FFCP PHASE1:Mm9::chr8:120807689..120807703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12554 | |EntrezGene=12554 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3659 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000129548,ENSMUST00000148836_5end | |association_with_transcript=0bp_to_ENSMUST00000129548,ENSMUST00000148836_5end | ||
|cluster_id=chr8:120807689..120807703,+ | |||
|description=CAGE_peak_1_at_Cdh13_5end | |description=CAGE_peak_1_at_Cdh13_5end | ||
|id=chr8:120807689..120807703,+ | |id=chr8:120807689..120807703,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.23e-09!34;UBERON:0007100!5.29e-08!18;UBERON:0000948!5.29e-08!18;UBERON:0005498!5.29e-08!18;UBERON:0004140!5.29e-08!18;UBERON:0009881!5.29e-08!18;UBERON:0004141!5.29e-08!18;UBERON:0003084!5.29e-08!18;UBERON:0007005!5.29e-08!18;UBERON:0004139!5.29e-08!18;UBERON:0004291!5.29e-08!18;UBERON:0002791!7.44e-08!29;UBERON:0003528!7.44e-08!29;UBERON:0001893!7.44e-08!29;UBERON:0001049!1.35e-07!52;UBERON:0005068!1.35e-07!52;UBERON:0006241!1.35e-07!52;UBERON:0007135!1.35e-07!52;UBERON:0000479!1.49e-07!349;UBERON:0000956!1.93e-07!21;UBERON:0001869!1.93e-07!21;UBERON:0000203!1.93e-07!21;UBERON:0004111!3.16e-07!122;UBERON:0004121!6.38e-07!102;UBERON:0000924!6.38e-07!102;UBERON:0006601!6.38e-07!102;UBERON:0003080!8.82e-07!40;UBERON:0003103!9.49e-07!43 | |ontology_enrichment_uberon=UBERON:0002020!2.23e-09!34;UBERON:0007100!5.29e-08!18;UBERON:0000948!5.29e-08!18;UBERON:0005498!5.29e-08!18;UBERON:0004140!5.29e-08!18;UBERON:0009881!5.29e-08!18;UBERON:0004141!5.29e-08!18;UBERON:0003084!5.29e-08!18;UBERON:0007005!5.29e-08!18;UBERON:0004139!5.29e-08!18;UBERON:0004291!5.29e-08!18;UBERON:0002791!7.44e-08!29;UBERON:0003528!7.44e-08!29;UBERON:0001893!7.44e-08!29;UBERON:0001049!1.35e-07!52;UBERON:0005068!1.35e-07!52;UBERON:0006241!1.35e-07!52;UBERON:0007135!1.35e-07!52;UBERON:0000479!1.49e-07!349;UBERON:0000956!1.93e-07!21;UBERON:0001869!1.93e-07!21;UBERON:0000203!1.93e-07!21;UBERON:0004111!3.16e-07!122;UBERON:0004121!6.38e-07!102;UBERON:0000924!6.38e-07!102;UBERON:0006601!6.38e-07!102;UBERON:0003080!8.82e-07!40;UBERON:0003103!9.49e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.48e-10,92;UBERON:0002020,1.57e-09,34;UBERON:0010371,1.34e-08,73;UBERON:0007100,3.96e-08,18;UBERON:0000948,3.96e-08,18;UBERON:0005498,3.96e-08,18;UBERON:0004140,3.96e-08,18;UBERON:0009881,3.96e-08,18;UBERON:0004141,3.96e-08,18;UBERON:0003084,3.96e-08,18;UBERON:0007005,3.96e-08,18;UBERON:0004139,3.96e-08,18;UBERON:0004291,3.96e-08,18;UBERON:0003528,5.61e-08,29;UBERON:0002791,5.61e-08,29;UBERON:0001893,5.61e-08,29;UBERON:0000956,1.48e-07,21;UBERON:0001869,1.48e-07,21;UBERON:0000203,1.48e-07,21;UBERON:0000073,1.49e-07,54;UBERON:0001049,1.90e-07,52;UBERON:0005068,1.90e-07,52;UBERON:0006241,1.90e-07,52;UBERON:0007135,1.90e-07,52;UBERON:0004121,2.12e-07,95;UBERON:0000924,2.12e-07,95;UBERON:0006601,2.12e-07,95;UBERON:0003102,8.68e-07,22 | |||
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| ||
|short_description=p1@Cdh13 | |short_description=p1@Cdh13 | ||
}} | }} |
Latest revision as of 14:34, 1 October 2015
Short description: | p1@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3659 |
Association with transcript: | 0bp_to_ENSMUST00000129548, ENSMUST00000148836_5end |
EntrezGene: | Cdh13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.48e-10 | 92 |
gray matter | 1.57e-09 | 34 |
ecto-epithelium | 1.34e-08 | 73 |
primary circulatory organ | 3.96e-08 | 18 |
heart | 3.96e-08 | 18 |
primitive heart tube | 3.96e-08 | 18 |
primary heart field | 3.96e-08 | 18 |
anterior lateral plate mesoderm | 3.96e-08 | 18 |
heart tube | 3.96e-08 | 18 |
heart primordium | 3.96e-08 | 18 |
cardiac mesoderm | 3.96e-08 | 18 |
cardiogenic plate | 3.96e-08 | 18 |
heart rudiment | 3.96e-08 | 18 |
brain grey matter | 5.61e-08 | 29 |
regional part of telencephalon | 5.61e-08 | 29 |
telencephalon | 5.61e-08 | 29 |
cerebral cortex | 1.48e-07 | 21 |
cerebral hemisphere | 1.48e-07 | 21 |
pallium | 1.48e-07 | 21 |
regional part of nervous system | 1.49e-07 | 54 |
neural tube | 1.90e-07 | 52 |
neural rod | 1.90e-07 | 52 |
future spinal cord | 1.90e-07 | 52 |
neural keel | 1.90e-07 | 52 |
ectoderm-derived structure | 2.12e-07 | 95 |
ectoderm | 2.12e-07 | 95 |
presumptive ectoderm | 2.12e-07 | 95 |
surface structure | 8.68e-07 | 22 |