FFCP PHASE1:Mm9::chr1:74438053..74438069,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227292 | |EntrezGene=227292 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3281 | |MCL_coexpression_id=3281 | ||
|TSSclassifier=NA | |||
|UniProt=P58466 | |UniProt=P58466 | ||
|association_with_transcript=-13bp_to_ENSMUST00000027367_5end | |association_with_transcript=-13bp_to_ENSMUST00000027367_5end | ||
|cluster_id=chr1:74438053..74438069,+ | |||
|description=CAGE_peak_6_at_Ctdsp1_5end | |description=CAGE_peak_6_at_Ctdsp1_5end | ||
|id=chr1:74438053..74438069,+ | |id=chr1:74438053..74438069,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.38e-12!59;UBERON:0009854!6.35e-11!23;UBERON:0009856!6.35e-11!23;UBERON:0000160!2.18e-10!43;UBERON:0002107!2.44e-10!22;UBERON:0007499!2.44e-10!22;UBERON:0006925!2.44e-10!22;UBERON:0009497!2.44e-10!22;UBERON:0000015!2.44e-10!22;UBERON:0002423!2.44e-10!22;UBERON:0006235!2.44e-10!22;UBERON:0008835!2.44e-10!22;UBERON:0003894!2.44e-10!22;UBERON:0004161!2.44e-10!22;UBERON:0008836!2.44e-10!22;UBERON:0005172!3.52e-10!49;UBERON:0005173!3.52e-10!49;UBERON:0002417!3.52e-10!49;UBERON:0000916!3.52e-10!49;UBERON:0004119!8.56e-09!130;UBERON:0000925!8.56e-09!130;UBERON:0006595!8.56e-09!130;UBERON:0002365!9.03e-09!25;UBERON:0002330!9.03e-09!25;UBERON:0001007!3.30e-08!128;UBERON:0001555!3.30e-08!128;UBERON:0007026!3.30e-08!128;UBERON:0004921!1.43e-07!126;UBERON:0004185!1.43e-07!126;UBERON:0009569!2.44e-07!66;UBERON:0005177!3.31e-07!85;UBERON:0000466!3.90e-07!79 | |ontology_enrichment_uberon=UBERON:0005409!2.38e-12!59;UBERON:0009854!6.35e-11!23;UBERON:0009856!6.35e-11!23;UBERON:0000160!2.18e-10!43;UBERON:0002107!2.44e-10!22;UBERON:0007499!2.44e-10!22;UBERON:0006925!2.44e-10!22;UBERON:0009497!2.44e-10!22;UBERON:0000015!2.44e-10!22;UBERON:0002423!2.44e-10!22;UBERON:0006235!2.44e-10!22;UBERON:0008835!2.44e-10!22;UBERON:0003894!2.44e-10!22;UBERON:0004161!2.44e-10!22;UBERON:0008836!2.44e-10!22;UBERON:0005172!3.52e-10!49;UBERON:0005173!3.52e-10!49;UBERON:0002417!3.52e-10!49;UBERON:0000916!3.52e-10!49;UBERON:0004119!8.56e-09!130;UBERON:0000925!8.56e-09!130;UBERON:0006595!8.56e-09!130;UBERON:0002365!9.03e-09!25;UBERON:0002330!9.03e-09!25;UBERON:0001007!3.30e-08!128;UBERON:0001555!3.30e-08!128;UBERON:0007026!3.30e-08!128;UBERON:0004921!1.43e-07!126;UBERON:0004185!1.43e-07!126;UBERON:0009569!2.44e-07!66;UBERON:0005177!3.31e-07!85;UBERON:0000466!3.90e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.66e-11,47;UBERON:0009854,5.42e-11,23;UBERON:0009856,5.42e-11,23;UBERON:0002107,2.11e-10,22;UBERON:0007499,2.11e-10,22;UBERON:0006925,2.11e-10,22;UBERON:0009497,2.11e-10,22;UBERON:0000015,2.11e-10,22;UBERON:0002423,2.11e-10,22;UBERON:0006235,2.11e-10,22;UBERON:0008835,2.11e-10,22;UBERON:0003894,2.11e-10,22;UBERON:0004161,2.11e-10,22;UBERON:0008836,2.11e-10,22;UBERON:0005172,3.54e-10,49;UBERON:0005173,3.54e-10,49;UBERON:0002417,3.54e-10,49;UBERON:0000916,3.54e-10,49;UBERON:0000160,1.79e-09,31;UBERON:0005177,1.02e-08,79;UBERON:0002365,1.03e-08,25;UBERON:0002330,1.03e-08,25;UBERON:0009569,1.99e-07,66;UBERON:0004119,2.80e-07,118;UBERON:0000925,2.80e-07,118;UBERON:0006595,2.80e-07,118;UBERON:0001007,9.61e-07,116;UBERON:0001555,9.61e-07,116;UBERON:0007026,9.61e-07,116 | |||
|phase1_expression=0.80074423552397,26.5221309805914,28.6649520815408,27.8267074402284,24.543890767371,4.36486106970913,3.97141489012394,1.29123323441576,0.422366166455,0,0.34243593645101,0.478632953972018,1.19840510951844,0.961624426608971,2.33176833270964,4.04950534779652,2.79824751251259,3.3123527362615,2.4680598049033,2.97072756258621,2.72138528483423,0.794327609607082,0.522399578277871,9.27956052201759,8.02932483735095,16.0784949952206,9.47676391549965,10.5580904016086,22.9928337542212,21.1705308998342,4.21287970245079,4.44521471421742,1.23012957516914,15.8481681015439,1.1554064790051,1.66234645358492,1.02084678131185,2.51118978442145,0,1.0470474879476,1.76469446409304,1.36609096991689,1.45653105909346,2.64383317748712,1.92616169317078,1.65192076945513,15.6478268869608,5.66865406589161,9.66619204031676,5.24960727500565,4.89952475688769,11.5002051491977,3.18786951509699,0,0.672187598284928,2.05807548828758,3.15186783932632,1.54701627683233,0.404632921719196,1.05798195854407,0.633831403506179,5.76035704517525,14.2287167377782,13.498495759221,17.7995945262055,17.0515227587064,5.39280198933128,4.2264013585371,1.45165457231869,1.75507719831198,2.10324961351382,1.42825492201902,1.32521124570968,0.979926393719632,0.670918297127655,0.919218786610021,3.30347642998166,1.91531007127782,0.614426133024974,0.395658863190582,0.548925861614458,0,0.558365998002762,1.12552522006336,1.06958773443767,3.24091444021034,0.711858403995515,1.3047961207771,4.84647637332378,5.36558076758177,2.31891590961342,11.185510400758,4.75979933595425,12.4131734076698,18.1937396885347,8.96053774194671,6.31999890592883,2.21559419351475,2.85764605063156,3.88673531961374,2.53518155598025,1.28326477414318,2.54805239706646,7.11066703153331,3.46385665617943,0.506719730950197,0,8.10705546005326,2.58937883647172,2.07818994690755,2.77576522825817,5.78484408793068,4.84292544237723,4.37095657602605,2.58695155698551,5.15233024451669,11.1237735480468,3.90418263683761,3.5384422077995,2.75003644910596,1.98757366614354,1.45462575940567,13.0474232852686,1.46390398505774,1.8850203613211,17.3710797541842,0.239630249011841,0,0.381210681219194,0.599162557619291,1.37250180845588,0.125654352112864,0.347648640384553,0.767146371990992,0.83115217823824,0.973447578406546,2.64782346010822,2.48813941220186,0.758168275301024,3.78795340595653,2.73252930221678,2.29902104433473,3.96136685571768,2.26057226753573,1.15662048557257,2.0498195245576,1.40552586839593,2.58703370739016,5.17363183038821,3.21480336285293,2.46331573829528,1.31517439456545,2.50242524303038,1.39300866608867,2.05782136407943,3.78165106955137,0,0.51469581422943,0.284163499395593,1.86413195281952,2.11073453982987,2.16074473753218,1.65721314909647,1.57411385397923,1.3884040159864,1.39520366850245,1.87791380979733,0.583826711835847,0.987359099480883,0.820837320395476,0.56748166682099,0.584799949701329,1.53685080703735,0.939444931322602,0.210289948564127,0.617427674275707,20.4859645449955,11.9002754998595,3.83918850963421,3.94802342162745,3.73715637834071,4.84040459096022,5.11469500843202,7.03834816616469,12.3377556001573,4.11747386810027,5.02670417600539,3.38226002469956,3.50935356814416,14.3811105384675,10.8069024937347,9.95706366271836,6.63837653335786,5.36968009265725,3.38123207019241,3.86937522906097,3.10323979468201,2.24434623649019,1.89709611372772,2.80459281161244,3.92496819603437,5.42947521255922,12.4510103376603,8.17541018008861,7.07612382407531,7.42044970870017,8.11440485554012,11.0941493486112,9.67578236769395,9.78166867332756,3.40483976227574,7.96228098245436,43.1304619582064,7.81495990103857,10.9213185590096,11.1134706296729,9.68746033018326,8.68398338454061,1.47802552133284,1.89491411770485,3.7481944581666,3.22515662972857,4.45911471748154,3.85264392116176,2.14239276797412,2.73187107000918,2.20689201748667,1.99318220683897,2.71073106717728,3.11340297959902,2.07221978239075,2.16973587872267,0,4.35124547054968,2.45882136509518,0.827810238914197,1.44495530989013,0.468846746368813,1.96721934452011,3.28212205365685,4.41711507182759,1.56175497718655,2.15423397732799,4.30143836314594,3.11918143715352,2.26461224631066,4.45291771842384,3.79932615284705,3.16230222357219,0.321321316421807,3.40656204499845,3.5613120733451,2.60619134965722,4.61916344323099,6.63725691699814,4.12727081463468,8.16273603804828,4.71512699389745,9.7449624650655,4.91896236710284,2.58428293168221,2.90826983582004,2.49548164869305,2.84433082142234,4.21674434299995,2.06271086496374,1.36175842301515,2.88097750450096,2.71653235943784,1.71469628025274,1.06404140185364,2.14042581122485,0.987294123612726,0.913394847343798,4.92810586933792,9.10877904714427,0.661585194164886,1.97863503529776,1.93757312035087,1.86970067277283,1.3130957840345,0.984845398470368,6.70405924248657,2.41052892613663,3.93003025835061,4.12773735926445,2.77791791054568,3.57900068308913,4.23752105935178,5.0331198105435,0.169978429993855,0.419854356970974,0.967399816630967,7.63736494412091,4.27053591334533,4.67634774391752,2.91614420218863,2.71814784818809,4.36725127492355,3.37160865962052,3.63675205191478,3.40282724579238,4.40690909192096,3.10669656543463,2.25477175473676,4.48549638131936,3.80554528051325,3.69457257853691,4.52059382172059,3.21016638432478,3.63807439801837,2.47388331203505,1.36317147753424,0.724752362478018,1.15212002503146,0.316011120628178,1.01362607645082,1.43795340030758,1.42912905275575,0.895133478337407,0.596044064343795,1.20195449519969,0.295379054349154,0.807731599585181,0.533447646584999,1.20991422164209,0.877120926657772,0.577271049841977,0.701261413089414,0.453460767230423,10.8773117153292,7.71539166841491,7.38692312001945,2.31827512838629,3.94133198447482,3.84618410961257,3.21552568618599,5.01572104035363,0,0.920650473014354,0,0,1.37016503954128,0,0,0,0.453142408984205,0,1.97195960409936,5.1873233542134,2.39027048055788,2.91728060481953,6.70762120409543,3.67687016900028,2.889207461421,3.91466608753899,4.1719497246936,5.81203587056734,4.05566879824384,3.58390048633545,2.99652823903624,3.26528277264833,3.50356360629241,3.33405583898152,3.01299247456624,2.31491064556446,1.64834360321323,2.35518272215036,3.08582327146874,2.12970967391205,1.66905332963125,3.48831399917588,2.25862512996793,2.62305284464197,2.0122077016005,1.31534855718921,3.12349461845482,2.24456908663095,2.49133538060766,2.56111654176465,2.86461730218783,2.78886314134739,2.3148793317737,3.49734809113124,3.27504251823572,2.36358159453128,2.48674831689496,4.63241980150983,2.78241402744506 | |phase1_expression=0.80074423552397,26.5221309805914,28.6649520815408,27.8267074402284,24.543890767371,4.36486106970913,3.97141489012394,1.29123323441576,0.422366166455,0,0.34243593645101,0.478632953972018,1.19840510951844,0.961624426608971,2.33176833270964,4.04950534779652,2.79824751251259,3.3123527362615,2.4680598049033,2.97072756258621,2.72138528483423,0.794327609607082,0.522399578277871,9.27956052201759,8.02932483735095,16.0784949952206,9.47676391549965,10.5580904016086,22.9928337542212,21.1705308998342,4.21287970245079,4.44521471421742,1.23012957516914,15.8481681015439,1.1554064790051,1.66234645358492,1.02084678131185,2.51118978442145,0,1.0470474879476,1.76469446409304,1.36609096991689,1.45653105909346,2.64383317748712,1.92616169317078,1.65192076945513,15.6478268869608,5.66865406589161,9.66619204031676,5.24960727500565,4.89952475688769,11.5002051491977,3.18786951509699,0,0.672187598284928,2.05807548828758,3.15186783932632,1.54701627683233,0.404632921719196,1.05798195854407,0.633831403506179,5.76035704517525,14.2287167377782,13.498495759221,17.7995945262055,17.0515227587064,5.39280198933128,4.2264013585371,1.45165457231869,1.75507719831198,2.10324961351382,1.42825492201902,1.32521124570968,0.979926393719632,0.670918297127655,0.919218786610021,3.30347642998166,1.91531007127782,0.614426133024974,0.395658863190582,0.548925861614458,0,0.558365998002762,1.12552522006336,1.06958773443767,3.24091444021034,0.711858403995515,1.3047961207771,4.84647637332378,5.36558076758177,2.31891590961342,11.185510400758,4.75979933595425,12.4131734076698,18.1937396885347,8.96053774194671,6.31999890592883,2.21559419351475,2.85764605063156,3.88673531961374,2.53518155598025,1.28326477414318,2.54805239706646,7.11066703153331,3.46385665617943,0.506719730950197,0,8.10705546005326,2.58937883647172,2.07818994690755,2.77576522825817,5.78484408793068,4.84292544237723,4.37095657602605,2.58695155698551,5.15233024451669,11.1237735480468,3.90418263683761,3.5384422077995,2.75003644910596,1.98757366614354,1.45462575940567,13.0474232852686,1.46390398505774,1.8850203613211,17.3710797541842,0.239630249011841,0,0.381210681219194,0.599162557619291,1.37250180845588,0.125654352112864,0.347648640384553,0.767146371990992,0.83115217823824,0.973447578406546,2.64782346010822,2.48813941220186,0.758168275301024,3.78795340595653,2.73252930221678,2.29902104433473,3.96136685571768,2.26057226753573,1.15662048557257,2.0498195245576,1.40552586839593,2.58703370739016,5.17363183038821,3.21480336285293,2.46331573829528,1.31517439456545,2.50242524303038,1.39300866608867,2.05782136407943,3.78165106955137,0,0.51469581422943,0.284163499395593,1.86413195281952,2.11073453982987,2.16074473753218,1.65721314909647,1.57411385397923,1.3884040159864,1.39520366850245,1.87791380979733,0.583826711835847,0.987359099480883,0.820837320395476,0.56748166682099,0.584799949701329,1.53685080703735,0.939444931322602,0.210289948564127,0.617427674275707,20.4859645449955,11.9002754998595,3.83918850963421,3.94802342162745,3.73715637834071,4.84040459096022,5.11469500843202,7.03834816616469,12.3377556001573,4.11747386810027,5.02670417600539,3.38226002469956,3.50935356814416,14.3811105384675,10.8069024937347,9.95706366271836,6.63837653335786,5.36968009265725,3.38123207019241,3.86937522906097,3.10323979468201,2.24434623649019,1.89709611372772,2.80459281161244,3.92496819603437,5.42947521255922,12.4510103376603,8.17541018008861,7.07612382407531,7.42044970870017,8.11440485554012,11.0941493486112,9.67578236769395,9.78166867332756,3.40483976227574,7.96228098245436,43.1304619582064,7.81495990103857,10.9213185590096,11.1134706296729,9.68746033018326,8.68398338454061,1.47802552133284,1.89491411770485,3.7481944581666,3.22515662972857,4.45911471748154,3.85264392116176,2.14239276797412,2.73187107000918,2.20689201748667,1.99318220683897,2.71073106717728,3.11340297959902,2.07221978239075,2.16973587872267,0,4.35124547054968,2.45882136509518,0.827810238914197,1.44495530989013,0.468846746368813,1.96721934452011,3.28212205365685,4.41711507182759,1.56175497718655,2.15423397732799,4.30143836314594,3.11918143715352,2.26461224631066,4.45291771842384,3.79932615284705,3.16230222357219,0.321321316421807,3.40656204499845,3.5613120733451,2.60619134965722,4.61916344323099,6.63725691699814,4.12727081463468,8.16273603804828,4.71512699389745,9.7449624650655,4.91896236710284,2.58428293168221,2.90826983582004,2.49548164869305,2.84433082142234,4.21674434299995,2.06271086496374,1.36175842301515,2.88097750450096,2.71653235943784,1.71469628025274,1.06404140185364,2.14042581122485,0.987294123612726,0.913394847343798,4.92810586933792,9.10877904714427,0.661585194164886,1.97863503529776,1.93757312035087,1.86970067277283,1.3130957840345,0.984845398470368,6.70405924248657,2.41052892613663,3.93003025835061,4.12773735926445,2.77791791054568,3.57900068308913,4.23752105935178,5.0331198105435,0.169978429993855,0.419854356970974,0.967399816630967,7.63736494412091,4.27053591334533,4.67634774391752,2.91614420218863,2.71814784818809,4.36725127492355,3.37160865962052,3.63675205191478,3.40282724579238,4.40690909192096,3.10669656543463,2.25477175473676,4.48549638131936,3.80554528051325,3.69457257853691,4.52059382172059,3.21016638432478,3.63807439801837,2.47388331203505,1.36317147753424,0.724752362478018,1.15212002503146,0.316011120628178,1.01362607645082,1.43795340030758,1.42912905275575,0.895133478337407,0.596044064343795,1.20195449519969,0.295379054349154,0.807731599585181,0.533447646584999,1.20991422164209,0.877120926657772,0.577271049841977,0.701261413089414,0.453460767230423,10.8773117153292,7.71539166841491,7.38692312001945,2.31827512838629,3.94133198447482,3.84618410961257,3.21552568618599,5.01572104035363,0,0.920650473014354,0,0,1.37016503954128,0,0,0,0.453142408984205,0,1.97195960409936,5.1873233542134,2.39027048055788,2.91728060481953,6.70762120409543,3.67687016900028,2.889207461421,3.91466608753899,4.1719497246936,5.81203587056734,4.05566879824384,3.58390048633545,2.99652823903624,3.26528277264833,3.50356360629241,3.33405583898152,3.01299247456624,2.31491064556446,1.64834360321323,2.35518272215036,3.08582327146874,2.12970967391205,1.66905332963125,3.48831399917588,2.25862512996793,2.62305284464197,2.0122077016005,1.31534855718921,3.12349461845482,2.24456908663095,2.49133538060766,2.56111654176465,2.86461730218783,2.78886314134739,2.3148793317737,3.49734809113124,3.27504251823572,2.36358159453128,2.48674831689496,4.63241980150983,2.78241402744506 | ||
|short_description=p6@Ctdsp1 | |short_description=p6@Ctdsp1 | ||
}} | }} |
Latest revision as of 14:36, 1 October 2015
Short description: | p6@Ctdsp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ctdsp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3281 |
Association with transcript: | -13bp_to_ENSMUST00000027367_5end |
EntrezGene: | Ctdsp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.66e-11 | 47 |
digestive tract diverticulum | 5.42e-11 | 23 |
sac | 5.42e-11 | 23 |
liver | 2.11e-10 | 22 |
epithelial sac | 2.11e-10 | 22 |
digestive gland | 2.11e-10 | 22 |
epithelium of foregut-midgut junction | 2.11e-10 | 22 |
anatomical boundary | 2.11e-10 | 22 |
hepatobiliary system | 2.11e-10 | 22 |
foregut-midgut junction | 2.11e-10 | 22 |
hepatic diverticulum | 2.11e-10 | 22 |
liver primordium | 2.11e-10 | 22 |
septum transversum | 2.11e-10 | 22 |
liver bud | 2.11e-10 | 22 |
abdomen element | 3.54e-10 | 49 |
abdominal segment element | 3.54e-10 | 49 |
abdominal segment of trunk | 3.54e-10 | 49 |
abdomen | 3.54e-10 | 49 |
intestine | 1.79e-09 | 31 |
trunk region element | 1.02e-08 | 79 |
exocrine gland | 1.03e-08 | 25 |
exocrine system | 1.03e-08 | 25 |
subdivision of trunk | 1.99e-07 | 66 |
endoderm-derived structure | 2.80e-07 | 118 |
endoderm | 2.80e-07 | 118 |
presumptive endoderm | 2.80e-07 | 118 |
digestive system | 9.61e-07 | 116 |
digestive tract | 9.61e-07 | 116 |
primitive gut | 9.61e-07 | 116 |