FFCP PHASE1:Mm9::chrX:130811427..130811507,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215201 | |EntrezGene=215201 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BQJ6 | |UniProt=Q8BQJ6 | ||
|association_with_transcript=0bp_to_ENSMUST00000113252,ENSMUST00000145066_5end | |association_with_transcript=0bp_to_ENSMUST00000113252,ENSMUST00000145066_5end | ||
|cluster_id=chrX:130811427..130811507,- | |||
|description=CAGE_peak_1_at_Trmt2b_5end | |description=CAGE_peak_1_at_Trmt2b_5end | ||
|id=chrX:130811427..130811507,- | |id=chrX:130811427..130811507,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.96e-11!193;UBERON:0004120!3.96e-11!193;UBERON:0006603!3.96e-11!193;UBERON:0004921!7.84e-09!126;UBERON:0004185!7.84e-09!126;UBERON:0001007!8.19e-09!128;UBERON:0001555!8.19e-09!128;UBERON:0007026!8.19e-09!128;UBERON:0004535!1.12e-08!23;UBERON:0001009!1.12e-08!23;UBERON:0003914!1.79e-08!47;UBERON:0004119!3.39e-08!130;UBERON:0000925!3.39e-08!130;UBERON:0006595!3.39e-08!130;UBERON:0007100!6.56e-08!18;UBERON:0000948!6.56e-08!18;UBERON:0005498!6.56e-08!18;UBERON:0004140!6.56e-08!18;UBERON:0009881!6.56e-08!18;UBERON:0004141!6.56e-08!18;UBERON:0003084!6.56e-08!18;UBERON:0007005!6.56e-08!18;UBERON:0004139!6.56e-08!18;UBERON:0004291!6.56e-08!18;UBERON:0005409!3.59e-07!59;UBERON:0003104!4.43e-07!131;UBERON:0009142!4.43e-07!131 | |ontology_enrichment_uberon=UBERON:0000926!3.96e-11!193;UBERON:0004120!3.96e-11!193;UBERON:0006603!3.96e-11!193;UBERON:0004921!7.84e-09!126;UBERON:0004185!7.84e-09!126;UBERON:0001007!8.19e-09!128;UBERON:0001555!8.19e-09!128;UBERON:0007026!8.19e-09!128;UBERON:0004535!1.12e-08!23;UBERON:0001009!1.12e-08!23;UBERON:0003914!1.79e-08!47;UBERON:0004119!3.39e-08!130;UBERON:0000925!3.39e-08!130;UBERON:0006595!3.39e-08!130;UBERON:0007100!6.56e-08!18;UBERON:0000948!6.56e-08!18;UBERON:0005498!6.56e-08!18;UBERON:0004140!6.56e-08!18;UBERON:0009881!6.56e-08!18;UBERON:0004141!6.56e-08!18;UBERON:0003084!6.56e-08!18;UBERON:0007005!6.56e-08!18;UBERON:0004139!6.56e-08!18;UBERON:0004291!6.56e-08!18;UBERON:0005409!3.59e-07!59;UBERON:0003104!4.43e-07!131;UBERON:0009142!4.43e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.12e-08,23;UBERON:0001009,1.12e-08,23;UBERON:0003914,1.79e-08,47;UBERON:0004921,2.81e-08,114;UBERON:0001007,3.00e-08,116;UBERON:0001555,3.00e-08,116;UBERON:0007026,3.00e-08,116;UBERON:0007100,6.56e-08,18;UBERON:0000948,6.56e-08,18;UBERON:0005498,6.56e-08,18;UBERON:0004140,6.56e-08,18;UBERON:0009881,6.56e-08,18;UBERON:0004141,6.56e-08,18;UBERON:0003084,6.56e-08,18;UBERON:0007005,6.56e-08,18;UBERON:0004139,6.56e-08,18;UBERON:0004291,6.56e-08,18;UBERON:0004119,1.24e-07,118;UBERON:0000925,1.24e-07,118;UBERON:0006595,1.24e-07,118;UBERON:0005409,4.34e-07,47 | |||
|phase1_expression=13.1322054625931,13.6100408979351,13.6499771816861,28.1291716515352,26.0465779572101,16.6200479192771,20.5579123724063,37.7040104449403,3.23814060948833,2.80877431586392,4.28044920563762,5.02564601670619,30.816131387617,35.055581370018,16.6554880907831,22.2722794128809,13.9912375625629,45.5842828942653,42.3683599841733,32.2536135366503,18.7095238332354,38.0284343099391,38.1351692142846,30.2385679079539,21.3350631392468,17.2269589234506,17.6612418425221,20.2542958724736,28.1234660795433,24.6989527164732,14.4124831925948,13.9706748161119,20.2971379902908,15.8481681015439,31.4848265528889,29.5897668738116,31.0337421518801,27.6230876286359,24.2213956802378,24.0820922227947,22.9410280332096,28.6879103682547,20.3914348273085,31.2224108579432,35.4819259268301,24.9623582939887,6.25913075478431,12.8634842264463,12.0827400503959,13.8045228342741,20.2980311356776,7.18762821824858,33.0531733933741,19.5847778343063,28.5679729271094,15.1783067261209,16.9054729563866,23.2052441524849,4.24864567805155,3.70293685490423,3.80298842103708,9.4876468979357,9.78224275722253,11.6986963246582,4.94433181283487,12.0781619540837,7.78960287347852,3.84218305321555,7.77672092313582,4.86021377994086,5.67877395648731,11.1403883917483,10.6016899656774,5.14461356702807,4.60058260887535,3.67687514644008,23.1243350098716,20.3022867555448,22.5801603886678,2.50583946687368,4.48289453651807,0.52091337055676,22.3346399201105,28.7008931116157,18.7941844765476,8.54422897873636,10.3931326983345,5.59198337475902,4.01348824665875,13.3005945787943,31.5952292684829,37.858650587181,15.6393406752783,30.2233787317178,27.9403859502498,29.1217476613268,36.9368824946507,28.6322941931137,22.6013824004496,19.4336765980687,14.3660288172214,10.2661181931454,0,0,19.9171757730317,18.2419103142071,16.1767822404731,28.4317860500459,71.2079180029722,55.8142442883741,16.3076207160168,33.4912026143355,29.7493991460315,34.3647620459979,38.4515072333755,41.0929753648039,10.8765785803125,79.9634443767111,48.6535803572431,23.9414937922166,19.654895142975,25.2135131630315,55.9175283654366,29.5708604981663,21.9919042154128,40.3622147229574,23.8432097766781,20.9965955847693,29.480292680951,35.6501721783478,21.9600289352941,4.64921102817598,17.0347833788431,13.5529192385075,30.5448425502553,20.6046404096052,19.1458004038595,31.5993705349636,34.6230179054134,25.0425808504904,18.7373437866293,15.6333431014762,17.1059023315082,21.2493793148358,15.4442853073514,20.1138540847214,14.523767306758,29.4921842642478,15.7364634840975,16.8304411349359,16.8913079197391,20.1660073833369,31.9754336609438,38.6559904839605,36.217656007798,14.3304672109315,30.8973802417823,34.7419674604865,27.8480229407681,41.2180287345649,49.7195247159924,48.436694533013,50.1898839440646,60.0130906829582,64.1751189611494,74.8759302096313,57.9470547023177,49.7420358484142,57.5959474697182,62.5478038141353,64.8550476366846,72.2227937881142,77.5011906977409,74.7529752495271,17.0334858336943,6.07137213037778,52.5365864944239,29.618463466317,24.3148605610167,27.8684006232526,35.8251542475419,35.899667382955,39.5832918043869,39.9473814836374,39.860441169739,40.0218459979346,41.7216446608447,49.3412050662054,42.5021709919682,38.6492345721315,46.4696807230593,39.031689557856,29.9675283505869,22.6212054967263,25.9227792048085,32.380561127405,32.5840178441611,22.5837340046826,38.5110511086727,48.7113488332687,54.6355572887984,46.7675251263624,48.3217782152053,25.5273011745624,17.8868685553015,24.2851081375642,19.2717115319078,20.9824128984603,25.462585178142,24.1664755458681,32.5891805817821,28.0052641451843,34.5043695665651,30.1434167611488,44.3093495822676,38.1394105700139,47.7197119968286,35.7008205808892,31.9623018988226,18.380666941737,23.4669566076517,24.4432923516271,31.9178737672363,34.0037702606886,30.9456733151818,17.1717610114863,29.1625016596453,24.1396511717165,21.0480294627883,27.6929001869597,32.8101465545202,27.7726192476502,27.142431109069,26.1074728232981,30.4893849271802,21.2471294654644,35.3211297973142,32.5848488726325,19.0164536636943,29.2866275557073,16.4064274096453,16.0079885161622,20.8960695800815,19.3564726341567,17.1554979043443,15.5692091933858,20.2405350837447,19.5811424800579,17.392662229647,29.2402397943844,47.4079884595617,22.7923972694087,21.0124177566113,42.0673813579965,25.2215762845929,31.0759214278376,22.6742667723563,31.8742584787468,26.8724722521503,27.6691633149535,21.4495483329624,19.9943551212628,35.2932404600874,31.2876390356458,28.4630243152497,33.0033738394198,55.1512161321137,17.2858650270058,21.2148241403717,15.8609405923378,27.1330557472679,20.8691516594423,21.8850197400821,20.0946866415636,18.0697215209057,12.2862601101016,22.2733682035512,31.1635018059397,26.6416304048244,24.7886121454721,23.635724112621,21.9948805658382,37.8925087618806,32.8202784558602,28.3645662124435,24.3536504196603,29.4459298517842,31.6459007767881,27.8856224550891,23.5641518402718,36.2054055886912,31.908931129794,34.5499934511059,63.0082607889975,25.623215480072,34.7676288786911,30.2414954301044,35.3359220264452,40.8337994205352,42.3474047648337,35.4583325061691,37.6928556457003,46.1429304918783,41.0083946637371,7.32800820289447,22.5769984526408,17.2076830075382,24.8897521080381,27.2527227538013,28.21567295696,27.1095221271692,24.0878111961308,30.1994911946047,17.1524725786464,9.50499020650956,42.3454901641759,26.5570032030115,32.8675062927447,33.9093347972045,33.477992089819,36.9547319893153,33.5345304160713,34.7070388860256,34.4295594323183,32.8451336683049,39.9271693141888,41.322141433655,38.9657958643334,45.815745655175,40.811469050738,4.43971906748129,3.94740969081693,5.70807695637867,56.4113614573996,25.3371341859096,35.1651118593149,22.723048182381,46.6462056752888,6.21227026878773,9.20650473014354,12.6037012956667,6.35856774671644,13.7016503954128,10.5755145634558,12.8254275044043,8.10578165803597,8.60970577069989,17.6038505995619,10.4825221060018,12.369771075432,13.3172212488225,25.7693120092392,19.7036372870303,18.9358813703515,26.6696073361938,27.4026626127729,23.1061830906107,19.7103825175762,27.3757643881459,26.0304351112785,25.2832070168682,25.0338345903039,22.2275264858223,28.1013277857013,21.0909473219637,21.4129234714713,18.1317796353455,21.491042339622,25.7151939289062,28.396128985494,24.3204913746267,26.5983942437161,22.77447006051,24.7920801122612,25.7928441750609,29.2007379696006,22.2718746707213,31.9851094844911,20.5238581354821,18.6173471689815,23.735400503842,21.3812840836633,29.7076180910958,16.4874981439044,29.241451055676,24.0655580534094,26.0152131613627,25.8091960369833,29.2153472881731 | |phase1_expression=13.1322054625931,13.6100408979351,13.6499771816861,28.1291716515352,26.0465779572101,16.6200479192771,20.5579123724063,37.7040104449403,3.23814060948833,2.80877431586392,4.28044920563762,5.02564601670619,30.816131387617,35.055581370018,16.6554880907831,22.2722794128809,13.9912375625629,45.5842828942653,42.3683599841733,32.2536135366503,18.7095238332354,38.0284343099391,38.1351692142846,30.2385679079539,21.3350631392468,17.2269589234506,17.6612418425221,20.2542958724736,28.1234660795433,24.6989527164732,14.4124831925948,13.9706748161119,20.2971379902908,15.8481681015439,31.4848265528889,29.5897668738116,31.0337421518801,27.6230876286359,24.2213956802378,24.0820922227947,22.9410280332096,28.6879103682547,20.3914348273085,31.2224108579432,35.4819259268301,24.9623582939887,6.25913075478431,12.8634842264463,12.0827400503959,13.8045228342741,20.2980311356776,7.18762821824858,33.0531733933741,19.5847778343063,28.5679729271094,15.1783067261209,16.9054729563866,23.2052441524849,4.24864567805155,3.70293685490423,3.80298842103708,9.4876468979357,9.78224275722253,11.6986963246582,4.94433181283487,12.0781619540837,7.78960287347852,3.84218305321555,7.77672092313582,4.86021377994086,5.67877395648731,11.1403883917483,10.6016899656774,5.14461356702807,4.60058260887535,3.67687514644008,23.1243350098716,20.3022867555448,22.5801603886678,2.50583946687368,4.48289453651807,0.52091337055676,22.3346399201105,28.7008931116157,18.7941844765476,8.54422897873636,10.3931326983345,5.59198337475902,4.01348824665875,13.3005945787943,31.5952292684829,37.858650587181,15.6393406752783,30.2233787317178,27.9403859502498,29.1217476613268,36.9368824946507,28.6322941931137,22.6013824004496,19.4336765980687,14.3660288172214,10.2661181931454,0,0,19.9171757730317,18.2419103142071,16.1767822404731,28.4317860500459,71.2079180029722,55.8142442883741,16.3076207160168,33.4912026143355,29.7493991460315,34.3647620459979,38.4515072333755,41.0929753648039,10.8765785803125,79.9634443767111,48.6535803572431,23.9414937922166,19.654895142975,25.2135131630315,55.9175283654366,29.5708604981663,21.9919042154128,40.3622147229574,23.8432097766781,20.9965955847693,29.480292680951,35.6501721783478,21.9600289352941,4.64921102817598,17.0347833788431,13.5529192385075,30.5448425502553,20.6046404096052,19.1458004038595,31.5993705349636,34.6230179054134,25.0425808504904,18.7373437866293,15.6333431014762,17.1059023315082,21.2493793148358,15.4442853073514,20.1138540847214,14.523767306758,29.4921842642478,15.7364634840975,16.8304411349359,16.8913079197391,20.1660073833369,31.9754336609438,38.6559904839605,36.217656007798,14.3304672109315,30.8973802417823,34.7419674604865,27.8480229407681,41.2180287345649,49.7195247159924,48.436694533013,50.1898839440646,60.0130906829582,64.1751189611494,74.8759302096313,57.9470547023177,49.7420358484142,57.5959474697182,62.5478038141353,64.8550476366846,72.2227937881142,77.5011906977409,74.7529752495271,17.0334858336943,6.07137213037778,52.5365864944239,29.618463466317,24.3148605610167,27.8684006232526,35.8251542475419,35.899667382955,39.5832918043869,39.9473814836374,39.860441169739,40.0218459979346,41.7216446608447,49.3412050662054,42.5021709919682,38.6492345721315,46.4696807230593,39.031689557856,29.9675283505869,22.6212054967263,25.9227792048085,32.380561127405,32.5840178441611,22.5837340046826,38.5110511086727,48.7113488332687,54.6355572887984,46.7675251263624,48.3217782152053,25.5273011745624,17.8868685553015,24.2851081375642,19.2717115319078,20.9824128984603,25.462585178142,24.1664755458681,32.5891805817821,28.0052641451843,34.5043695665651,30.1434167611488,44.3093495822676,38.1394105700139,47.7197119968286,35.7008205808892,31.9623018988226,18.380666941737,23.4669566076517,24.4432923516271,31.9178737672363,34.0037702606886,30.9456733151818,17.1717610114863,29.1625016596453,24.1396511717165,21.0480294627883,27.6929001869597,32.8101465545202,27.7726192476502,27.142431109069,26.1074728232981,30.4893849271802,21.2471294654644,35.3211297973142,32.5848488726325,19.0164536636943,29.2866275557073,16.4064274096453,16.0079885161622,20.8960695800815,19.3564726341567,17.1554979043443,15.5692091933858,20.2405350837447,19.5811424800579,17.392662229647,29.2402397943844,47.4079884595617,22.7923972694087,21.0124177566113,42.0673813579965,25.2215762845929,31.0759214278376,22.6742667723563,31.8742584787468,26.8724722521503,27.6691633149535,21.4495483329624,19.9943551212628,35.2932404600874,31.2876390356458,28.4630243152497,33.0033738394198,55.1512161321137,17.2858650270058,21.2148241403717,15.8609405923378,27.1330557472679,20.8691516594423,21.8850197400821,20.0946866415636,18.0697215209057,12.2862601101016,22.2733682035512,31.1635018059397,26.6416304048244,24.7886121454721,23.635724112621,21.9948805658382,37.8925087618806,32.8202784558602,28.3645662124435,24.3536504196603,29.4459298517842,31.6459007767881,27.8856224550891,23.5641518402718,36.2054055886912,31.908931129794,34.5499934511059,63.0082607889975,25.623215480072,34.7676288786911,30.2414954301044,35.3359220264452,40.8337994205352,42.3474047648337,35.4583325061691,37.6928556457003,46.1429304918783,41.0083946637371,7.32800820289447,22.5769984526408,17.2076830075382,24.8897521080381,27.2527227538013,28.21567295696,27.1095221271692,24.0878111961308,30.1994911946047,17.1524725786464,9.50499020650956,42.3454901641759,26.5570032030115,32.8675062927447,33.9093347972045,33.477992089819,36.9547319893153,33.5345304160713,34.7070388860256,34.4295594323183,32.8451336683049,39.9271693141888,41.322141433655,38.9657958643334,45.815745655175,40.811469050738,4.43971906748129,3.94740969081693,5.70807695637867,56.4113614573996,25.3371341859096,35.1651118593149,22.723048182381,46.6462056752888,6.21227026878773,9.20650473014354,12.6037012956667,6.35856774671644,13.7016503954128,10.5755145634558,12.8254275044043,8.10578165803597,8.60970577069989,17.6038505995619,10.4825221060018,12.369771075432,13.3172212488225,25.7693120092392,19.7036372870303,18.9358813703515,26.6696073361938,27.4026626127729,23.1061830906107,19.7103825175762,27.3757643881459,26.0304351112785,25.2832070168682,25.0338345903039,22.2275264858223,28.1013277857013,21.0909473219637,21.4129234714713,18.1317796353455,21.491042339622,25.7151939289062,28.396128985494,24.3204913746267,26.5983942437161,22.77447006051,24.7920801122612,25.7928441750609,29.2007379696006,22.2718746707213,31.9851094844911,20.5238581354821,18.6173471689815,23.735400503842,21.3812840836633,29.7076180910958,16.4874981439044,29.241451055676,24.0655580534094,26.0152131613627,25.8091960369833,29.2153472881731 | ||
|short_description=p1@Trmt2b | |short_description=p1@Trmt2b | ||
}} | }} |
Latest revision as of 14:08, 1 October 2015
Short description: | p1@Trmt2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trmt2b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000113252, ENSMUST00000145066_5end |
EntrezGene: | Trmt2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.12e-08 | 23 |
circulatory system | 1.12e-08 | 23 |
epithelial tube | 1.79e-08 | 47 |
subdivision of digestive tract | 2.81e-08 | 114 |
digestive system | 3.00e-08 | 116 |
digestive tract | 3.00e-08 | 116 |
primitive gut | 3.00e-08 | 116 |
primary circulatory organ | 6.56e-08 | 18 |
heart | 6.56e-08 | 18 |
primitive heart tube | 6.56e-08 | 18 |
primary heart field | 6.56e-08 | 18 |
anterior lateral plate mesoderm | 6.56e-08 | 18 |
heart tube | 6.56e-08 | 18 |
heart primordium | 6.56e-08 | 18 |
cardiac mesoderm | 6.56e-08 | 18 |
cardiogenic plate | 6.56e-08 | 18 |
heart rudiment | 6.56e-08 | 18 |
endoderm-derived structure | 1.24e-07 | 118 |
endoderm | 1.24e-07 | 118 |
presumptive endoderm | 1.24e-07 | 118 |
gastrointestinal system | 4.34e-07 | 47 |