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FFCP PHASE1:Mm9::chr11:4999409..4999521,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=279766
|EntrezGene=279766
|HGNC=
|HGNC=
|MCL_coexpression_id=2633
|TSSclassifier=NA
|UniProt=Q8BP97,Q5SUT8,Q5SUU0,B7ZNJ8
|UniProt=Q8BP97,Q5SUT8,Q5SUU0,B7ZNJ8
|association_with_transcript=0bp_to_ENSMUST00000036320,ENSMUST00000134267,ENSMUST00000150632,NM_177370,uc007hwb.1,uc007hwc.1,uc007hwd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000036320,ENSMUST00000134267,ENSMUST00000150632,NM_177370,uc007hwb.1,uc007hwc.1,uc007hwd.1_5end
|cluster_id=chr11:4999409..4999521,+
|description=CAGE_peak_1_at_Rhbdd3_5end
|description=CAGE_peak_1_at_Rhbdd3_5end
|id=chr11:4999409..4999521,+
|id=chr11:4999409..4999521,+
|ontology_enrichment_celltype=CL:0002321!2.39e-12!70;CL:0000220!2.39e-12!70;CL:0000055!2.13e-11!50;CL:0002319!1.24e-09!43;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0000393!7.68e-08!39;CL:0000211!7.68e-08!39;CL:0000548!8.71e-07!115;CL:0000004!8.71e-07!115;CL:0000255!8.71e-07!115
|ontology_enrichment_celltype_v019_2=CL:0002321,2.39e-12,70;CL:0002319,1.24e-09,43;CL:0000221,1.28e-09,44;CL:0000133,1.28e-09,44;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.00e-17!73;UBERON:0005743!2.00e-17!73;UBERON:0000073!1.94e-16!75;UBERON:0001016!1.94e-16!75;UBERON:0000025!3.59e-12!114;UBERON:0004111!6.49e-12!122;UBERON:0004121!7.01e-12!102;UBERON:0000924!7.01e-12!102;UBERON:0006601!7.01e-12!102;UBERON:0001049!5.27e-11!52;UBERON:0005068!5.27e-11!52;UBERON:0006241!5.27e-11!52;UBERON:0007135!5.27e-11!52;UBERON:0000955!6.15e-11!50;UBERON:0006238!6.15e-11!50;UBERON:0002616!1.15e-10!49;UBERON:0002346!2.78e-09!71;UBERON:0003075!2.78e-09!71;UBERON:0007284!2.78e-09!71;UBERON:0000033!1.80e-08!63;UBERON:0003080!1.93e-08!40;UBERON:0002780!3.98e-08!39;UBERON:0001890!3.98e-08!39;UBERON:0006240!3.98e-08!39;UBERON:0002020!4.53e-08!34;UBERON:0003914!6.76e-07!47;UBERON:0002791!8.03e-07!29;UBERON:0003528!8.03e-07!29;UBERON:0001893!8.03e-07!29;UBERON:0003056!8.58e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.00e-17,73;UBERON:0001016,1.94e-16,75;UBERON:0000025,3.59e-12,114;UBERON:0004121,4.36e-12,95;UBERON:0000924,4.36e-12,95;UBERON:0006601,4.36e-12,95;UBERON:0000073,5.02e-12,54;UBERON:0004111,6.49e-12,122;UBERON:0010314,1.09e-11,92;UBERON:0001049,5.27e-11,52;UBERON:0005068,5.27e-11,52;UBERON:0006241,5.27e-11,52;UBERON:0007135,5.27e-11,52;UBERON:0000955,9.23e-10,47;UBERON:0006238,9.23e-10,47;UBERON:0002346,1.21e-09,64;UBERON:0003075,1.21e-09,64;UBERON:0007284,1.21e-09,64;UBERON:0002616,1.69e-09,46;UBERON:0003080,1.93e-08,40;UBERON:0002780,3.98e-08,39;UBERON:0001890,3.98e-08,39;UBERON:0006240,3.98e-08,39;UBERON:0002020,4.53e-08,34;UBERON:0010371,2.25e-07,73;UBERON:0003914,6.76e-07,47;UBERON:0003528,8.03e-07,29;UBERON:0002791,8.03e-07,29;UBERON:0001893,8.03e-07,29;UBERON:0003056,8.58e-07,49
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4389408873,6.30290348093231,6.80433647177348,6.690825472463,6.33251434863915,7.28267470478032,6.28166263512553,4.4498510137285,7.38805347763219,4.34937519160848,96.9551854536807,6.57872802593507,5.95650565645551,6.41688921535357,6.97463046779748,6.9272011451219,5.04636126176742,7.81226309063701,8.17902886520545,36.9623704863789,50.4052510951265,1.89606672376907,7.29810775044591,6.47079030138412,6.62596197186755,4.11761400035207,3.57626438606277,4.68762253127878,4.57837534241189,2.72609414859999,2.97206545954499,2.31900225814733,2.14407337627455,2.5977197242889,3.62318396762864,11.789979947991,7.5475224147182,6.54911153249173,6.37961542183498,8.69353173144857,8.07034644440082,6.04400360081975,4.93047271881851,13.0408747049194,12.9892923801925,15.651058041244,14.3223878359849,22.6846200693668,15.0718154349541,18.8848474347425,16.8755625057951,18.463169332193,16.3131267234314,17.0860902878101,2.80225838477277,6.3843979744165,7.5122786531819,7.77941494618541,3.35381060204772,4.41224420280034,6.44515510624684,7.2112270033613,4.49286893428541,8.08631077644152,8.36481689637791,6.22466926574051,7.58496210506047,6.40251524048693,4.36509564062661,10.9547548995107,7.41659686047075,6.36600427530227,9.06588981767275,7.65434384698866,6.85738504770831,6.56660482789549,6.91464950847231,6.97662799835177,6.49354724865781,6.00763716030903,6.40247905054704,6.57674278594607,7.4692262615224,6.17256498823512,4.98267076121531,6.89531376628944,7.7753898202241,6.50734732981057,7.13754460630223,9.49280196164194,6.31615342802603,8.80971321598023,12.4337415844748,10.5883881177367,10.8977882741598
|phase1_expression=5.60520964866779,1.39590163055744,3.63999391511629,6.35174843744343,4.50806156951712,5.70789524500425,6.77476657727024,1.67860320474049,2.39340827657833,2.57470978954193,6.67750076079469,5.10541817570153,1.71200729931206,1.04904482902797,8.32774404539157,7.28910962603373,16.0899231969474,3.78554598429885,3.29074640653773,1.27316895539409,18.1142208021779,6.55320277925843,7.05239430675126,7.67963629408352,6.8822784320151,2.8711598205751,3.4460959692726,4.95583835177545,8.55105387553682,7.05684363327806,7.76056787293567,22.2260735710871,22.1423323530445,15.8481681015439,13.5760261283099,12.1351291111699,9.18762103180661,0.418531630736908,1.5626706890476,1.0470474879476,2.35292595212406,0.683045484958446,0.971020706062307,15.2335149750449,12.8748702648783,12.8482726513177,38.3371758730539,19.1862137614793,19.7717564461025,19.2485600083541,16.6583841734181,20.125359011096,1.34226084846189,0.725362142011344,2.35265659399725,6.68874533693462,17.7650732762029,9.28209766099396,11.5320382689971,12.1667925232568,22.8179305262225,14.5703148789727,14.2287167377782,27.4469413770827,43.5101199529469,43.3392870117121,26.9640099466564,38.0376122268339,5.91030790158323,8.77538599155989,7.15104868594699,12.5686433137674,13.4729809980484,7.34944795289724,5.84657373211242,14.7075005857603,12.1127469099328,15.7055425844781,17.2039317246993,12.924856197559,11.5274430939036,7.29278718779464,22.0554569211091,17.4456409109821,15.279824777681,14.142172102736,10.6778760599327,9.13357284543973,5.2251073399897,6.57472572929034,10.7249860819621,14.6272059086836,23.7989966797713,33.4615978815447,39.6363614643078,36.7382047419815,13.7635531729117,5.28333999991979,6.75443611967459,7.0667914902068,8.16891834704747,7.69958864485907,12.7402619853323,7.11066703153331,16.4533191168523,18.7486300451573,16.6823066854878,11.6467557313441,2.33044095282455,10.5393918736026,6.7659277438793,7.91610243611567,6.45723392316964,7.53613202763113,6.58496759959947,10.3046604890334,8.15743393523434,10.1219549843938,6.19227386364912,8.41187619726528,8.61281921995535,2.42437626567611,9.31958806090611,7.90508151931177,7.95897485891129,4.59822699375465,4.55297473122497,11.9980546198682,4.70159840170339,12.8819949888148,7.77751024791665,6.15706325353036,12.1677024134594,8.95004100656157,12.6750707181332,9.5722345209977,7.12875546952214,8.08645308965605,10.867078612648,7.78634866779954,9.49879233627737,6.66716102857071,5.58192602396583,6.0281927134286,5.03470093719826,8.32739181851524,6.65282244374075,9.05461797586555,3.66465587985832,4.72765200419548,4.57472922826267,7.45265490253754,5.83899223373756,3.83077383174383,4.7329891373827,6.96619933864726,6.31991868581911,9.52187256324446,9.09323198065896,6.83515049367156,9.61556845922494,5.40186184383045,9.94327889457883,8.65762619688577,9.41029388613007,9.06882384526591,10.7309360559848,8.52386999280337,9.54447129498187,13.4617320544858,10.5389452409612,12.7193989060039,13.8316572633362,13.9574675510787,12.1968170167194,6.48299057989492,5.94753809370836,5.55346189993443,5.33220626338085,5.57368012465052,4.12375876230699,6.6555563125703,6.89371935919098,7.03834816616469,5.69434873853414,7.5761519173045,6.53471542880701,9.35095418593409,7.79856348476481,5.39291645192533,7.3486936957396,7.36822711041159,3.41402221715547,6.28366819353509,6.76246414038483,6.31319116320474,7.75809948670503,5.26018649177389,6.63983639804701,6.05201606716369,11.6179058602617,12.3397163921801,14.5261787272703,7.84171996865642,5.11053387294328,6.07127703439105,6.6943840058206,7.23531479257251,6.87489799809833,8.34318798607351,11.8358715545776,9.60964946158285,2.87536413054709,10.7920874823866,14.0416952901552,14.9021537988796,13.6342034276653,13.5084185981743,4.0645701836653,5.11626811780309,3.25929952884052,5.43184274480602,5.63256595892405,5.3602002381381,6.42717830392237,8.39074685788535,4.25614889086716,7.30833475840957,4.9430978283821,3.76885623846197,5.18054945597687,4.48412081602686,33.1740824666399,15.2293591469239,7.86822836830458,6.89841865761831,9.47248480927973,8.08760637486202,3.11476396215683,18.1779067587149,10.7272794601527,8.98009111882268,8.83235930704476,13.6212214832955,9.35754431146055,11.0399847007645,14.1683745586213,10.5212108848072,11.4633455604492,11.8888887076069,9.08416545332919,8.72521457969551,5.53815661802159,7.09371528781903,3.98235415019888,5.34117399540959,6.95344181018927,6.60117779145643,6.20133975049623,7.99331384654211,6.46070732920553,9.45187696641514,6.06045543254026,5.37262488490887,4.21674434299995,7.21948802737308,8.85142974959849,8.8229936075342,12.6771510107099,10.502514716548,7.80297028026004,8.56170324489939,9.54384319492302,11.2652031172402,4.4587624532105,9.74427525973573,9.92377791247329,8.40919890001548,5.9741837877485,3.67908842061751,4.41677672811605,4.26766339337159,5.24665505933731,10.3838169125885,5.12612642393558,5.57244543500701,6.85219751267933,5.08594833912666,5.46776910884101,6.40578884978263,4.24946074984638,5.45810664062266,4.28419918793714,5.72802370809068,5.21954389408873,6.30290348093231,6.80433647177348,6.690825472463,6.33251434863915,7.28267470478032,6.28166263512553,4.4498510137285,7.38805347763219,4.34937519160848,96.9551854536807,6.57872802593507,5.95650565645551,6.41688921535357,6.97463046779748,6.9272011451219,5.04636126176742,7.81226309063701,8.17902886520545,36.9623704863789,50.4052510951265,1.89606672376907,7.29810775044591,6.47079030138412,6.62596197186755,4.11761400035207,3.57626438606277,4.68762253127878,4.57837534241189,2.72609414859999,2.97206545954499,2.31900225814733,2.14407337627455,2.5977197242889,3.62318396762864,11.789979947991,7.5475224147182,6.54911153249173,6.37961542183498,8.69353173144857,8.07034644440082,6.04400360081975,4.93047271881851,13.0408747049194,12.9892923801925,15.651058041244,14.3223878359849,22.6846200693668,15.0718154349541,18.8848474347425,16.8755625057951,18.463169332193,16.3131267234314,17.0860902878101,2.80225838477277,6.3843979744165,7.5122786531819,7.77941494618541,3.35381060204772,4.41224420280034,6.44515510624684,7.2112270033613,4.49286893428541,8.08631077644152,8.36481689637791,6.22466926574051,7.58496210506047,6.40251524048693,4.36509564062661,10.9547548995107,7.41659686047075,6.36600427530227,9.06588981767275,7.65434384698866,6.85738504770831,6.56660482789549,6.91464950847231,6.97662799835177,6.49354724865781,6.00763716030903,6.40247905054704,6.57674278594607,7.4692262615224,6.17256498823512,4.98267076121531,6.89531376628944,7.7753898202241,6.50734732981057,7.13754460630223,9.49280196164194,6.31615342802603,8.80971321598023,12.4337415844748,10.5883881177367,10.8977882741598
|short_description=p1@Rhbdd3
|short_description=p1@Rhbdd3
}}
}}

Latest revision as of 14:46, 1 October 2015

Short description:p1@Rhbdd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rhbdd3_5end
Coexpression cluster:MCL_coexpression_mm9:2633
Association with transcript: 0bp_to_ENSMUST00000036320, ENSMUST00000134267, ENSMUST00000150632, NM_177370, uc007hwb.1, uc007hwc.1, uc007hwd.1_5end
EntrezGene:Rhbdd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rhbdd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B98.55
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B738.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.77
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D243.34
Mouse Microglia, donor1.CNhs12629.11718-123C826.96
Mouse Microglia, donor2.CNhs12634.11736-123E838.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F96.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C833.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F636.74
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.65
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I310.30
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F58.41
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.70
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D512.17
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.09
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C69.50
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C65.03
eyeball, neonate N01.CNhs11140.1532-43E78.33
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G113.46
heart, neonate N16.CNhs11209.782-15G110.54
heart, neonate N20.CNhs11127.821-26I612.72
heart, neonate N25.CNhs11196.1351-25D313.83
heart, neonate N30.CNhs11202.1390-42D213.96
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E97.58
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G75.26
kidney, neonate N10.CNhs11206.758-6D56.64
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F311.62
kidney, neonate N30.CNhs11203.1385-42H112.34
liver, adult pregnant day01.CNhs10466.508-5B214.53
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A314.90
liver, neonate N25.CNhs11198.1368-26H113.63
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.62
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C712.68
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F89.92
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H33.68
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A96.28
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G596.96
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C55.96
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D98.18
testis, neonate N20.CNhs11110.839-18H336.96
testis, neonate N30.CNhs11130.1391-42E250.41
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.38
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell2.39e-1270
neural cell1.24e-0943
ectodermal cell1.28e-0944
neurectodermal cell1.28e-0944
electrically responsive cell7.68e-0839
electrically active cell7.68e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.00e-1773
nervous system1.94e-1675
tube3.59e-12114
ectoderm-derived structure4.36e-1295
ectoderm4.36e-1295
presumptive ectoderm4.36e-1295
regional part of nervous system5.02e-1254
anatomical conduit6.49e-12122
structure with developmental contribution from neural crest1.09e-1192
neural tube5.27e-1152
neural rod5.27e-1152
future spinal cord5.27e-1152
neural keel5.27e-1152
brain9.23e-1047
future brain9.23e-1047
neurectoderm1.21e-0964
neural plate1.21e-0964
presumptive neural plate1.21e-0964
regional part of brain1.69e-0946
anterior neural tube1.93e-0840
regional part of forebrain3.98e-0839
forebrain3.98e-0839
future forebrain3.98e-0839
gray matter4.53e-0834
ecto-epithelium2.25e-0773
epithelial tube6.76e-0747
brain grey matter8.03e-0729
regional part of telencephalon8.03e-0729
telencephalon8.03e-0729
pre-chordal neural plate8.58e-0749
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