FFCP PHASE1:Mm9::chrX:136597089..136597122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=279706 | |EntrezGene=279706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=161 | |||
|TSSclassifier=NA | |||
|UniProt=A2AG10,A2AG14,Q497V0 | |UniProt=A2AG10,A2AG14,Q497V0 | ||
|association_with_transcript=0bp_to_ENSMUST00000101212,ENSMUST00000124075,NM_001081668,uc009ukv.2_5end | |association_with_transcript=0bp_to_ENSMUST00000101212,ENSMUST00000124075,NM_001081668,uc009ukv.2_5end | ||
|cluster_id=chrX:136597089..136597122,- | |||
|description=CAGE_peak_2_at_Nup62cl_5end | |description=CAGE_peak_2_at_Nup62cl_5end | ||
|id=chrX:136597089..136597122,- | |id=chrX:136597089..136597122,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.79e-07,3;CL:0000351,8.79e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!6.37e-14!57;UBERON:0000466!1.04e-12!79;UBERON:0002323!1.54e-10!37;UBERON:0004458!1.54e-10!37;UBERON:0003886!7.01e-10!38;UBERON:0002553!2.90e-09!39;UBERON:0000949!6.17e-09!72;UBERON:0001264!1.75e-08!12;UBERON:0003922!1.75e-08!12;UBERON:0002114!1.75e-08!12;UBERON:0003923!1.75e-08!12;UBERON:0003924!1.75e-08!12;UBERON:0003921!1.75e-08!12;UBERON:0005177!2.31e-08!85;UBERON:0001045!2.42e-07!13;UBERON:0000077!3.79e-07!97;UBERON:0005157!5.15e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002323,1.20e-17,37;UBERON:0004458,1.20e-17,37;UBERON:0003886,5.15e-17,38;UBERON:0002553,2.05e-16,39;UBERON:0001264,1.01e-15,12;UBERON:0002369,1.53e-11,7;UBERON:0006858,1.53e-11,7;UBERON:0002075,1.01e-10,19;UBERON:0000949,2.37e-10,72;UBERON:0000007,1.94e-09,8;UBERON:0003296,1.94e-09,8;UBERON:0010133,1.94e-09,8;UBERON:0000473,4.69e-09,14;UBERON:0004176,1.39e-08,17;UBERON:0009196,1.39e-08,17;UBERON:0009117,1.39e-08,17;UBERON:0003133,2.58e-08,24;UBERON:0003135,2.60e-08,15;UBERON:0005177,3.56e-08,79;UBERON:0000991,5.62e-08,18;UBERON:0005564,5.62e-08,18;UBERON:0003101,1.15e-07,16;UBERON:0000079,1.15e-07,16;UBERON:0005156,1.91e-07,26;UBERON:0000990,1.91e-07,26;UBERON:0001894,2.66e-07,10;UBERON:0006222,2.66e-07,10;UBERON:0000358,8.79e-07,3;UBERON:0000307,8.79e-07,3;UBERON:0007010,8.79e-07,3;UBERON:0005631,9.16e-07,3;UBERON:0000478,9.16e-07,3;UBERON:0000158,9.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.563154888606667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659431438650969,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0.569486723196412,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,0.34255163915718,0.258937883647172,2.52351636410202,14.7462527751215,14.0054120023585,12.4532368518272,10.2491395575783,3.41007250693544,1.88499886994513,56.1132576757029,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0,0.945530400839096,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0.938104239924385,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.902072229254653,0.80673409849337,0.22237804384487,0.380451252225118,0.949058123089023,0,1.00534083520108,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.13800740571849,0.799739588268102,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0,0.370191491765402,1.77871576252289,0.500535317148282,0.786235980452812,0.224862112384854,0.608580364165509,0.241177159752417,0.763877555344259,0.863088412352432,0.972811360650212,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.369506380333209,0.757965647081939,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.952174563544055,1.36593553500459,1.10344600874334,0.664394068946325,1.11618338060241,1.14704320301017,0.863424909329478,1.3018415272336,0,0,0,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,1.27746076687442,0.890328018336276,0.651547837414304,0.329940245945071,6.63725691699814,0.485561272309963,4.53485335447127,12.0707251043775,14.1744908582771,12.604841065701,2.32585463851399,7.99774204850512,10.3384239731569,12.6414703174326,5.27093042874994,7.21948802737308,1.02131881726136,1.08036656418786,0.646793418913773,12.6458850668639,32.4532627565361,10.5237602385222,13.1639216481697,5.17590413494819,74.6256031642599,174.549626391788,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,1.62655573701479,0.86404272657441,0,0.87345025498471,0.674321731924103,0.247960367176008,0.26175594198403,0,0,9.01908701894705,1.49516546043979,1.32366792365678,1.16670713006429,1.16243841129958,1.18269287843545,0.58678619322877,1.95306577265925,7.86445083192831,6.52277126230216,2.88030006257865,0,3.04087822935246,0.821687657318618,0.51968329191118,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,107.663187386421,68.6311003062489,140.855193129462,6.76163579112667,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,0.486213434136588,0.419226325255965,0.735374033800057,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0.715308569841963,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,1.12228454331548,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.563154888606667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659431438650969,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0,0.569486723196412,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,0.34255163915718,0.258937883647172,2.52351636410202,14.7462527751215,14.0054120023585,12.4532368518272,10.2491395575783,3.41007250693544,1.88499886994513,56.1132576757029,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0,0.945530400839096,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0.938104239924385,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.902072229254653,0.80673409849337,0.22237804384487,0.380451252225118,0.949058123089023,0,1.00534083520108,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.13800740571849,0.799739588268102,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0,0.370191491765402,1.77871576252289,0.500535317148282,0.786235980452812,0.224862112384854,0.608580364165509,0.241177159752417,0.763877555344259,0.863088412352432,0.972811360650212,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.369506380333209,0.757965647081939,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.952174563544055,1.36593553500459,1.10344600874334,0.664394068946325,1.11618338060241,1.14704320301017,0.863424909329478,1.3018415272336,0,0,0,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,1.27746076687442,0.890328018336276,0.651547837414304,0.329940245945071,6.63725691699814,0.485561272309963,4.53485335447127,12.0707251043775,14.1744908582771,12.604841065701,2.32585463851399,7.99774204850512,10.3384239731569,12.6414703174326,5.27093042874994,7.21948802737308,1.02131881726136,1.08036656418786,0.646793418913773,12.6458850668639,32.4532627565361,10.5237602385222,13.1639216481697,5.17590413494819,74.6256031642599,174.549626391788,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,1.62655573701479,0.86404272657441,0,0.87345025498471,0.674321731924103,0.247960367176008,0.26175594198403,0,0,9.01908701894705,1.49516546043979,1.32366792365678,1.16670713006429,1.16243841129958,1.18269287843545,0.58678619322877,1.95306577265925,7.86445083192831,6.52277126230216,2.88030006257865,0,3.04087822935246,0.821687657318618,0.51968329191118,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,107.663187386421,68.6311003062489,140.855193129462,6.76163579112667,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,0.486213434136588,0.419226325255965,0.735374033800057,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0.715308569841963,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,1.12228454331548,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Nup62cl | |short_description=p2@Nup62cl | ||
}} | }} |
Latest revision as of 15:30, 1 October 2015
Short description: | p2@Nup62cl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nup62cl_5end |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | 0bp_to_ENSMUST00000101212, ENSMUST00000124075, NM_001081668, uc009ukv.2_5end |
EntrezGene: | Nup62cl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.79e-07 | 3 |
trophoblast cell | 8.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
body cavity | 1.20e-17 | 37 |
body cavity or lining | 1.20e-17 | 37 |
body cavity precursor | 5.15e-17 | 38 |
anatomical cavity | 2.05e-16 | 39 |
pancreas | 1.01e-15 | 12 |
adrenal gland | 1.53e-11 | 7 |
adrenal/interrenal gland | 1.53e-11 | 7 |
viscus | 1.01e-10 | 19 |
endocrine system | 2.37e-10 | 72 |
pituitary gland | 1.94e-09 | 8 |
gland of diencephalon | 1.94e-09 | 8 |
neuroendocrine gland | 1.94e-09 | 8 |
testis | 4.69e-09 | 14 |
external genitalia | 1.39e-08 | 17 |
indifferent external genitalia | 1.39e-08 | 17 |
indifferent gonad | 1.39e-08 | 17 |
reproductive organ | 2.58e-08 | 24 |
male reproductive organ | 2.60e-08 | 15 |
trunk region element | 3.56e-08 | 79 |
gonad | 5.62e-08 | 18 |
gonad primordium | 5.62e-08 | 18 |
male organism | 1.15e-07 | 16 |
male reproductive system | 1.15e-07 | 16 |
reproductive structure | 1.91e-07 | 26 |
reproductive system | 1.91e-07 | 26 |
diencephalon | 2.66e-07 | 10 |
future diencephalon | 2.66e-07 | 10 |
blastocyst | 8.79e-07 | 3 |
blastula | 8.79e-07 | 3 |
cleaving embryo | 8.79e-07 | 3 |
extraembryonic membrane | 9.16e-07 | 3 |
extraembryonic structure | 9.16e-07 | 3 |
membranous layer | 9.16e-07 | 3 |