001137,9.00e-07,6
|phase1_expression=4.80446541314382,0,0,0,0,0.16787927191189,0.233612640595526,2.1950964985068,44.348447477775,48.4513569486527,11.1291679346578,14.1994443011699,1.19840510951844,1.31130603628496,1.33243904726265,1.21485160433896,0.699561878128147,0.788655413395594,0.411343300817216,0,16.1582251287033,5.85816612085223,5.22399578277871,0,0,0,0,0.215471232685889,0,0,0,5.71527606113668,7.38077745101484,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,2.17608642603403,4.36921938885203,0,0,0,2.42779753031517,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,137.39812349823,99.8325805101293,0,0.0958454710182364,0,144.251804109199,135.987015060725,149.459156858325,1.97829431595291,0.731901148819277,0.52091337055676,265.782215049315,31.5147061617741,64.0224658184834,69.2377175863119,71.1858403995515,21.063137378259,2.87759534666099,4.38315048619356,1.15945795480671,0,0,0,0,0,9.69066498909088,0,0,0,14.3660288172214,0,0,0,0,0,0,2.8545969929765,0.776813650941515,0.593768556259299,1.38788261412909,1.21786191324856,1.61430848079241,1.80867168663147,0.352766121407114,0.879666139307728,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,69.0962680947251,47.1255090330274,0.510914110417183,0.479260498023681,0,0,137.957178891842,66.7950880115195,1.25654352112864,24.3354048269187,22.2472447877388,139.841353988584,74.6309810111685,0,0.248813941220186,0,5.05060454127538,0.130120442962704,0,0.360124259610698,0.30140963567143,0.476255494059295,0.512454881139399,1.87403449119458,31.3031078594209,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,25.4450837762594,0.411618449517138,0.660837565967596,0.264450566663544,0,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.581857461502877,0.140271639780637,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,409.082903288894,433.917663764336,0,0,3.15508219416257,3.51394869866975,4.52389135238878,0,0.668396022247182,0.283076530788832,2.42886421004937,1.75353514746787,0,17.6726724031994,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0,0.377210159511796,0.885905678642318,0,0.258428293168221,0,0,0,0,0,3.06395645178409,0.18006109403131,0.517434735131018,1.07168517515796,1.59606210278046,6.95638388648075,13.657568709976,16.745572201303,0,0.21183207086382,4.6310963591542,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,777.302866028057,2.05045056957423,0,0.370389054739423,0.753473828018764,1.36694227721025,0.915112692826091,1.01987057996313,1.81936888020755,1.38199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0.388902376688095,1.54991788173277,0.844780627453891,0.117357238645754,0.781226309063701,0.943734099831398,0,0,2.21207784439725,0.405450430580328,0.205421914329655,0.51968329191118,1.9692936523423,0.79472541912506,0.841368146639782,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,1.07203668813728,0.673482891482306,0.350630706544707,0,0.221985953374065,0.538283139656854,0,1.54551675225752,0.187682475451182,0,0.428736758158132,4.51414893631827,20.3310663342144,17.0320337507655,10.8850147553485,13.5764014051513,17.1270629942661,15.8632718451837,8.10027000278167,17.1122057225204,19.4851235863208,17.0860902878101,0,0,0.512200817262403,1.70174701947806,1.04806581313991,2.5738091183002,1.77797382241292,3.5025959730612,3.53011130550997,2.77966932940177,2.28131369901216,2.26351609663291,1.68554713445788,2.81710670581425,2.52716063404698,3.33405583898152,3.82418275618023,5.78727661391115,3.29668720642645,3.67997300335993,2.05721551431249,2.8396128985494,3.09967046931517,2.76158191601424,2.91739079287525,2.96151127620868,4.75612729469209,2.36762740294059,2.98769050460896,3.36685362994643,4.50813068871862,3.44765688314472,2.45538625901814,2.78886314134739,2.89359916471712,6.49507502638659,4.44470056046276,3.00819475667618,8.03410994689142,15.8825821766051,12.2889952878823
|phase1_expression=4.80446541314382,0,0,0,0,0.16787927191189,0.233612640595526,2.1950964985068,44.348447477775,48.4513569486527,11.1291679346578,14.1994443011699,1.19840510951844,1.31130603628496,1.33243904726265,1.21485160433896,0.699561878128147,0.788655413395594,0.411343300817216,0,16.1582251287033,5.85816612085223,5.22399578277871,0,0,0,0,0.215471232685889,0,0,0,5.71527606113668,7.38077745101484,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,2.17608642603403,4.36921938885203,0,0,0,2.42779753031517,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,137.39812349823,99.8325805101293,0,0.0958454710182364,0,144.251804109199,135.987015060725,149.459156858325,1.97829431595291,0.731901148819277,0.52091337055676,265.782215049315,31.5147061617741,64.0224658184834,69.2377175863119,71.1858403995515,21.063137378259,2.87759534666099,4.38315048619356,1.15945795480671,0,0,0,0,0,9.69066498909088,0,0,0,14.3660288172214,0,0,0,0,0,0,2.8545969929765,0.776813650941515,0.593768556259299,1.38788261412909,1.21786191324856,1.61430848079241,1.80867168663147,0.352766121407114,0.879666139307728,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,69.0962680947251,47.1255090330274,0.510914110417183,0.479260498023681,0,0,137.957178891842,66.7950880115195,1.25654352112864,24.3354048269187,22.2472447877388,139.841353988584,74.6309810111685,0,0.248813941220186,0,5.05060454127538,0.130120442962704,0,0.360124259610698,0.30140963567143,0.476255494059295,0.512454881139399,1.87403449119458,31.3031078594209,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,25.4450837762594,0.411618449517138,0.660837565967596,0.264450566663544,0,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.581857461502877,0.140271639780637,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,409.082903288894,433.917663764336,0,0,3.15508219416257,3.51394869866975,4.52389135238878,0,0.668396022247182,0.283076530788832,2.42886421004937,1.75353514746787,0,17.6726724031994,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0,0.377210159511796,0.885905678642318,0,0.258428293168221,0,0,0,0,0,3.06395645178409,0.18006109403131,0.517434735131018,1.07168517515796,1.59606210278046,6.95638388648075,13.657568709976,16.745572201303,0,0.21183207086382,4.6310963591542,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,777.302866028057,2.05045056957423,0,0.370389054739423,0.753473828018764,1.36694227721025,0.915112692826091,1.01987057996313,1.81936888020755,1.38199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0.388902376688095,1.54991788173277,0.844780627453891,0.117357238645754,0.781226309063701,0.943734099831398,0,0,2.21207784439725,0.405450430580328,0.205421914329655,0.51968329191118,1.9692936523423,0.79472541912506,0.841368146639782,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,1.07203668813728,0.673482891482306,0.350630706544707,0,0.221985953374065,0.538283139656854,0,1.54551675225752,0.187682475451182,0,0.428736758158132,4.51414893631827,20.3310663342144,17.0320337507655,10.8850147553485,13.5764014051513,17.1270629942661,15.8632718451837,8.10027000278167,17.1122057225204,19.4851235863208,17.0860902878101,0,0,0.512200817262403,1.70174701947806,1.04806581313991,2.5738091183002,1.77797382241292,3.5025959730612,3.53011130550997,2.77966932940177,2.28131369901216,2.26351609663291,1.68554713445788,2.81710670581425,2.52716063404698,3.33405583898152,3.82418275618023,5.78727661391115,3.29668720642645,3.67997300335993,2.05721551431249,2.8396128985494,3.09967046931517,2.76158191601424,2.91739079287525,2.96151127620868,4.75612729469209,2.36762740294059,2.98769050460896,3.36685362994643,4.50813068871862,3.44765688314472,2.45538625901814,2.78886314134739,2.89359916471712,6.49507502638659,4.44470056046276,3.00819475667618,8.03410994689142,15.8825821766051,12.2889952878823
|short_description=p1@Nefh
}}
}}

Latest revision as of 13:54, 1 October 2015

Short description:p1@Nefh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nefh_5end
Coexpression cluster:MCL_coexpression_mm9:218
Association with transcript: 54bp_to_ENSMUST00000020667, ENSMUST00000093369, NM_010904, uc007hvm.1_5end
EntrezGene:Nefh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nefh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E744.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F248.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1137.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D599.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3144.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3135.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7149.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4265.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I664.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D669.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F671.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.06
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B269.10
cerebellum, neonate N30.CNhs11135.1395-42I247.13
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4137.96
corpus striatum, adult.CNhs10487.19-21D866.80
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D524.34
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F2139.84
diencephalon, neonate N30.CNhs11201.1388-42B274.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A231.30
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E825.45
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2409.08
medulla oblongata, neonate N30.CNhs11200.1396-42A3433.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E916.75
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9777.30
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system7.09e-1975
central nervous system6.07e-1873
regional part of nervous system4.85e-1754
neural tube1.96e-1552
neural rod1.96e-1552
future spinal cord1.96e-1552
neural keel1.96e-1552
neurectoderm3.54e-1564
neural plate3.54e-1564
presumptive neural plate3.54e-1564
ectoderm-derived structure3.85e-1495
ectoderm3.85e-1495
presumptive ectoderm3.85e-1495
ecto-epithelium3.70e-1373
brain1.26e-1147
future brain1.26e-1147
regional part of brain5.31e-1146
anterior neural tube3.62e-0940
structure with developmental contribution from neural crest4.19e-0992
gray matter4.77e-0934
regional part of forebrain1.73e-0839
forebrain1.73e-0839
future forebrain1.73e-0839
occipital lobe2.79e-0810
visual cortex2.79e-0810
neocortex2.79e-0810
pre-chordal neural plate5.33e-0849
posterior neural tube5.76e-0812
chordal neural plate5.76e-0812
spinal cord9.00e-076
dorsal region element9.00e-076
dorsum9.00e-076
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