FFCP PHASE1:Mm9::chr16:10489852..10489897,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12265 | |EntrezGene=12265 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=E9PZ37,P79621 | |UniProt=E9PZ37,P79621 | ||
|association_with_transcript=0bp_to_ENSMUST00000100186,NM_001243761,uc007ydv.1,uc007ydw.1_5end | |association_with_transcript=0bp_to_ENSMUST00000100186,NM_001243761,uc007ydv.1,uc007ydw.1_5end | ||
|cluster_id=chr16:10489852..10489897,+ | |||
|description=CAGE_peak_2_at_Ciita_5end | |description=CAGE_peak_2_at_Ciita_5end | ||
|id=chr16:10489852..10489897,+ | |id=chr16:10489852..10489897,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.20e-08!9;CL:0002251!2.20e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.21e-16,9;CL:0002251,6.21e-16,9;CL:0000239,1.31e-10,6;CL:0000677,1.31e-10,6;CL:0000584,1.31e-10,6;CL:0000075,5.66e-09,7;CL:0002076,9.08e-09,15;CL:0002250,6.45e-07,3;CL:0000066,8.76e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.20e-13!15;UBERON:0001242!1.48e-11!13;UBERON:0000060!1.48e-11!13;UBERON:0001262!1.48e-11!13;UBERON:0004786!1.48e-11!13;UBERON:0004923!1.24e-09!24;UBERON:0002193!1.83e-08!48;UBERON:0003350!2.20e-08!9;UBERON:0004808!2.20e-08!9;UBERON:0001277!2.20e-08!9;UBERON:0005911!3.05e-08!69;UBERON:0001007!1.16e-07!128;UBERON:0001555!1.16e-07!128;UBERON:0007026!1.16e-07!128;UBERON:0004119!2.96e-07!130;UBERON:0000925!2.96e-07!130;UBERON:0006595!2.96e-07!130;UBERON:0002390!4.78e-07!45;UBERON:0003061!4.78e-07!45;UBERON:0004921!6.26e-07!126;UBERON:0004185!6.26e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.42e-22,15;UBERON:0001242,8.99e-20,13;UBERON:0001262,8.99e-20,13;UBERON:0004786,8.99e-20,13;UBERON:0005911,2.78e-18,69;UBERON:0001007,2.17e-16,116;UBERON:0001555,2.17e-16,116;UBERON:0007026,2.17e-16,116;UBERON:0004119,6.07e-16,118;UBERON:0000925,6.07e-16,118;UBERON:0006595,6.07e-16,118;UBERON:0003350,6.21e-16,9;UBERON:0004808,6.21e-16,9;UBERON:0001277,6.21e-16,9;UBERON:0004921,9.99e-15,114;UBERON:0000065,1.12e-14,41;UBERON:0002193,1.90e-14,48;UBERON:0002405,1.90e-14,48;UBERON:0004923,2.03e-14,24;UBERON:0001004,3.40e-14,42;UBERON:0003929,7.93e-14,55;UBERON:0002370,3.38e-13,23;UBERON:0000974,3.38e-13,23;UBERON:0004807,3.38e-13,23;UBERON:0005058,3.38e-13,23;UBERON:0003351,3.38e-13,23;UBERON:0009113,3.38e-13,23;UBERON:0003295,3.38e-13,23;UBERON:0009722,3.38e-13,23;UBERON:0005562,3.38e-13,23;UBERON:0007690,3.38e-13,23;UBERON:0000485,1.14e-12,11;UBERON:0006562,1.70e-12,24;UBERON:0003408,1.70e-12,24;UBERON:0001557,1.70e-12,24;UBERON:0001042,1.70e-12,24;UBERON:0008814,1.70e-12,24;UBERON:0009145,1.70e-12,24;UBERON:0002390,1.29e-11,45;UBERON:0003061,1.29e-11,45;UBERON:0004177,3.36e-11,29;UBERON:0005057,3.36e-11,29;UBERON:0000072,1.04e-10,27;UBERON:0000160,1.67e-10,31;UBERON:0000490,1.81e-10,66;UBERON:0000077,1.24e-08,35;UBERON:0007811,3.56e-07,36 | |||
|phase1_expression=0,5.23463111459042,1.81999695755814,20.2651021575576,9.01612313903425,1.84667199103079,3.50418960893289,0,0,0,0,0,0,0,0,0.607425802169478,0,3.15462165358238,2.4680598049033,1.69755860719212,1.87095238332354,0,0,1.59992422793407,2.75291137280604,0.57423196411502,2.58457197695445,3.23206849028834,17.8622014288991,24.9509828462331,0.665191531965914,0,0,0,10.9763615505484,8.31173226792462,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,2.07150306917737,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0.292780797011547,0,27.8448190177365,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,30.0681092515256,0.528901133327089,0,0,0,0,0,0,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0,0,0.407302655690628,0.581857461502877,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0,0.889357881261447,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,1.11642284300551,0,0,0.179397413521912,0.482443521363367,10.7156850296631,0,0,0,0,0.502518772325447,0.238043640886014,0,1.26108115284953,1.7717175171902,2.55127629851979,2.94953966488328,3.7990696010497,3.32692834737477,10.5553898757491,6.52686820582452,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.238744688006273,0,0.874442509889552,0,2.05045056957423,0,0,0.376736914009382,0.546776910884101,0.457556346413045,0.339956859987711,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0.41326727862668,0,0.518459893167171,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.506868376472335,0.58678619322877,0.13020438484395,0,0,0,8.84831137758899,3.24360344464263,6.67621221571377,7.66532855568991,8.05620130503666,5.16571522431289,5.88957702647847,7.97523446742717,5.45218829719997,6.93481940560499,5.14213544197887,6.04238860586465,4.52195655709548,4.67507608726276,0,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | |phase1_expression=0,5.23463111459042,1.81999695755814,20.2651021575576,9.01612313903425,1.84667199103079,3.50418960893289,0,0,0,0,0,0,0,0,0.607425802169478,0,3.15462165358238,2.4680598049033,1.69755860719212,1.87095238332354,0,0,1.59992422793407,2.75291137280604,0.57423196411502,2.58457197695445,3.23206849028834,17.8622014288991,24.9509828462331,0.665191531965914,0,0,0,10.9763615505484,8.31173226792462,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,2.07150306917737,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0.292780797011547,0,27.8448190177365,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,30.0681092515256,0.528901133327089,0,0,0,0,0,0,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0,0,0.407302655690628,0.581857461502877,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0,0.889357881261447,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,1.11642284300551,0,0,0.179397413521912,0.482443521363367,10.7156850296631,0,0,0,0,0.502518772325447,0.238043640886014,0,1.26108115284953,1.7717175171902,2.55127629851979,2.94953966488328,3.7990696010497,3.32692834737477,10.5553898757491,6.52686820582452,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.238744688006273,0,0.874442509889552,0,2.05045056957423,0,0,0.376736914009382,0.546776910884101,0.457556346413045,0.339956859987711,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0.41326727862668,0,0.518459893167171,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.506868376472335,0.58678619322877,0.13020438484395,0,0,0,8.84831137758899,3.24360344464263,6.67621221571377,7.66532855568991,8.05620130503666,5.16571522431289,5.88957702647847,7.97523446742717,5.45218829719997,6.93481940560499,5.14213544197887,6.04238860586465,4.52195655709548,4.67507608726276,0,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | ||
|short_description=p2@Ciita | |short_description=p2@Ciita | ||
}} | }} |
Latest revision as of 14:34, 1 October 2015
Short description: | p2@Ciita |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ciita_5end |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | 0bp_to_ENSMUST00000100186, NM_001243761, uc007ydv.1, uc007ydw.1_5end |
EntrezGene: | Ciita |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.21e-16 | 9 |
epithelial cell of alimentary canal | 6.21e-16 | 9 |
brush border epithelial cell | 1.31e-10 | 6 |
gut absorptive cell | 1.31e-10 | 6 |
enterocyte | 1.31e-10 | 6 |
columnar/cuboidal epithelial cell | 5.66e-09 | 7 |
endo-epithelial cell | 9.08e-09 | 15 |
intestinal crypt stem cell | 6.45e-07 | 3 |
epithelial cell | 8.76e-07 | 25 |