FFCP PHASE1:Mm9::chr15:99468236..99468247,-: Difference between revisions
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|id=chr15:99468236..99468247,-
|short_description=p3@Racgap1
|description=CAGE_peak_3_at_Racgap1_5end
|association_with_transcript=451bp_to_ENSMUST00000171017_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26934 | |EntrezGene=26934 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=451bp_to_ENSMUST00000171017_5end | |||
|cluster_id=chr15:99468236..99468247,- | |||
|description=CAGE_peak_3_at_Racgap1_5end | |||
|id=chr15:99468236..99468247,- | |||
|ontology_enrichment_celltype=CL:0000540!2.40e-10!33;CL:0000047!2.40e-10!33;CL:0000031!2.40e-10!33;CL:0000404!2.40e-10!33;CL:0000117!3.03e-10!23;CL:0000337!3.03e-10!23;CL:0000393!3.47e-08!39;CL:0000211!3.47e-08!39;CL:0002613!3.39e-07!3;CL:0002319!4.31e-07!43;CL:0000221!7.50e-07!44;CL:0000133!7.50e-07!44 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.00e-10!73;UBERON:0005743!4.00e-10!73;UBERON:0003056!4.57e-10!49;UBERON:0000073!1.09e-09!75;UBERON:0001016!1.09e-09!75;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0003080!2.38e-09!40;UBERON:0002346!3.38e-09!71;UBERON:0003075!3.38e-09!71;UBERON:0007284!3.38e-09!71;UBERON:0002780!1.88e-08!39;UBERON:0001890!1.88e-08!39;UBERON:0006240!1.88e-08!39;UBERON:0007811!6.80e-08!86;UBERON:0000033!1.07e-07!63;UBERON:0004121!1.24e-07!102;UBERON:0000924!1.24e-07!102;UBERON:0006601!1.24e-07!102;UBERON:0000369!3.95e-07!5;UBERON:0002435!3.95e-07!5;UBERON:0000204!3.95e-07!5;UBERON:0010082!3.95e-07!5;UBERON:0002020!5.01e-07!34;UBERON:0002616!6.49e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.55e-26,8;UBERON:0003296,9.55e-26,8;UBERON:0010133,9.55e-26,8;UBERON:0001894,1.00e-20,10;UBERON:0006222,1.00e-20,10;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0003080,1.74e-11,40;UBERON:0002616,5.17e-10,46;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.07e-09,49;UBERON:0001049,7.09e-09,52;UBERON:0005068,7.09e-09,52;UBERON:0006241,7.09e-09,52;UBERON:0007135,7.09e-09,52;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.49e-08,54;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.979926393719632,1.0543001812006,0,0,0,0,0.791317726381163,0.731901148819277,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29254038639679,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0859367394735,0,0,0,0.177340233642274,1.78368817602071,2.30368628842969,3.95804433848979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.979926393719632,1.0543001812006,0,0,0,0,0.791317726381163,0.731901148819277,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29254038639679,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0859367394735,0,0,0,0.177340233642274,1.78368817602071,2.30368628842969,3.95804433848979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Racgap1 | |||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p3@Racgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Racgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | 451bp_to_ENSMUST00000171017_5end |
EntrezGene: | Racgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.55e-26 | 8 |
gland of diencephalon | 9.55e-26 | 8 |
neuroendocrine gland | 9.55e-26 | 8 |
diencephalon | 1.00e-20 | 10 |
future diencephalon | 1.00e-20 | 10 |
regional part of forebrain | 8.93e-12 | 39 |
forebrain | 8.93e-12 | 39 |
future forebrain | 8.93e-12 | 39 |
anterior neural tube | 1.74e-11 | 40 |
regional part of brain | 5.17e-10 | 46 |
brain | 8.37e-10 | 47 |
future brain | 8.37e-10 | 47 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
pre-chordal neural plate | 2.07e-09 | 49 |
neural tube | 7.09e-09 | 52 |
neural rod | 7.09e-09 | 52 |
future spinal cord | 7.09e-09 | 52 |
neural keel | 7.09e-09 | 52 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.49e-08 | 54 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |