FFCP PHASE1:Mm9::chr13:38243280..38243291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109620 | |EntrezGene=109620 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1262 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q557 | |UniProt=E9Q557 | ||
|association_with_transcript=63bp_to_ENSMUST00000124830_5end | |association_with_transcript=63bp_to_ENSMUST00000124830_5end | ||
|cluster_id=chr13:38243280..38243291,+ | |||
|description=CAGE_peak_3_at_Dsp_5end | |description=CAGE_peak_3_at_Dsp_5end | ||
|id=chr13:38243280..38243291,+ | |id=chr13:38243280..38243291,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.98e-07!25 | |ontology_enrichment_celltype=CL:0000066!8.98e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.07e-07,25;CL:0002563,5.36e-07,9;CL:0002251,5.36e-07,9;CL:0000223,8.15e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.25e-14!130;UBERON:0000925!1.25e-14!130;UBERON:0006595!1.25e-14!130;UBERON:0001007!2.19e-14!128;UBERON:0001555!2.19e-14!128;UBERON:0007026!2.19e-14!128;UBERON:0004921!2.40e-13!126;UBERON:0004185!2.40e-13!126;UBERON:0000160!6.29e-12!43;UBERON:0005409!1.01e-11!59;UBERON:0000344!5.60e-10!15;UBERON:0001242!9.71e-09!13;UBERON:0000060!9.71e-09!13;UBERON:0001262!9.71e-09!13;UBERON:0004786!9.71e-09!13 | |ontology_enrichment_uberon=UBERON:0004119!1.25e-14!130;UBERON:0000925!1.25e-14!130;UBERON:0006595!1.25e-14!130;UBERON:0001007!2.19e-14!128;UBERON:0001555!2.19e-14!128;UBERON:0007026!2.19e-14!128;UBERON:0004921!2.40e-13!126;UBERON:0004185!2.40e-13!126;UBERON:0000160!6.29e-12!43;UBERON:0005409!1.01e-11!59;UBERON:0000344!5.60e-10!15;UBERON:0001242!9.71e-09!13;UBERON:0000060!9.71e-09!13;UBERON:0001262!9.71e-09!13;UBERON:0004786!9.71e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.56e-14,118;UBERON:0000925,5.56e-14,118;UBERON:0006595,5.56e-14,118;UBERON:0001007,9.74e-14,116;UBERON:0001555,9.74e-14,116;UBERON:0007026,9.74e-14,116;UBERON:0000160,1.58e-13,31;UBERON:0005409,1.09e-12,47;UBERON:0004921,1.18e-12,114;UBERON:0000344,6.51e-11,15;UBERON:0001242,1.55e-09,13;UBERON:0001262,1.55e-09,13;UBERON:0004786,1.55e-09,13;UBERON:0003350,5.36e-07,9;UBERON:0004808,5.36e-07,9;UBERON:0001277,5.36e-07,9 | |||
|phase1_expression=0.160148847104794,37.689344025051,41.8599300238373,43.5548464281835,39.5707626657614,24.6782529710478,19.6234618100242,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,32.4784618270616,30.5114343819336,26.988902313406,34.8917216888851,21.9780657339607,30.0237002741071,32.0078264795112,17.5167103417691,0,0,0,9.82095507154334,10.140313366868,11.4334839506927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,5.50742528533188,1.72084775396277,6.11974200336975,8.63525106620507,8.4470934268197,14.7848872742121,4.35377702408431,0,0,0,0.422530259330042,0,0,0,7.57718643539249,4.05375784760158,4.04419556011827,5.36664234679582,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.251333182659351,2.96633961281249,1.87979163995885,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.611036183101898,1.49288364732112,4.80173241023982,3.78795340595653,0.260240885925407,0,1.0803727788321,2.26057226753573,1.15662048557257,0.512454881139399,0.937017245597288,3.10444044886819,0,0.756424320671277,0.175951124163949,1.31517439456545,10.0097009721215,24.0293994900295,30.8673204611915,0.398068533636986,0,0,0,4.55676699578104,6.0976775595085,3.6012412292203,3.31442629819294,8.06733350164356,9.56456099901745,7.67362017676346,11.267482858784,15.0627291653649,17.7724637906559,20.5209330098869,44.5878452502207,36.8423968311837,39.079920521807,43.3486732596001,0.210289948564127,0.102904612379284,26.10308385572,16.3959351331397,0,0.232236671860439,1.15980715189884,1.61346819698674,3.11329261382818,4.37518940058886,19.9302205848695,8.07024878147653,8.79673230800943,11.3405189063456,8.77338392036041,21.5716658077013,19.4524244887225,22.5029638777435,0.189667900953082,0.571242563048644,0,1.4255592949172,0.581857461502877,0.841629838683823,1.20149420536089,1.03327103585722,0.470996183524124,0.987177311374404,5.33614728756868,0.500535317148282,0,0.449724224769707,0.608580364165509,0.72353147925725,1.52775511068852,2.5892652370573,0,1.64736847912849,5.75072826109418,4.46569137202204,5.30464044294753,4.2938409251009,4.84373016509163,6.27176577772377,2.03228509183265,0.189491411770485,0.162964976442026,0.848725428875941,1.87752198630802,1.67506257441816,1.42826184531608,2.34160377429359,1.41871629695572,0.44292937929755,2.23236676120482,3.27726629431476,1.03610989119537,3.03763023021174,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.41940085208269,0.178065603667255,1.46598263418218,1.81467135269789,5.30980553359851,0.485561272309963,0.604647113929502,1.32023555829129,1.47650946440386,2.45948118355142,4.65170927702798,0.363533729477506,0.712994756769443,1.8962205476149,4.21674434299995,6.18813259489121,2.04263763452273,0.540183282093931,0,0,0,0.535106452806212,0,0,1.64270195644597,3.38931313382112,3.96951116498931,83.1026714825059,37.621211420146,34.0768025844081,41.3028310250852,57.2851740110264,17.1973693611612,0,0,0.412773735926445,0,0,0,0,0,0,0,9.54670618015114,0.158167996790568,3.45643094115643,10.5845234005365,17.1452402731864,15.7221045897248,15.1048067950999,16.7786515122432,26.699106082371,17.3684064211002,15.5334828271731,0,0.598066184175915,0.330916980914195,0.194451188344048,0.129159823477731,0.506868376472335,0.821500670520278,0.651021924219751,0.104859344425711,0,0.288030006257865,3.47612232690996,1.41907650703115,2.67048488628551,2.7283372825337,2.68540043501222,2.78153896693771,3.60586348559907,2.65841148914239,1.71642964911851,1.143102099825,1.31074040677893,2.63136277997332,1.73181314952593,1.40252282617883,69.3794973862547,0.887943813496259,1.07656627931371,2.68615386182526,4.056981474676,0.563047426353546,4.39563898241436,100.96750654624,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,4.86213434136588,0.838452650511929,4.77993121970037,5.33392146723877,4.32673620201678,3.20919209591815,3.79045817645696,4.05566879824384,5.09291121742406,4.58843386602424,4.03358460150676,4.59483751644906,5.71552429539688,3.82418275618023,2.89363830695558,4.94503080963968,3.67997300335993,5.82877729055206,3.90446773550542,3.09967046931517,6.54058874845478,4.98779716201252,4.3153450024755,5.48783918618318,3.6829759601298,4.48153575691344,5.61142271657738,5.57584585183618,3.34915240076916,4.91077251803627,5.57772628269478,14.4679958235856,8.74337022782811,7.25187986180766,9.88406848622172,4.78220830172108,5.51478547798789,0.463735671240843 | |phase1_expression=0.160148847104794,37.689344025051,41.8599300238373,43.5548464281835,39.5707626657614,24.6782529710478,19.6234618100242,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,32.4784618270616,30.5114343819336,26.988902313406,34.8917216888851,21.9780657339607,30.0237002741071,32.0078264795112,17.5167103417691,0,0,0,9.82095507154334,10.140313366868,11.4334839506927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,5.50742528533188,1.72084775396277,6.11974200336975,8.63525106620507,8.4470934268197,14.7848872742121,4.35377702408431,0,0,0,0.422530259330042,0,0,0,7.57718643539249,4.05375784760158,4.04419556011827,5.36664234679582,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.251333182659351,2.96633961281249,1.87979163995885,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.611036183101898,1.49288364732112,4.80173241023982,3.78795340595653,0.260240885925407,0,1.0803727788321,2.26057226753573,1.15662048557257,0.512454881139399,0.937017245597288,3.10444044886819,0,0.756424320671277,0.175951124163949,1.31517439456545,10.0097009721215,24.0293994900295,30.8673204611915,0.398068533636986,0,0,0,4.55676699578104,6.0976775595085,3.6012412292203,3.31442629819294,8.06733350164356,9.56456099901745,7.67362017676346,11.267482858784,15.0627291653649,17.7724637906559,20.5209330098869,44.5878452502207,36.8423968311837,39.079920521807,43.3486732596001,0.210289948564127,0.102904612379284,26.10308385572,16.3959351331397,0,0.232236671860439,1.15980715189884,1.61346819698674,3.11329261382818,4.37518940058886,19.9302205848695,8.07024878147653,8.79673230800943,11.3405189063456,8.77338392036041,21.5716658077013,19.4524244887225,22.5029638777435,0.189667900953082,0.571242563048644,0,1.4255592949172,0.581857461502877,0.841629838683823,1.20149420536089,1.03327103585722,0.470996183524124,0.987177311374404,5.33614728756868,0.500535317148282,0,0.449724224769707,0.608580364165509,0.72353147925725,1.52775511068852,2.5892652370573,0,1.64736847912849,5.75072826109418,4.46569137202204,5.30464044294753,4.2938409251009,4.84373016509163,6.27176577772377,2.03228509183265,0.189491411770485,0.162964976442026,0.848725428875941,1.87752198630802,1.67506257441816,1.42826184531608,2.34160377429359,1.41871629695572,0.44292937929755,2.23236676120482,3.27726629431476,1.03610989119537,3.03763023021174,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.41940085208269,0.178065603667255,1.46598263418218,1.81467135269789,5.30980553359851,0.485561272309963,0.604647113929502,1.32023555829129,1.47650946440386,2.45948118355142,4.65170927702798,0.363533729477506,0.712994756769443,1.8962205476149,4.21674434299995,6.18813259489121,2.04263763452273,0.540183282093931,0,0,0,0.535106452806212,0,0,1.64270195644597,3.38931313382112,3.96951116498931,83.1026714825059,37.621211420146,34.0768025844081,41.3028310250852,57.2851740110264,17.1973693611612,0,0,0.412773735926445,0,0,0,0,0,0,0,9.54670618015114,0.158167996790568,3.45643094115643,10.5845234005365,17.1452402731864,15.7221045897248,15.1048067950999,16.7786515122432,26.699106082371,17.3684064211002,15.5334828271731,0,0.598066184175915,0.330916980914195,0.194451188344048,0.129159823477731,0.506868376472335,0.821500670520278,0.651021924219751,0.104859344425711,0,0.288030006257865,3.47612232690996,1.41907650703115,2.67048488628551,2.7283372825337,2.68540043501222,2.78153896693771,3.60586348559907,2.65841148914239,1.71642964911851,1.143102099825,1.31074040677893,2.63136277997332,1.73181314952593,1.40252282617883,69.3794973862547,0.887943813496259,1.07656627931371,2.68615386182526,4.056981474676,0.563047426353546,4.39563898241436,100.96750654624,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,4.86213434136588,0.838452650511929,4.77993121970037,5.33392146723877,4.32673620201678,3.20919209591815,3.79045817645696,4.05566879824384,5.09291121742406,4.58843386602424,4.03358460150676,4.59483751644906,5.71552429539688,3.82418275618023,2.89363830695558,4.94503080963968,3.67997300335993,5.82877729055206,3.90446773550542,3.09967046931517,6.54058874845478,4.98779716201252,4.3153450024755,5.48783918618318,3.6829759601298,4.48153575691344,5.61142271657738,5.57584585183618,3.34915240076916,4.91077251803627,5.57772628269478,14.4679958235856,8.74337022782811,7.25187986180766,9.88406848622172,4.78220830172108,5.51478547798789,0.463735671240843 | ||
|short_description=p3@Dsp | |short_description=p3@Dsp | ||
}} | }} |
Latest revision as of 13:59, 1 October 2015
Short description: | p3@Dsp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dsp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1262 |
Association with transcript: | 63bp_to_ENSMUST00000124830_5end |
EntrezGene: | Dsp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.07e-07 | 25 |
intestinal epithelial cell | 5.36e-07 | 9 |
epithelial cell of alimentary canal | 5.36e-07 | 9 |
endodermal cell | 8.15e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.56e-14 | 118 |
endoderm | 5.56e-14 | 118 |
presumptive endoderm | 5.56e-14 | 118 |
digestive system | 9.74e-14 | 116 |
digestive tract | 9.74e-14 | 116 |
primitive gut | 9.74e-14 | 116 |
intestine | 1.58e-13 | 31 |
gastrointestinal system | 1.09e-12 | 47 |
subdivision of digestive tract | 1.18e-12 | 114 |
mucosa | 6.51e-11 | 15 |
intestinal mucosa | 1.55e-09 | 13 |
wall of intestine | 1.55e-09 | 13 |
gastrointestinal system mucosa | 1.55e-09 | 13 |
epithelium of mucosa | 5.36e-07 | 9 |
gastrointestinal system epithelium | 5.36e-07 | 9 |
intestinal epithelium | 5.36e-07 | 9 |