FFCP PHASE1:Mm9::chr8:122025598..122025626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234788 | |EntrezGene=234788 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=488 | |||
|TSSclassifier=NA | |||
|UniProt=Q5HZH7 | |UniProt=Q5HZH7 | ||
|association_with_transcript=0bp_to_ENSMUST00000036748,NM_001009950,uc009npr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000036748,NM_001009950,uc009npr.1_5end | ||
|cluster_id=chr8:122025598..122025626,- | |||
|description=CAGE_peak_1_at_Slc38a8_5end | |description=CAGE_peak_1_at_Slc38a8_5end | ||
|id=chr8:122025598..122025626,- | |id=chr8:122025598..122025626,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.87e-43!9;UBERON:0000019!1.87e-43!9;UBERON:0000047!1.87e-43!9;UBERON:0004088!1.87e-43!9;UBERON:0002104!1.87e-43!9;UBERON:0001456!1.87e-43!9;UBERON:0003072!1.87e-43!9;UBERON:0003071!1.87e-43!9;UBERON:0004128!1.87e-43!9;UBERON:0001444!1.55e-35!11;UBERON:0000020!1.45e-32!12;UBERON:0001032!1.45e-32!12;UBERON:0004456!1.45e-32!12;UBERON:0005085!4.77e-30!13;UBERON:0003056!4.30e-10!49;UBERON:0000033!1.02e-07!63;UBERON:0002346!8.90e-07!71;UBERON:0003075!8.90e-07!71;UBERON:0007284!8.90e-07!71 | |ontology_enrichment_uberon=UBERON:0000970!1.87e-43!9;UBERON:0000019!1.87e-43!9;UBERON:0000047!1.87e-43!9;UBERON:0004088!1.87e-43!9;UBERON:0002104!1.87e-43!9;UBERON:0001456!1.87e-43!9;UBERON:0003072!1.87e-43!9;UBERON:0003071!1.87e-43!9;UBERON:0004128!1.87e-43!9;UBERON:0001444!1.55e-35!11;UBERON:0000020!1.45e-32!12;UBERON:0001032!1.45e-32!12;UBERON:0004456!1.45e-32!12;UBERON:0005085!4.77e-30!13;UBERON:0003056!4.30e-10!49;UBERON:0000033!1.02e-07!63;UBERON:0002346!8.90e-07!71;UBERON:0003075!8.90e-07!71;UBERON:0007284!8.90e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.90e-31,9;UBERON:0000019,1.90e-31,9;UBERON:0000047,1.90e-31,9;UBERON:0010312,1.90e-31,9;UBERON:0004088,1.90e-31,9;UBERON:0002104,1.90e-31,9;UBERON:0001456,1.90e-31,9;UBERON:0003072,1.90e-31,9;UBERON:0004128,1.90e-31,9;UBERON:0003071,1.90e-31,9;UBERON:0001444,6.81e-26,11;UBERON:0000020,8.30e-24,12;UBERON:0001032,8.30e-24,12;UBERON:0004456,8.30e-24,12;UBERON:0000033,4.84e-22,13;UBERON:0005085,4.84e-22,13;UBERON:0003056,1.64e-09,49;UBERON:0007811,2.09e-08,36;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0000153,3.94e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4096354370163,4.59804208866946,1.0803727788321,1.80845781402858,0.544291993210623,0.2562274405697,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96134406868882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4096354370163,4.59804208866946,1.0803727788321,1.80845781402858,0.544291993210623,0.2562274405697,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96134406868882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Slc38a8 | |short_description=p1@Slc38a8 | ||
}} | }} |
Latest revision as of 14:53, 1 October 2015
Short description: | p1@Slc38a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc38a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:488 |
Association with transcript: | 0bp_to_ENSMUST00000036748, NM_001009950, uc009npr.1_5end |
EntrezGene: | Slc38a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.90e-31 | 9 |
camera-type eye | 1.90e-31 | 9 |
simple eye | 1.90e-31 | 9 |
immature eye | 1.90e-31 | 9 |
ocular region | 1.90e-31 | 9 |
visual system | 1.90e-31 | 9 |
face | 1.90e-31 | 9 |
optic cup | 1.90e-31 | 9 |
optic vesicle | 1.90e-31 | 9 |
eye primordium | 1.90e-31 | 9 |
subdivision of head | 6.81e-26 | 11 |
sense organ | 8.30e-24 | 12 |
sensory system | 8.30e-24 | 12 |
entire sense organ system | 8.30e-24 | 12 |
head | 4.84e-22 | 13 |
ectodermal placode | 4.84e-22 | 13 |
pre-chordal neural plate | 1.64e-09 | 49 |
craniocervical region | 2.09e-08 | 36 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
anterior region of body | 3.94e-07 | 43 |