FFCP PHASE1:Mm9::chr16:10835179..10835186,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=223970|HGNC=|MCL_coexpression_id=4|UniProt=Q3UPE3|association_with_transcript=27bp_to_ENSMUST00000037913,ENSMUST00000100183,NM_001162932,uc007yek.2,uc007yel.2_5end|description=CAGE_peak_2_at_A630055G03Rik_5end|id=chr16:10835179..10835186,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.28e-14!29;UBERON:0002370!5.45e-12!23;UBERON:0000974!5.45e-12!23;UBERON:0004807!5.45e-12!23;UBERON:0005058!5.45e-12!23;UBERON:0003351!5.45e-12!23;UBERON:0009113!5.45e-12!23;UBERON:0003295!5.45e-12!23;UBERON:0009722!5.45e-12!23;UBERON:0005562!5.45e-12!23;UBERON:0007690!5.45e-12!23;UBERON:0006562!2.70e-11!24;UBERON:0003408!2.70e-11!24;UBERON:0001557!2.70e-11!24;UBERON:0001042!2.70e-11!24;UBERON:0008814!2.70e-11!24;UBERON:0009145!2.70e-11!24;UBERON:0000072!1.56e-09!27;UBERON:0000065!1.83e-09!41;UBERON:0001004!4.24e-09!42;UBERON:0005057!2.38e-07!51;UBERON:0002390!5.84e-07!45;UBERON:0003061!5.84e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.46e-17,23;UBERON:0000974,3.46e-17,23;UBERON:0004807,3.46e-17,23;UBERON:0005058,3.46e-17,23;UBERON:0003351,3.46e-17,23;UBERON:0009113,3.46e-17,23;UBERON:0003295,3.46e-17,23;UBERON:0009722,3.46e-17,23;UBERON:0005562,3.46e-17,23;UBERON:0007690,3.46e-17,23;UBERON:0006562,1.77e-16,24;UBERON:0003408,1.77e-16,24;UBERON:0001557,1.77e-16,24;UBERON:0001042,1.77e-16,24;UBERON:0008814,1.77e-16,24;UBERON:0009145,1.77e-16,24;UBERON:0000072,1.15e-14,27;UBERON:0004177,1.16e-13,29;UBERON:0005057,1.16e-13,29;UBERON:0000077,2.45e-11,35;UBERON:0007811,5.05e-11,36;UBERON:0003929,9.31e-10,55;UBERON:0000065,1.10e-09,41;UBERON:0001004,1.87e-09,42;UBERON:0000153,3.09e-09,43;UBERON:0002368,6.15e-09,60;UBERON:0002390,7.94e-09,45;UBERON:0003061,7.94e-09,45;UBERON:0002193,2.83e-08,48;UBERON:0002405,2.83e-08,48;UBERON:0002530,3.05e-08,65;UBERON:0000490,4.08e-08,66;UBERON:0005911,9.32e-08,69;UBERON:0000949,1.99e-07,72|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.422366166455,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0.716106782669926,0.39736270956253,1.20195449519969,1.03382669022204,1.11063094942962,2.28620419965,0.907435666231565,1.07203668813728,0.769694733122636,1.63627663054197,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p2@A630055G03Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=223970 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UPE3 | |||
|association_with_transcript=27bp_to_ENSMUST00000037913,ENSMUST00000100183,NM_001162932,uc007yek.2,uc007yel.2_5end | |||
|cluster_id=chr16:10835179..10835186,+ | |||
|description=CAGE_peak_2_at_A630055G03Rik_5end | |||
|id=chr16:10835179..10835186,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.28e-14!29;UBERON:0002370!5.45e-12!23;UBERON:0000974!5.45e-12!23;UBERON:0004807!5.45e-12!23;UBERON:0005058!5.45e-12!23;UBERON:0003351!5.45e-12!23;UBERON:0009113!5.45e-12!23;UBERON:0003295!5.45e-12!23;UBERON:0009722!5.45e-12!23;UBERON:0005562!5.45e-12!23;UBERON:0007690!5.45e-12!23;UBERON:0006562!2.70e-11!24;UBERON:0003408!2.70e-11!24;UBERON:0001557!2.70e-11!24;UBERON:0001042!2.70e-11!24;UBERON:0008814!2.70e-11!24;UBERON:0009145!2.70e-11!24;UBERON:0000072!1.56e-09!27;UBERON:0000065!1.83e-09!41;UBERON:0001004!4.24e-09!42;UBERON:0005057!2.38e-07!51;UBERON:0002390!5.84e-07!45;UBERON:0003061!5.84e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.46e-17,23;UBERON:0000974,3.46e-17,23;UBERON:0004807,3.46e-17,23;UBERON:0005058,3.46e-17,23;UBERON:0003351,3.46e-17,23;UBERON:0009113,3.46e-17,23;UBERON:0003295,3.46e-17,23;UBERON:0009722,3.46e-17,23;UBERON:0005562,3.46e-17,23;UBERON:0007690,3.46e-17,23;UBERON:0006562,1.77e-16,24;UBERON:0003408,1.77e-16,24;UBERON:0001557,1.77e-16,24;UBERON:0001042,1.77e-16,24;UBERON:0008814,1.77e-16,24;UBERON:0009145,1.77e-16,24;UBERON:0000072,1.15e-14,27;UBERON:0004177,1.16e-13,29;UBERON:0005057,1.16e-13,29;UBERON:0000077,2.45e-11,35;UBERON:0007811,5.05e-11,36;UBERON:0003929,9.31e-10,55;UBERON:0000065,1.10e-09,41;UBERON:0001004,1.87e-09,42;UBERON:0000153,3.09e-09,43;UBERON:0002368,6.15e-09,60;UBERON:0002390,7.94e-09,45;UBERON:0003061,7.94e-09,45;UBERON:0002193,2.83e-08,48;UBERON:0002405,2.83e-08,48;UBERON:0002530,3.05e-08,65;UBERON:0000490,4.08e-08,66;UBERON:0005911,9.32e-08,69;UBERON:0000949,1.99e-07,72 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.422366166455,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0.716106782669926,0.39736270956253,1.20195449519969,1.03382669022204,1.11063094942962,2.28620419965,0.907435666231565,1.07203668813728,0.769694733122636,1.63627663054197,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p2@A630055G03Rik | |||
}} |
Latest revision as of 14:51, 1 October 2015
Short description: | p2@A630055G03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_A630055G03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 27bp_to_ENSMUST00000037913, ENSMUST00000100183, NM_001162932, uc007yek.2, uc007yel.2_5end |
EntrezGene: | A630055G03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.46e-17 | 23 |
neck | 3.46e-17 | 23 |
respiratory system epithelium | 3.46e-17 | 23 |
hemolymphoid system gland | 3.46e-17 | 23 |
pharyngeal epithelium | 3.46e-17 | 23 |
thymic region | 3.46e-17 | 23 |
pharyngeal gland | 3.46e-17 | 23 |
entire pharyngeal arch endoderm | 3.46e-17 | 23 |
thymus primordium | 3.46e-17 | 23 |
early pharyngeal endoderm | 3.46e-17 | 23 |
pharynx | 1.77e-16 | 24 |
gland of gut | 1.77e-16 | 24 |
upper respiratory tract | 1.77e-16 | 24 |
chordate pharynx | 1.77e-16 | 24 |
pharyngeal arch system | 1.77e-16 | 24 |
pharyngeal region of foregut | 1.77e-16 | 24 |
segment of respiratory tract | 1.15e-14 | 27 |
hemopoietic organ | 1.16e-13 | 29 |
immune organ | 1.16e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.45e-11 | 35 |
craniocervical region | 5.05e-11 | 36 |
gut epithelium | 9.31e-10 | 55 |
respiratory tract | 1.10e-09 | 41 |
respiratory system | 1.87e-09 | 42 |
anterior region of body | 3.09e-09 | 43 |
endocrine gland | 6.15e-09 | 60 |
hematopoietic system | 7.94e-09 | 45 |
blood island | 7.94e-09 | 45 |
hemolymphoid system | 2.83e-08 | 48 |
immune system | 2.83e-08 | 48 |
gland | 3.05e-08 | 65 |
unilaminar epithelium | 4.08e-08 | 66 |
endo-epithelium | 9.32e-08 | 69 |
endocrine system | 1.99e-07 | 72 |